Scophthalmus maximus (turbot): 118314332
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Entry
118314332 CDS
T09850
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118314332 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118314332 (ppil2)
03110 Chaperones and folding catalysts [BR:
smau03110
]
118314332 (ppil2)
04121 Ubiquitin system [BR:
smau04121
]
118314332 (ppil2)
Enzymes [BR:
smau01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
118314332 (ppil2)
Spliceosome [BR:
smau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118314332 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
118314332 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
118314332 (ppil2)
Chaperones and folding catalysts [BR:
smau03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
118314332 (ppil2)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
U-box type E3
118314332 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
Type_III_YscX
Motif
Other DBs
NCBI-GeneID:
118314332
NCBI-ProteinID:
XP_035496611
LinkDB
All DBs
Position
19:complement(3342578..3358395)
Genome browser
AA seq
537 aa
AA seq
DB search
MGKRQHQKDKMYITCSEYTHFYGGKRTEIPQANFRRLPFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIRLNFAKNSDGKYHCPVLYNVFTNNSHFVANK
VTGNVFSNEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKLDPAYHLKSTNMETRETLAELYKDYKGDQLLASTMKEPESKKTDKLNAAH
YSTGRVSASFTSTAMTPSTTQEAEAIADDTVRYQYVKKKGYVRLHTNKGDVNLELHCDKV
PKAGENFIRLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCNYLDRKHSIFGRVVGGFEALTAMENVESDPKTD
KPKSEIKLISATVFVDPYEEADVEIASQREKEQQRQEDERQQASVSLKKAKEEQAPKTFK
KGVGKYINPSTVKRSAAEEESGASTSGPSTSGPSTSGAASAAKKSKAKSSFGDFSSW
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaggataaaatgtacatcacgtgttcagagtacacgcac
ttctatggagggaaacgaacagaaatcccacaggcaaacttccggcggcttccattcgac
cactgcagcttgtcccttcagccgtttgagtatcctgtctgcaccgaggagggagtcgtc
tttgacctgctgagcattgttccctggatcaagaagtacggcactaatccgatctccgga
gagaaactggaagcaaagtctctcatcagactcaactttgctaagaacagcgatggaaaa
tatcactgcccagtcctgtacaacgtcttcaccaacaattctcacttcgttgccaacaag
gtcacaggcaacgtcttctctaatgaggctgttgagcaactcaacattaagaccaagagt
ttcaaagatctgctgaccgatgagcccttcaccagaaaggacattatcacacttcaggac
ccaacaaacctggataaattcaacgtttcagatttcttccacgtgaagaacaacctgaag
gttttggatccagatgaggaaaaggcgaagctggacccggcgtaccacctgaagagcacc
aacatggagaccagggagaccctagcggagctgtacaaggactacaagggggatcagctc
ctggcttccaccatgaaggagcctgagtccaagaagacggacaagttgaacgctgctcat
tactccacaggcagagtctctgcctccttcacgtccacggccatgactccgtcgacaacg
caggaagcagaagccatcgcggacgacaccgtgcgctaccagtacgtgaagaaaaagggc
tacgtccgtctgcacacaaacaagggagatgtgaatctggagttacactgtgacaaggtt
cccaaagctggagagaacttcatccgtctgtgtaagaagggatactacgacgggaccgtc
ttccacaggtccatccggaacttcatgattcaaggaggggaccccaccggcaccggcaca
ggcggagaatccttctgggggaaacctttcaaggatgagttccgacccaacctgtcccac
accggcagggggattctcagcatggccaactccggccccaacaccaacaagtcccagttc
ttcatcactttccgctcgtgcaactacttggacagaaaacactcaatatttggaagagtc
gtcggtggatttgaggctctcacagccatggagaatgtggagagtgatcccaaaaccgac
aaaccaaagtcggagatcaagctcatcagcgcgaccgtgttcgtggacccgtacgaagag
gccgatgttgagatcgcatcacagcgagagaaggagcagcagaggcaggaggacgagcgg
cagcaggccagcgtcagcctgaagaaagccaaggaggagcaggcaccgaagaccttcaag
aagggtgtcgggaagtacatcaacccttccacagtaaaacgctcggcggctgaagaggaa
agcggagcgtccaccagcggaccgtccaccagcggaccgtccaccagcggagcggcatcg
gcggccaagaagtccaaagccaagagcagcttcggagacttcagctcctggtag
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