Scophthalmus maximus (turbot): 118314319
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Entry
118314319 CDS
T09850
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118314319 (snapc4)
03021 Transcription machinery [BR:
smau03021
]
118314319 (snapc4)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
118314319 (snapc4)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
118314319 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
118314319
NCBI-ProteinID:
XP_047185169
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All DBs
Position
19:885505..898260
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AA seq
1127 aa
AA seq
DB search
MSVSLSEERDRIQRQVEELEQSLSVTHGDLQLLSSETDDESGSDDTEVRQSAAGLLSQRE
KIKRDIENLENVLRPHSPVCVSDDDSSSSSSDESELGLSLSVDSCLQMNLVYQQVLQETL
GQLETLLSHNHRQQKELVSQMSGPIKEPRQQTAPSSYQLPINMYLGRFLKPYFKDKLTGL
GPPANQETREKTSRMTGCLDDKKVKTKRWESWQKTLLIHAVSRDGLRRLIQPKLSRVDYL
SLKLSSAEETDRQQLREQIDRLEREIDLLRGKKGEELIGDRYEEHDWQKISNIDFEGTKE
ADDVRSFWQNFLHPSIRKCPWSRDEVQVLRDESQRHKDRHWEGIAHNLGTGRTAFMCLQT
FQRFVSTSLRRSTWTPDEDDLLRMLVDKMRIGNFIPYTQMSYFMEGRNPAQLIYRWNQVL
DPSLKKGPWTKDEDELLLQAVSHHGEKNWWKIRLEVPGRTDSSCRDRYQDCLKSGRKRGA
FDEQERNLLLLLVQKHGVGRWAKIAAEIPHRYDAQCLREWRKVSRPRPCPPQRGGEKKKR
TRRKMKPEEEEEEEEKHSAPPTLCTPAVGDGVDETRSHVMEIRGRRHATEVKAEATPPVP
SSSLITFPPPSSSQIMSPPLSSSLITSPPPSSSLITSPPPSSSLITSPPPSSSRITSPVN
DHDYAIGPYLTLSQPSPAPKQLNPVHCELNSSKESPPKNHSRGRKRVRGEEQDPVGGASA
GVVQEGKRVRKPTQKARELQEDADAKAKVKKKRMSSPGKSRPEGGAVALPWLGLLPGQSM
WVMTPAGLVQLAEAPPQGLRLALVPCPSVPPPLPTPPLRFTSVIQKPVAPVPLPAPPTCH
YMPVPQTVVLPPVPHPLPPCPPQPPPTLFLPHKVMVRVDQSEAPPLRREALTFDPSLMFL
EPQEAVCDWLSGRGGVVVPGAGVALPYLPPFVSSLTAFSSLLRVKKSLTKSSLQLLRHHP
GTKTRTRTRPDSPPPSDLPDSTSDLRPASDQPGSTPLPAAPVGPDEDEEELVVEVRQLVT
ERFSGNPAYQLLKARFLSCFTVPALLATIQPVAKKTGVCQANQEEEEEELKNIRARGRQR
RAERSLLLCDASGAPANHFSGIINTDGPDRTGPDHHCPIKNLDVQMS
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctctctgtcagaggagcgagacaggatccagcgacaggtggaggagctggag
cagagtctgtctgtaacacacggtgatctgcagctgctgagcagtgagacagatgatgaa
tcaggaagtgatgacacagaggtcagacagtctgcagcaggtctgttgtctcagagagag
aagatcaagagagacatcgagaacctggagaacgtcctgagaccacacagtcctgtctgt
gtgtcagatgatgacagcagcagcagcagcagtgatgagagtgaactgggtctgtccctg
tccgtggattcctgtcttcagatgaacctggtctaccagcaggttcttcaggagaccctg
ggccagctggagacactactgagtcacaaccacagacagcagaaggagctggtgtctcag
atgtctggaccaatcaaagagccccgacaacagaccgccccctcgtcctaccaactgcca
atcaacatgtacctgggtcgcttcctgaaaccgtacttcaaggacaaactgacaggactg
ggtcctccagccaatcaggagacgagggagaagaccagtcggatgacaggatgtctggac
gacaagaaagtgaaaacaaaacgatgggagagctggcagaaaactctgctgatccacgca
gtgtccagagacggactgaggagactgatccagcccaaactgtccagggtggactacctg
agtctgaagctgtcctcagcagaggagacggacaggcagcaactcagagagcagatagac
cgtttggagagagagatcgacctgctcagagggaagaagggggaggagctgatcggtgat
cgatatgaagaacacgattggcagaaaatctccaatattgatttcgaggggacaaaggag
gccgacgacgtccggagcttctggcagaacttcctccacccatcaatcaggaagtgtccg
tggagccgggatgaggtgcaggtgctgagggacgagagccagagacacaaggacagacac
tgggagggcatcgcccacaacctggggacggggaggacagccttcatgtgtctccagacg
ttccagcggttcgtgtcgacctcgttgcgtcgcagcacctggactcctgacgaagacgat
ctgctccggatgctcgtcgacaagatgaggattggaaacttcatcccctacacgcagatg
agttacttcatggagggtcggaacccggcgcagctgatctacaggtggaaccaggttttg
gacccgagcctgaagaaaggaccgtggaccaaagatgaggacgagctcttgctacaagct
gtctcacaccacggggagaagaactggtggaagatccggttggaggttcctggacgaacc
gacagcagctgcagagacaggtatcaggactgtctgaagtctgggaggaagcgaggagcg
tttgatgaacaggagcggaacctgctgctgctcctggtgcagaaacatggtgtaggtcgc
tgggcgaagatcgccgctgagatacctcatcgttacgacgctcagtgtctgagggagtgg
aggaaagtgagcagaccgcggccttgtccgcctcagagaggaggagagaagaagaagagg
acgaggaggaagatgaaaccggaggaggaggaggaggaggaggagaagcactctgctccc
cccacactctgtaccccagctgttggtgatggtgttgacgagacacgctcacatgtgatg
gagatcagaggtcggcggcacgccactgaagtcaaggctgaagccacgcctcctgtaccc
tcttcctccctgatcacatttcctccaccctcctcctctcagatcatgtctcctcctctc
tcctcctccctgatcacgtctcctccaccctcctcctccctgatcacgtctcctccaccc
tcctcctccctgatcacgtctcctccaccctcctcctcccgtatcacgtctcctgtcaac
gaccatgactacgccattggtccttacctcaccctcagtcaaccaagccctgcccccaaa
cagctgaaccctgtgcactgtgaattgaactcctccaaagagtcgcccccaaaaaatcac
agcagagggaggaaacgagtaaggggggaagagcaggaccccgtgggcggggctagtgca
ggtgtggtccaggaaggcaaaagggttcggaagccgactcagaaggcaagagagctgcag
gaagacgctgatgccaaggctaaagttaagaagaagaggatgtcttctcctggaaagtct
cgacccgaagggggagctgtggcgctcccctggctgggtttacttcctggtcagtcgatg
tgggtcatgacccctgctgggctggtccagctggcagaagctccgccccaaggcctgcgg
ttggcgttggtcccatgcccgtccgtcccacctcctctgcccactccccctcttcgattc
acctctgtcatacagaaaccagttgcacctgtgcccctccctgccccgcccacctgtcat
tatatgcctgtcccccaaaccgttgtcctaccacctgtcccacaccccctccctccctgt
ccaccccagcccccccccacactgttccttcctcataaggttatggtcagagtggaccag
tctgaagctcctcccctcaggagggaggctctgacctttgacccctccctgatgttcctt
gagccccaggaagctgtgtgtgattggctgagtggacggggaggggtggtggtacccgga
gcaggagtggctcttccctacctgccgcccttcgtcagcagtctgactgcgttcagttcg
cttctccgggtaaagaagtctctaaccaaatcgtccctgcagctgctgcgtcatcaccct
ggaaccaaaaccagaaccagaaccagacccgacagtccacctccgtcagacctgccggac
tccacctctgatctcagaccagcaagcgaccaaccaggaagcacacctctgccagctgct
cctgtcggccccgacgaggacgaggaggagcttgtggtggaggtgcgtcagctggtgacg
gagcgtttctcaggtaaccccgcctaccagctgttgaaggcccgcttcctgtcctgcttc
actgtccccgccctcctcgccaccatccagccagtagcaaagaagacgggggtctgccag
gccaatcaggaagaggaggaggaggagctgaagaacatcagagcgagggggagacagagg
agagcagagagatcgttgctgctgtgtgacgcatcaggagctccggccaatcatttctca
ggaattatcaacaccgacggaccagaccggactggaccggaccatcactgtcccattaaa
aaccttgatgtccagatgagttga
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