Scophthalmus maximus (turbot): 118313799
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Entry
118313799 CDS
T09850
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118313799 (zfr)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118313799 (zfr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
DUF4484
zf-U1
Motif
Other DBs
NCBI-GeneID:
118313799
NCBI-ProteinID:
XP_035495551
UniProt:
A0A8D2ZDK7
LinkDB
All DBs
Position
3:26963276..26977671
Genome browser
AA seq
1081 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFSHGAAAQYSQQQAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVAVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQNYQDSYSYVRSTAPAVAYDTKQYYQQPTATAAVAAAQPQPSVADSYYQTG
MLNTAPKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPSSTFSIYPVTSTVQPAAASVVPSY
SQSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQQQQKQAVAAAAATAAWTGNT
FTKKPPFQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQS
SSSNSSSGGGALARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPS
TEPSMVTQTSSSTTAAPSKTTSSTLSSSGSTGSLCVSASSSPATSSSAPYLKPVNIVSSG
VTGVKNALVNNLSAANSASAGKKVNAPKINFVGGNKLQTTVKMDEARSEAKVDSSKPATP
SSGAQDLKTEVSDSLSLAGLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAK
EMHLKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRM
EMRRYEEDMYWRRMEEEHHWDDRRRVPDGGFPQGPPGPPGLLGVRPGMPGLQPQGPVPPR
RPDSSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKDKDKDKEEDQ
EKKDSCKDRALKGVMRVGVLAKGLLLRGDTNVNLVLLCSEKPTKDLLSRIVEHLPKQLTL
VTPEKYEVQGSVQEAAIILTSGAEPKMQVTITLTSPVIREESGRDGDVTSGMVKDPADVL
DRQKCLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSSFPGWAMELLVEKA
ISSASAPLSPGDALRRVFECISSGILLSGGPGLMDPCEKKSVDTLTPMGEQQREDISSSA
QFALRLLAFRQIHKVLGMDPLPQMNPRFNVRNSRKRRRDNSDGTDSFEGEGKKDKKDYDS
F
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtcccgtagtgtccttcacctatgtgcccagccggctcggtgaagat
gccaagatggctaccggcaattactttggattcagccacggcgctgccgcccagtacagt
cagcagcaagcggcaggggttgcctacacgcaccccaccacggtggccagttacacggtg
catcaggctcctgtggcggctcacactgtggcggcagcctacgctcccactgcagccaca
gtagctgtagccaggcctgcgcccgtcgccgtggcagctgccactgctgcagcgtatgga
ggataccagccaacccatgctgccactgactatggctaccctcagcgccagcctgaagtc
cctccaccacccccacccgtcacctcgcagaactaccaggactcttattcatatgtccgc
tccaccgctccagccgtagcctacgacactaagcagtattaccagcagcccactgctaca
gcagctgttgctgctgcgcagccacaacccagcgtggcagattcttactaccagacaggt
atgctaaatacagcccccaaaccaggatacagccagggggtaacatcatacacccagagc
cagcagacgcgacaggtgactgtgatcaagccagccgctcccagtccctcatccaccttc
tccatctatccagtgacctccaccgtccagcctgctgctgcctctgtggtcccctcgtac
tcccaaagcccaacctacagcactaatgctgtcacctactctggaacctcgtactcgggc
tatgaagcagcagtttactcggcagcctccagctactaccagcagcagcagcagcagcag
caacaacagaagcaggcggtggcagctgcagcagcaacagcagcgtggacggggaacact
ttcaccaagaaaccccccttccagagtaagcagctccggcccaaacagccgcccaagccc
cctcagatccactattgcgatgtctgtaagatcagctgtgctggcccacagacgtacaag
gagcatttggaggggcagaagcacaagaagaaggaggcagcgctgaaggtttcccagagc
agcagcagcaacagcagtagtggtggtggggctttggcccgcaatgctcagaaccagctc
cgctgtgaactgtgtgatgtttcctgcactggcgctgatgcctatgccgcccacatccgt
ggagccaagcaccagaaggttgtgaagctccataccaaacttgggaagcccattccatct
actgagcccagtatggtcactcagacatcttcctccaccacagcggctcccagtaagacc
acctcatccaccctgagcagttcaggcagcaccggctctctgtgtgtgtctgcttcctcc
tcccctgccaccagctccagcgccccctacctgaagccagtcaacatagtcagcagtggt
gttacaggcgtcaagaacgctctcgtaaacaacctctctgctgccaactctgcctcagct
gggaagaaggtcaatgcccccaagatcaattttgttggtggcaataaattgcagactaca
gtaaagatggacgaggccagatcagaggccaaagtggattcttctaaacctgcgacaccc
tcttcaggtgctcaagacctcaagactgaggtgtccgattctctgtccctggctggactg
cagagtgacgtccagccggtcggtcacgactatgttgaggaagtcaggaatgatgaaggc
aaagtcatccgcttccactgtaagctgtgtgaatgtagtttcaacgaccccaatgcaaag
gaaatgcatcttaaaggtcgaaggcatcgcctgcaatacaagaaaaaggtgaacccagat
ctgcaggtggaagtcaagcccagcatccgggcaagaaagattcaggaagaaaagatgagg
aagcagatgcagaaagaggagtactggagaagaagggaggaggaagagcgctggagaatg
gagatgaggcgttatgaagaagacatgtattggagacgtatggaggaagagcaccactgg
gacgatcgacgccgtgttccagatggaggcttcccccaggggcctcctggccctcctggg
ctgctcggagtccggcccggcatgcctggcctgcaacctcaggggcccgtgcccccacgg
cgtcctgattcttcagatgatcgctatgtcatgaccaagcacgccgccatctacccttca
gaggatgagctccagtccatccagaagatcgtgtccatcacagaacgggccctcaaactg
gtctctgacataatcacagaccaggacaaggataaggataaggataaggaagaggaccag
gagaagaaagactcctgtaaagacagagccctgaagggagtgatgagagttggagtcctg
gccaaaggcctgctcctgcgtggagacacgaacgtcaacctggtcctcctctgctctgag
aagcccaccaaggacctgctcagccgcatagtggagcacctccccaaacaactaacactg
gtaacaccagaaaagtacgaggtccagggctctgtccaagaagcagccatcatcctgaca
tcaggtgccgagccaaagatgcaagtgacaatcacgctgacttcacccgtcatcagagag
gagagcggccgggacggagatgtaacctcgggtatggtgaaagacccagcggacgtcttg
gacaggcaaaaatgccttgacgctctggctgctctgcgccacgctaagtggttccaggct
agagctaatggacttcagtcctgtgtgatcatcatccggatcctgagagacctctgtcag
cgagttcccacgtggtcatccttccccggatgggccatggagctgctggtggagaaggcc
atcagcagcgcctccgcccccctcagccccggtgacgctctgagacgggtctttgaatgt
atctcctctgggattctactctccggggggccgggtctgatggatccctgtgagaagaag
tcagtggacacactcacccccatgggggagcagcagagagaagacatcagctccagtgcc
cagttcgctctgaggctgctggcgttccgtcagatccacaaagttctgggcatggaccct
ctgccacagatgaaccctcgcttcaacgtccgcaacagccgcaagcgtcgccgtgacaac
agcgatgggacggacagctttgagggtgaaggcaaaaaagacaagaaggactacgatagt
ttctaa
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