Scophthalmus maximus (turbot): 118313879
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Entry
118313879 CDS
T09850
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118313879 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
118313879 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118313879 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118313879 (gtf2h2)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118313879 (gtf2h2)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118313879 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
118313879
NCBI-ProteinID:
XP_035495741
LinkDB
All DBs
Position
3:complement(25687657..25692811)
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHEQVRLGMMRH
LYLVIDCSRSMEDQDLKPNRLTSSLKLMEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
TGNPKKHTAALKKAVDTVCAGEPSLYNSLSLAIQSLKHMPGHTSREILIVLSSLTTCDPG
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGFYHVILDESHFKELLMMHVKPPP
ASSSSECSLIRMGFPQHVLAALTDQDAKPSFSMSHLEGGSGGPGLSLGGYFCPQCHAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLQAFVESPMQELQGDRFCQACEGELKDKRIFT
CPSCHGVFCTECDLFIHDSLHCCPCCIHSHIGP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaaacgctgggaaggcggctacgagaggacatgggaa
gtgctgaaggaggatgaatctggctcactcaaagccacagtggaagagatcctgttccag
tccaaaaggaaaagggtgatcgaaagccatgaacaagtgaggcttgggatgatgcgacac
ctctatttggtgatcgactgttcgagaagtatggaagaccaggacctgaaaccgaaccgc
ctcacctcctctctgaagctgatggaagcgtttgtggacgagtattttgaccaaaacccc
atcagtcaggtcggcatcatcaccacaaagaacaaaagggctgagaagttgactgacctg
acaggaaacccaaagaaacacactgctgctctgaagaaagcagtggacaccgtgtgcgca
ggagagccgtccctgtacaactctctcagcctggccatacagtcgctcaaacacatgcct
ggacacacaagccgggagatcctgatagtcctcagcagcctcaccacatgcgacccaggc
aatatctacgaactgatcaagaccctgaagtcgctgaaggtgcgggtgtcggtcatcggc
ttgtcggcagaggtgcgggtgtgtacggtgttgaccagggagactggcggcttttaccac
gtgatcctggacgagagtcacttcaaagagcttctgatgatgcacgtcaaacctccccca
gccagctcctcctccgaatgctctttaatacgcatgggttttcctcagcacgtgctcgct
gctctgaccgaccaggacgccaagccctcgttcagcatgtctcacctggagggcggcagc
ggcggtccaggtctgtctctgggagggtacttctgtccgcagtgccacgccaagtacacg
gagcttcccgtggagtgtaaagtctgtggtttaactctggtgtcggccccccacctcgcc
agatccttccaccacctcttccccctccaggcctttgtggagagtcccatgcaggagctc
cagggagacaggttctgtcaagcttgtgaaggggagctaaaggataaacgtatattcacc
tgtccatcgtgtcacggcgtgttctgtacggagtgtgacctcttcatccatgactcgctc
cactgctgcccctgttgcattcacagtcacatcggcccatga
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