Scophthalmus maximus (turbot): 118314268
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Entry
118314268 CDS
T09850
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118314268 (cacna1ba)
04020 Calcium signaling pathway
118314268 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118314268 (cacna1ba)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118314268 (cacna1ba)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
118314268
NCBI-ProteinID:
XP_047187141
LinkDB
All DBs
Position
3:25290417..25389524
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AA seq
2224 aa
AA seq
DB search
MFDSCVQGPHTHLQDPGRRATARVMMLHLHSSSAATDALHSRYGGPCAGGPAMGAGRQPG
APGAPRVYKQTMSQRAKTMAFYKPIPVKRSCLSVNRSLFIFGEDNVIRKYAKKITEWPPF
EYLILATIIANCIVLALEQHLPASDKTPMSERLDDTEPYFIGIFCFEAGIKIIAQGFAFH
KDSYLRNGWNVMDFVVVLTGILATVGADFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIM
KAMVPLLQIGLLLFFAILMFAIIGLDFYMDKFHRTCFRIDTGEQAADFPCGLEAPARTCA
NGTTCTEYWTGPNFGITNFDNILFAILTVFQCITMEGWVDILYHANDASGNTWNWLYFIP
LIIIGSFFMLNLVLGVLSGEFAKERQRVEKRQEFLKLRIQQQIEKELTGYLEWICKAEEV
MLAEEDKKSVDGAWYKRKHNSSVLKRTKKSKNDLINAEEGEDHFSSVAPPGNDNSSYFRR
KEKRIRFTIRRLVKSQGFYWMVLCLVGLNTLCVAIVHYNQPDWLTFALYLAEFVFLGLFL
AEMSMKMYGLGAQNYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIF
KVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFEKKPPTTNF
DTFPAAILTVFQILTGEDWNAVMYQGIESQGGVHRGMFSSIYFIILTLFGNYTLLNVFLA
IAVDNLANAQELTKDEEEQEEAINKKLALQKAKEVKEVSPMSAANISITAFLTRSRGNAH
SSSSSICSVNSLKEQQKSAKTVSVWEQRANQLRRHNQASCEALYSELEPEERLRLSSALN
IRPDMKTHHDRPLIVEPHDGPVLAGHQHHHHKPCMPEEAETTPDPPAPYQPRRHHRHRDR
DNGDTGGRHHVHHSRSKDHDGSRGKEGKSERSRSREGGRKHHHQNSVDESGGGGVASERE
HRHHHSHRQSRGGNGTVSSGGKGDKKSRHKDGRYSNRDGDRNSRGESGANGERRRHRTHG
SRGQSTVEGVESNEREKTHGHRDGFGDSEGESLAVSPQQASGDRPEDSDNQRNVRRSGQT
SGQVPPVTVTSPPGETTLIQMNSIDSETMPMTEKTLEDLGQSGPKPILPYSSMFIFGQSN
PVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTNAPRNNVLKYLDYAFTGVFTFE
MVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGSQQGVTRGTKGKDIST
IKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKG
KFFSCTDESKGLEKDCKGQFLKYDDDKVAAMPRDWEKYDFHYDNVLWAFLTLFTVSTGEG
WPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVFFVVFPFFFVNIFVALIIITFQEQGDKA
LSECSLEKNERACIDFAINAKPLTRYMPKDTQSFQYRMWKFVVSPPFEYSIMIMIALNTV
VLMMKFHGAPDFYVAMLKKLNIVFTTLFSLECVLKIIAFGPLNYLKDAWNVFDFVTVLGS
ITDILVTEINTTGRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLI
AMLFFIYAIIGMQVFGNIKLNEDTEINHHNNFRTFLQALMLLFRSATGESWHEIMLSCLS
HRACDERSGSHGKECGSDFAYFYFVSFFFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPH
HLDEFIRVWAEYDPAAWGRIKYPDMYQMLLRMSPPFGLGKKCPPRVAYKRLVKMNMPIAD
DNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWPNLSQKTMDLLVTPHK
PNELTVGKVYAALMIFDYYRQNRARRQQQQQQQPNASGSQGMVGALFTPLLPQSRAPERV
LPAARNSAELAGVPRPQPQSHAKSQPPSRPSSNSLDNGGTLPAHHRSIKVSSSWVMEKPK
EVSRARAQRSMSRGPSEDTPDTAIIQESVEMRTMETGGGSTIPVPGSGLENQGRAASMPR
LSAELQWGHSRCSPGIHLDSVPDASPMKRSASTVAPQRPQEVNLRDYTLEKPSQERPHHH
HHHHRCHHRRDREKDRDREKRQRSLDTPLGGQPPGSAGEPASDPAACRERAHDRGRSHER
KHHHSSADRQRYFSCDRFCSRERCHSKSAAASCAASPGEGQETGDKQVGRAPECRVGTGE
ASDF
NT seq
6675 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactcttgtgtccagggaccacacacacacctacaggacccggggcgccgggcg
accgcccgtgttatgatgcttcacctccactcgtcttctgctgccactgacgccctgcac
agccgctacggaggcccctgtgccgggggccccgccatgggggccggccggcagccgggg
gccccgggggccccgcgggtgtacaagcagacgatgtctcagagagccaagaccatggcc
ttttacaaacccattccggtcaaacggagctgcctcagcgtcaaccgctccctgttcatc
ttcggcgaggacaacgtcatacggaaatacgccaaaaagatcacagaatggcctccattc
gagtacctgatcctggccaccatcatcgccaactgcattgtgctggccttggagcaacac
ctcccggcctcggacaaaaccccgatgtcggagcgtttggacgacacagagccctacttt
attggaatattttgtttcgaggccggtatcaagatcatcgcccagggctttgccttccac
aaagactcctacctacgtaatggctggaatgtaatggactttgtggtggtcctaacaggg
atcctggccaccgtgggggctgattttgatctgagaacactgagggcggtgagagttctg
cggccgctcaaactggtctctggcattccaagtctgcaggtggtgttgaagtccatcatg
aaggccatggtgccgctgctgcagatcggcctgctgctcttcttcgccatcctcatgttc
gccatcatcggcctcgacttctacatggacaagttccatcgcacctgcttcaggatagac
acaggcgagcaggcagccgatttcccctgtggcctggaggctccggcgaggacctgtgca
aacggcaccacctgcacggagtactggaccggacccaactttggcatcaccaactttgac
aacatcctcttcgccatcctcaccgttttccagtgcatcaccatggagggctgggtggac
atcctctaccacgccaacgatgcctcagggaacacatggaactggctctacttcatccca
ctcatcatcatcggctccttcttcatgctcaacctggtgctgggcgtgctatcgggggag
tttgccaaagagagacaacgggtagagaagagacaagaattcctgaagctgcgcatacag
cagcaaatagagaaagagttgactggatacttggagtggatctgcaaagcagaggaggtg
atgctggccgaggaagacaagaaatctgtggacggcgcttggtacaagagaaaacacaac
agctcagtgctgaagcggacaaagaaaagtaagaatgacctcatcaatgcagaggagggc
gaggaccacttctcatctgttgcccccccagggaacgacaactcgtcttacttcaggcgg
aaggagaagaggattcgcttcaccatccgccgtctggtcaagtcgcagggcttctactgg
atggtgctgtgcctggttggcctcaacacgctgtgtgtcgccatagtgcactacaaccag
cccgactggctcacctttgccctatacctggccgagtttgtattcttgggcctgtttctg
gcagagatgtccatgaagatgtacgggctcggagcgcagaactacttccactcctcgttt
aactgtttcgactttggggtgatcatcggaagtatttttgaggtgatctgggctgccatc
aaacctggggcctctttcggtattagtgtcctgcgagctctgagactgctcaggatcttc
aaagtcaccaagtactggaactctctgaggaacctggtggtttccctgctcaactccatg
aagtccatcatcagcctgctgttcctcctcttcctcttcattgtggtcttcgccctgctg
ggcatgcaactgttcggcggcctgtttaattttgaaaaaaaaccgccgaccactaacttt
gacacgttcccggcagcgattctcaccgtcttccagatcctcaccggggaagactggaac
gctgtcatgtaccaagggatcgaatcacaggggggcgtccacagggggatgttctcctcc
atttacttcatcattctcactctcttcgggaactacacacttctcaacgtcttcttggcc
atcgccgttgacaacctcgcaaatgcccaggagctcactaaggatgaagaggagcaagag
gaggccatcaataagaaacttgccctccagaaagccaaggaggtaaaggaggtcagcccc
atgtcagccgctaacatttccatcacagcttttctaacacgcagtcgaggtaacgcgcat
tctagcagctcatccatctgcagcgttaactcacttaaggagcagcagaagtcagcgaag
acggtgtcagtatgggagcagagggccaaccagctcagaaggcacaaccaggcgagctgc
gaggccctgtacagtgagctggagcccgaggagcgtctccggctgtcctcggccctcaac
atccggcccgacatgaagacccaccacgaccggccactgattgttgagccccacgacggg
cctgtgctggcaggccaccagcaccaccatcataaaccctgcatgccagaagaggctgag
actacccctgaccctcctgcaccttaccagcctcgccgccatcaccgacacagagaccgg
gataacggtgacactggcgggaggcaccacgtccaccacagtcgctccaaagaccatgat
ggcagccggggcaaagaggggaagagcgagagatcccgcagccgagagggcggcaggaaa
catcaccaccagaattcagtggatgagagcggaggcggaggagtcgcgagcgagagagag
caccgtcatcatcattcacatcggcagtcccggggaggcaacgggacagtgagcagtggt
gggaagggggacaagaagtcccggcacaaagatggccgctattctaaccgagacggggat
aggaattccagaggagagagtggtgccaacggagagaggaggaggcatcggactcatggg
tccaggggccaatccacagtggagggagtggagtccaacgagagagagaagacccatggc
cacagggacgggtttggtgactcagagggggagtccctggccgtctctccccagcaggcc
tctggcgaccgaccagaggactcggacaaccagcgtaatgtcagacgatccggccagacg
tctggccaagtccctcctgtgacagtcacctccccacccggagagaccaccctcatacaa
atgaacagcattgactctgagacgatgcccatgacagagaagaccctggaggatctgggt
caaagtggacccaagcccatcctgccttacagttccatgttcatcttcggacagagcaat
ccggtgaggcgcttgtgtcactacattgtgaccttgcgttattttgagatgtccatcctc
gtggtcatcgctatgagcagcattgctctggcggcggaggaccccgtctggaccaacgcc
cctcgcaacaacgtgcttaaatatctggattatgccttcactggtgtattcacttttgaa
atggtgatcaagatggtggacctgggcctgctgctgcatcccggagcctacttcagagac
ctgtggaacattctggatttcatagtggtcagtggggcgctggtggcttttgcattttcg
agcttcatgggatcgcaacaaggtgtgaccaggggcaccaaaggcaaggacatcagcacc
atcaagtcactgagggttctgcgggttctcaggcccctcaagaccataaaacgcctgccg
aaattaaaggcagtgtttgactgcgtggtcaactcgttgaagaacgtgctgaacatcctc
atcgtctacatcctcttcatgttcatcttcgccgtcattgcggttcagctcttcaagggg
aaattcttctcctgcacggatgagtccaagggcctggagaaggactgcaaaggacagttc
ttgaaatacgacgatgacaaagtagccgccatgcccagagattgggagaagtacgacttc
cattatgacaacgtgctgtgggccttcctgaccctcttcaccgtctccaccggggagggc
tggccgactgtgctgaagcactctgtggatgccacctttgaagaccagggtcccagtcca
ggctaccggatagagatgtccatcttctatgtggtcttctttgtggtcttccctttcttc
ttcgtcaacatcttcgtcgctctgatcatcatcacgttccaggagcagggggacaaggct
ttgtctgagtgcagcttggaaaagaatgagagggcttgcattgactttgccataaacgcc
aaacctctgacgcgctacatgcccaaggacacgcagtccttccagtacaggatgtggaag
tttgtggtctcgcctccgttcgagtactccatcatgatcatgattgctctcaacactgtg
gtactcatgatgaagttccacggagctccggacttctatgtagcgatgctgaagaaactc
aacatcgtcttcaccactctcttctctctggagtgcgtcctcaagatcattgcttttggt
ccactgaactacctgaaggacgcctggaacgtgttcgactttgtgacggtgttgggcagc
atcaccgacatcctggtgacggaaattaacactacaggcaggctgctgaacctgagcttc
ctgaggctgttccgagccgctcggctcatcaagctgctgaggcagggctacaccatccgc
atcctgctgtggaccttcgtccagtccttcaaggccctgccttatgtctgcctgctgatt
gctatgctgttcttcatttatgccatcattgggatgcaggtgtttggcaacattaagctg
aatgaagacacagaaatcaatcaccacaacaacttccgcacgttcctccaggctctcatg
ctgctgttcaggagtgcgaccggcgagtcctggcacgagatcatgttgtcgtgtttgagt
caccgagcctgtgacgagcggtcggggtcccacgggaaggagtgcggcagcgacttcgcc
tacttctactttgtctccttcttcttcctctgctccttcctgatgctgaatctgttcgtg
gccgtcatcatggacaacttcgagtacctcacgagggactcctccatcctgggacctcat
cacctcgatgagttcatccgggtttgggccgagtatgacccggctgcgtggggtcgcatc
aagtaccccgatatgtatcagatgctgctccgcatgtccccgccctttggtttgggaaag
aaatgtccgccaagagtcgcctacaagcgtctggtgaaaatgaacatgcccatcgccgac
gacaacaccgtccacttcacctccaccctgatggccctgattcgcaccgccctcgagatc
aagctggcctcaggtatggtcgctcagcggttgtctgacgccgagttgaagaaggagttg
tccacggtgtggcccaacctctcacagaagaccatggacctgctggtgacgccgcacaaa
cccaacgaactgacggtggggaaggtgtatgccgccctgatgatcttcgactactacagg
cagaatcgggcgaggaggcagcagcagcagcagcagcagccgaacgcgtccggctcccag
ggcatggtcggggctctgtttacgccgctgctgcctcagagtcgcgcgccggagagagtc
ctgccggcggcgcggaacagcgcggagcttgccggcgtgccccggccgcagccccaatcc
cacgccaagtcccagccaccgagcaggcccagctccaactccctcgacaacggaggcacg
ctgccggcacaccatcgcagcatcaaggtgtcctcctcctgggtgatggagaaacccaag
gaagtgtcccgggccagggcccaaagaagtatgtcccggggcccgtcggaggacacgccg
gacacggccatcattcaggagtcggtggagatgaggacgatggagaccggcggcggcagc
acaatccccgtccctggctcaggtctggagaaccagggcagagctgcttctatgccacga
ctcagtgccgagctgcagtggggccactcgcgctgctctccggggattcatcttgactcc
gtccccgacgccagtcccatgaagcgctcggcctccaccgtggccccgcagcgaccccag
gaggtcaacctgagggactacaccctggagaaacccagccaggagcgaccccaccaccat
caccaccaccaccgctgccaccaccgcagagaccgggagaaagacagagaccgggagaag
aggcagaggtctttggatacgcctttgggcggacaacctccaggctctgctggagagccg
gcgtccgacccggccgcctgcagggagcgggcccatgaccgcggacgctcccacgagagg
aaacaccaccactcgtcggcggacaggcagcgctacttctcctgcgaccgcttctgcagc
cgggaacgctgccacagcaaatccgccgccgccagctgcgccgcctcccccggcgagggg
caggaaaccggcgacaagcaggtggggagggcgccggagtgtcgagtagggacaggcgag
gcttcagacttctag
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