Scophthalmus maximus (turbot): 118314124
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Entry
118314124 CDS
T09850
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1 isoform X1
KO
K13129
survival motor neuron protein
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118314124 (smn1)
Spliceosome [BR:
smau03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
118314124 (smn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
PML_CC
DUF3226
Tudor_2
Mn_catalase
Motif
Other DBs
NCBI-GeneID:
118314124
NCBI-ProteinID:
XP_035496191
LinkDB
All DBs
Position
19:complement(16249115..16253253)
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AA seq
292 aa
AA seq
DB search
MANGCKEVLFSRGSGQVSRGAQREPESDDSDIWDDTALIKAYDKAVVSFKTALKSEDEPP
ASKKNQPGKKRKNNKKNQSRKRTNAPPDKVWQVGDSCCAYWSEDGQLYAATISAMDETRD
TCTVVFTGYGNEEEQNLEDLLAELSEGDDETDAKVKEAESSTEESESSAANKPKQQPHSK
AQKSKAHKEPPPMWAAGFPGFPPCPPPTHAFRQKGSRQSGAHGPIPPSWPPMMPFGPPMI
PPPPPMSPDMMDDEALGSMLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggctgtaaagaagtgctgttcagccgcgggtccggtcaggtgagtcgcggc
gcacagagggaacccgagagcgatgattcagacatatgggatgataccgcgctgataaag
gcgtacgacaaggcagtggtgtcattcaagactgccctcaagagtgaagatgagccaccg
gcctcaaagaaaaaccaaccaggaaagaaacgcaaaaacaacaaaaagaaccagagcagg
aaaagaaccaacgcaccgcctgataaagtgtggcaggttggggactcgtgctgtgcttac
tggtcagaggacggccagctctatgcagccaccatctccgccatggacgagacgagggac
acttgtacagttgtctttacaggctacggcaacgaggaggagcagaaccttgaagacctg
ctcgcagagctctctgagggtgatgacgaaacagatgccaaggtgaaagaagcagaatcg
tcaacagaggagagtgagtcatccgctgcaaacaagcccaaacaacagccacacagtaaa
gcccagaagtccaaggcccacaaagagccccctccgatgtgggctgctggcttccccggg
tttcctccatgcccacctcccacgcatgctttcagacagaagggaagcaggcaatctggt
gctcatggacctatacctccttcctggcctcccatgatgccttttggtccaccaatgatc
cctccacctccaccgatgagccccgacatgatggatgacgaggccttgggcagcatgctc
atctcctggtacatgagtggatatcacacaggatactacctgggtttgaaacaaggtcgc
aaagaagctgccaactggacaaaactgcaccacaaatga
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