KEGG   Scophthalmus maximus (turbot): 118313998
Entry
118313998         CDS       T09850                                 
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118313998
   03400 DNA repair and recombination proteins [BR:smau03400]
    118313998
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    118313998
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     118313998
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N UBA_RAD5A UBA_4 Methyltransf_32
Other DBs
NCBI-GeneID: 118313998
NCBI-ProteinID: XP_035495937
LinkDB
Position
19:complement(12237982..12252322)
AA seq 1199 aa
MMTSVVSNPARGTRDRTLPSTTQTTQPQKQIQATAEQLRLAQVIYDNNDADFEDKVKQLI
EVTGKTQDECMVALHDCNEDVNRAINFLLESHSDTNSWETVGKKRNLGKEGGTSEIKESR
ERKGGEREASRGRGGSNRRGRGISRGREGRFEENGFEVAPGERGGDRGRRGRGRGPGVRG
RGRAAVGNRFSSQGMGTFNPADYTANSGARQETWEGDGNEPAEAPGTWVGNVEDWTSEDW
NEDLSETKVFTASSAPGNNVDMSGLLPKAGVAVGCSMDSDLGAIVDGPSAEDLGQSLVFT
NSHHNGRTATHSYAHATANSYAHAASASTTYAHAALSSVLGSGFGSLNGPKPTSPLDSRT
SEQLNGPRLGQRASQTLANTTSSSSSNVSKDAGPLPMQSPAPASFPSLDIKAQRVENSPV
TAQNLELKLQPEPSAVLSQLAQRQQQSTILSTTESLGLSQSHVPQVPTPPGHESSVQPLR
DGASPGLKLQGMDPPNTEAPQRQLKTQRRRVPPPSKIPSSAVEMPGSADMSGLNFQFGAL
DFGSEAGSGTVDMAHMELPREQAPTQAPAPAAAAPMSVPTTVPTQHPQSSLFPKPGSVGE
HMSSLPSISSGVSDPSFPSPSLGLPSATPSPSLGLPCAATPPSCAAPTTTSRSESSGQRS
LPPHLGFSQSKDVTSAGAGPLTNGYSGMKTQSIQDNTSSSSRTVKTESPVMTSDSGPGHH
IPSPAVTPSHSTPIPSLSSHVTSNHPPGAALATSSSLTHQISHEESSSSSGNLHAFSSSS
SSQVVNPNPSVPLAVSSSIMNGLHPSGAPGLTQNGTNTSLSVSGSRTAPLLTATSGKAPP
NLAQGVPPLLANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPMDYYGVTFPGTTAAMAAR
DGLANNPYSGEATKFGRNDSSSPAPPTSLSTAGVQSQPQQALQAGTQGQGAVQSQGQQTQ
NQAFLNPPLPPGYGYTGLPYYAGMPGVPSAFQYGPTVFVPPASAKQPAMGMANPSNQYHQ
QHQPSYGQHAYSTAFDDLSQAHAGEYSKGGYGGSAQSQAKSAGGGPGKDDSTVKSVLERA
PGLSGSGTSGGVPDMGGSIYSKTQSFDKQGFHTGTPPPFSLPSALGGTGPLNPGGAPGYA
PAPFLHILPPHQQPHSQLLHHHLTQEGQGGPGQRGQSSSMQQKTQGSKSSYGSSPYWAN
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgatgacttcagtggtcagcaatccagcccggggaactcgggacagaacgctgcccagc
accacacaaacaacacaaccacagaaacagatacaggccacagcagaacagcttcgttta
gcccaagtgatctacgacaacaatgacgctgactttgaagacaaggtcaaacagctgatt
gaggtaactgggaagactcaagatgagtgcatggtagccctccatgattgcaacgaagat
gtaaacagagccattaatttcctgctggagagccactctgacacaaactcctgggagacc
gtggggaagaagcggaacctcgggaaagaaggaggaacttcagagataaaggagagcaga
gaaaggaaaggaggagagagggaggccagtcgtggacgtggaggctccaacaggaggggc
agaggaatcagccgagggcgtgaaggtcggtttgaggagaatgggtttgaggtggctcct
ggagagagggggggtgaccgtggacgcagggggcgaggcagagggccaggggttcgtggt
cggggaagagcagctgtaggcaacaggttctcctcccagggaatgggcacgttcaatcct
gctgactacacggctaactctggagctcgccaggagacatgggaaggggacggcaacgag
cctgctgaggcacctggaacatgggttggcaatgtggaagactggacttcagaagactgg
aatgaggatttgtctgagaccaaagtattcactgcgtcttctgctccaggaaataatgtg
gacatgagtggcctactgccaaaggctggagtggctgttggatgttccatggactctgac
ttgggggcaattgtcgatggcccctcagctgaggatttgggccaaagcctggtgtttacc
aattcccaccacaatggacgcactgcaacacacagctatgcacacgccacagccaacagc
tacgcccatgccgcctctgctagtaccacctatgcacacgctgcactgtcatcagtcctg
ggctctggttttggttctctgaatggacctaagccaacatctccccttgactccaggaca
tcagaacagctcaatgggcctcggcttggtcagagagccagtcaaacgctggcaaacacc
accagcagcagcagcagtaatgtttccaaagacgcagggccacttccaatgcaaagtcct
gctcctgcctcctttccctctttagacatcaaggctcaaagagtagagaacagccctgtt
actgcccaaaacttggagctgaagcttcagccggagccatcagcggtgctcagtcaactg
gctcagaggcaacaacagtccaccatcctctccaccacagagtctttgggcctgtctcag
tcgcatgtgccacaggtccccacacccccaggtcatgagtcctccgtccagcctctaaga
gatggagcttctcctggactgaagctgcagggcatggaccctcccaacacagaggcccct
cagcgacagctaaagacccagagacgcagagtacctcctccttcaaagatcccgtcgtcg
gcagtggagatgccaggctcagcagatatgtctggcctgaattttcagttcggagctctt
gactttggatctgaggccggtagtggaacagttgacatggcacacatggagttgcccagg
gaacaagcccccactcaggccccagctccagcagctgcagcacccatgtctgtccccacc
actgttcccacacagcacccacagagcagcctgttccccaagccaggatctgtgggcgaa
cacatgagcagtttgcccagtatatcctcaggcgtgtcagaccccagcttcccctcacca
tctttgggcttgcccagtgccacaccctcaccgtccctgggtcttccttgtgctgccact
ccaccctcttgtgcagcccctaccacaaccagccgttcggagagcagtggccaaaggtcc
ctgccacctcatcttggcttctcacagagcaaagatgtcacatcagctggtgctggacct
ctcaccaatggctacagtgggatgaagacacagagcatacaggacaatacgtcatcatcg
tctagaacggtgaaaacggagtctcctgttatgacgagcgatagtggccccggtcaccac
atcccttcccctgcagtcacaccttcgcactcaacacccatcccttcgctcagcagtcac
gtgacgagtaatcacccacctggagccgcccttgccacaagttcatccctgacgcatcag
ataagtcatgaggagagcagtagcagcagtggaaaccttcatgccttttcatcatcatcg
tccagccaagttgtcaatcccaacccttcagtccccctggctgtaagcagctcaatcatg
aatggtcttcacccatctggagcaccaggacttactcagaatggcacaaacacctcactc
tcagtttcaggcagccgcacagcaccgctgctcaccgccacctctggtaaagctcctccc
aatttggctcaaggagtgccgcctcttctggcaaaccagtacatcatgggccccggaggc
ttgctccctgcttatccgcagatctatggatacgaggacttgcaaatgctgcaatctcgc
cttccaatggactattatggtgtaacattccctggaactacagctgcaatggctgcaaga
gatggcctcgccaataatccatattctggtgaggcaacaaagtttggtcggaatgactct
tcatctccagctccaccaaccagcctgtctacagccggggtgcagtcgcagccccagcag
gcactgcaggcagggacacagggccagggcgcagtgcagagccagggtcagcagacacag
aaccaggccttcctcaacccgcccctgccccccggctatggatacactggtctgccatac
tatgctggtatgcccggggttccctcagccttccagtatggccccaccgtctttgtgcct
cctgcttcggccaaacaacctgcaatgggaatggccaacccctccaatcagtatcaccaa
cagcatcagcccagttacggacaacatgcatatagcacagcctttgatgacctctctcaa
gcccatgctggggagtacagtaagggaggttacggaggctctgcccagtcacaggccaag
tcagcgggcggcggcccagggaaagatgattctactgtcaagagtgttctggagagagca
ccaggactgtcgggctcaggtaccagtggaggagtacctgatatgggaggttcaatctac
agcaaaacacagtcatttgacaagcagggcttccacacagggacaccacctcccttcagc
ctgccttcagcactcgggggaacagggcccctgaaccccgggggtgctccaggctacgcc
cctgctcccttccttcacattctgccaccgcaccaacagccccactcccagctgctgcac
catcacctcacacaggagggacagggtggacctggacagcgtggtcagtccagcagcatg
cagcagaaaacccaaggcagcaagtccagctacggcagctccccctattgggccaactga

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