Scophthalmus maximus (turbot): 118314468
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Entry
118314468 CDS
T09850
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118314468 (cicb)
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118314468 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
118314468
NCBI-ProteinID:
XP_035496844
LinkDB
All DBs
Position
1:14729654..14764268
Genome browser
AA seq
2733 aa
AA seq
DB search
MRPIKKHRGRSPPLARGRGGRRRGASQLLQEKDPKRVKRETLVKTTQHTPNTPSIRKQSP
PTASNSNEEPVANSNREETTEPRKPAESVDRDGKKAVEKTEKEKTVGTNTAMSTKSLAFP
TSAPAPLSTATPTLATNHSPSLGSVSSRKTATFKARVPKKKYTYEHFANNASALTTIPTS
SPALIHNSYCNINSKISDNVKILNNISNSINRSINVSINSSTNSNTTSGINTTNSSNSSA
GSHNTIINSSNSRSNNCSGNQPSVLTVDSKATEENHLIPMEDRALRIADSQEKEAKVGEN
ESEGAPNSVRSSSTDTASEHSADLDAMEATGPSLHQKNSHLAAPLHNSHPEEASLSGGLA
EALAKGMKNQRVLARQLKRAIESVVGSAMDRGVKERDLSTVFRPGVVRRVSGGSVEVQLQ
GEETFVKYPFHGGSVMISSPSAGADTTVDFILDAPPPGMAPVAVGTQVCVPFGGEERGPL
LYRQGIITQVDPHPGVSFPYQVLLCEDRETLGNGGVAEEKEKGKAVWVSRQSMRLLTPPW
EVPHLDGGKAKEREREREREERERREEMEVEREVCQLSIGMGVLGGGARLDFAHEGVTGG
HPYGSTHPPPHSSTVTSSAVASTVHGCGGNYSDREGEKQPNTPDEDVEVSRFNMGLSAGP
KPNAGTSQQRNIISKSRSYPPSSPHLTVVRGLGPPRLSTLASPQPPPSPALLGSEINNTT
PNLPPSKTTPTQTHTPTSGGGSSSTSSRSRTPLSLAQQKYKKGDVVCTPNGIRKKFNGKQ
WRRLCSREGCMKESQRRGYCSRHLSMRTKEMEAAGGERGAGGGGSSSGTVTPSDLRGRAS
SEFEWDDTSRESSETSSRGDSRPRLVLPSLLPHDLSSRFDFDECEAATMLVSLGSSRSGT
PSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSGTGGGGGGGSK
AVASAGGAERERHTSGIQPSFHSNLTFTVPMSPSKRKPDAPPLPPLPSHHHDYTTKTELD
QGELNSFRVLSPQTPASHSHTHTPTFPRPRGVTTPSLSRPSSSTAVSPPPLLVSPTPPSP
LTLDGGPLRGVPVSQQALRDSPVIVRNPEVPLAKFTECPLGRGGGGGNEGGINNTSSKDI
GITPLTPQPICGLQVPVPINAATATVPNGTILLRSPTQTLVLVSPSPSSLLTTDNPATPL
QALSVTVSQATAPAPSSTDSSVERQENRGTGFGGEVQQPVPCHPSPTALLPLILPAENLH
PIPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEVQHPVNHPQAA
ILKTECQGVSALSQEPAEAPPTVERGPPSRPPPSSEEPPPEKEKGDAERERPDSETESDV
DDPFLPGVVPEPPLSTSPVKRRTQSLSALPKDGDKSSPGKREKDHIRRPMNAFMIFSKRH
RALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDR
KKSSSEGRGVPGGKDIRERSMSESTEPHSVELKGAGPGLVSERSTGEGHVGQLTRPRAFS
QSAMHSLERSDRGNTQALAELAQMCGDGGSQFSSHAPPLSQSQRGVSEDMTSDEERMVIC
EEEGDDDVIEGPYPSSSIDLKCKERVTDSDSDNGSGDESDRKRIFAPVICSTASSSSSHH
TPHGRSVSLSSYPTSKRYDEGRSGVGGFSDHRRKERGEGEGKDTYGGEGGGGGGIQASSL
SLSSGQSVISTSAAGGTPSSALGVNPLLGIGAVRVASTVVTNVMRPVISTPLPIASKPRD
GGTSSSPHPPEKRSLTPHQQQLLIGSGPGSGPTAIGGGYYSSSSPNPVGGGVGPGGVVTN
LVLGGALSAQSAVQLFTPSPHSQPSLHQALTSTTVSVPHSQTNGPLPMPLLQPQFLPASS
MAPHGGKAITQVQYILPTLPANTNPRSPPQHPSQPTSIFNLPTAPPTHMSFANGKQQGTS
SLTGYTSSPAVGVVSPGTRVQTQSPVLQGKMLVPMATVRTAPAPAQQFPIVAPPLPVQNG
AHTGSKIIQIAPMPVVQSQLSQGGAVHPASPFPVTVGTATVVAPGSAPSQAVLLPPAPTR
ITYVQSTPGVPSTLPLVSTTTGSSPTQQALPVPGSAYVSSPLATLGFTAIAPPGQTLVQP
LIAGQPPLLATAQAPQPPTSGPASGSGGQIVTAIYPPSTSVAMATGLVSMTTVPPSVVYS
VSSPSSMSPHILPKHTATAATITHLPPDRQAERHLPPNRAADRQAERQTELLTHSDRQLE
RQMQASGNSSSVAPPGGLTVSIRPCSPSLQIQTPGSSPGTPKLTQLPARAPQKVKATVAN
IPVGSYEGGGRGKERDREKDREREREKERERERDDAANSHFSFDPEPMGQMGSQSTLPVE
EPQSSDRPLEGSSVADSSDKRTREITSTKEPEWKDSLPSSPLSAAEPALPPPQTDKDGPP
PKKVKARPPPLKKTFDSVDKSGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRA
ILGSYRRKRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRADS
RGLNHSTYLSPLPATDGEDILAELEFEKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQA
TAAFQTRYSDIFPTKVCLQLKIREVRQKIMQTAAPSDASGLCISDQAGSLPGPSGSQSGE
GCARGSGDLQDDEVEQGTDASPEDPRDSHDSCR
NT seq
8202 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaataaaaaagcacagagggcgttctccgccgttagcacgaggcagagggggg
agacggagaggagcctctcagctcctccaggagaaagaccccaaaagagttaagagggag
acactcgtcaaaaccacacagcacacacccaacactccctccatacgcaaacagagtccg
cctacagccagcaactcaaacgaggagccggtcgcaaacagcaacagggaggagacaact
gagccgaggaaacctgcggagtcagttgacagagatggaaagaaggcagtagaaaagaca
gaaaaagagaagacagtgggcacgaatacagccatgtccaccaaatctttagcatttcct
acctctgccccggctccactgtccacagccacgcctactctcgccaccaatcacagcccc
agtttaggctcagtctcgagtaggaaaacagccacatttaaggcccgcgtcccgaagaag
aagtacacatatgagcactttgctaacaatgcaagtgccctgactaccattcctacctcc
agccctgcactcatacacaacagctactgcaatattaacagcaaaattagtgataatgtg
aaaatactcaacaatattagtaatagcattaacagaagcattaatgttagtatcaatagt
agtactaacagtaacactacaagtggtattaacacaactaacagtagtaatagtagtgct
gggagccataatacgatcattaatagcagtaatagtagaagtaataattgctcaggtaat
cagccatcagtgctaactgtggatagtaaagctacagaagaaaaccatctaatccccatg
gaagatagggccctcaggattgcagactcccaggaaaaagaggccaaagttggtgaaaat
gagtcagagggggcccccaactcggtgcgctcctcgtccactgatacagctagtgagcac
tcagctgacctggacgcgatggaagcgacaggtcccagccttcatcaaaaaaactcccac
ctcgcggctcccctccataactcgcaccctgaagaggccagcctttcaggggggctggct
gaagctctggccaaaggcatgaagaaccaaagggtcctggctcgtcagctaaagagggcc
atagagagtgtggttgggtctgcgatggacagaggggtcaaggagagagacttgtcgact
gtgttcagaccaggggtggtgcgtcgggtaagtggaggttcagtggaagtccagcttcaa
ggagaggagacgtttgttaaataccctttccatggtggatccgtgatgatatcatcacca
tcagcgggggcagataccactgtggacttcattttggatgcccccccacctggcatggca
cctgtggctgtagggacccaagtgtgtgtgccctttggtggagaggagaggggtcctctg
ctgtacagacaggggattatcactcaggtggaccctcaccctggcgtctcattcccctac
caggtgctcctttgtgaggacagagagactcttggtaatgggggggtggcagaggaaaaa
gaaaaagggaaagctgtgtgggtgtcccggcagagcatgagactcctcacccctccctgg
gaggtcccacatttggatggtgggaaagcaaaggagagggaacgggagagggaaagggaa
gagagggagcggagggaggagatggaggtagagagagaagtgtgccagttgagtattgga
atgggggtgctgggagggggagcaagattagattttgcacatgaaggggtcacaggaggg
catccatatgggagcacacatccacccccccactcttccactgtcacctccagtgcagta
gccagcacagttcatggctgcggaggaaactactccgaccgagaaggagagaaacagcca
aacactccagatgaagatgtagaggtgtcccgttttaacatgggcctttcagctggtccc
aagccaaatgctgggacctctcagcagaggaacatcatctccaagtcccgcagctaccct
ccctcctccccccacctcactgtagtacggggtctgggacccccacgcctctccacactt
gctagtcctcagcctcccccttcacctgccttactggggtctgaaattaacaacaccact
ccaaacctacctccatccaagaccactcccacccagacccatactcccacttctggtggg
ggatcctcctctacctcctctcgctccaggactcccctctcattggctcagcaaaaatac
aagaagggcgatgtggtgtgcaccccgaatggtatccgtaagaagttcaacggtaagcag
tggagaaggctgtgctccagggagggctgtatgaaggagtctcagcgtcgaggatactgc
tccagacacttgtccatgaggaccaaagagatggaggcagcagggggggagaggggggct
ggaggaggaggaagcagctcagggaccgtcaccccctctgacctacgaggcagagccagt
agtgagtttgagtgggatgacacatcaagagagagtagtgagaccagtagcagaggagac
tccagacctcgcctggtcctgccttccctcctcccccatgacctgtcttcacgctttgac
tttgatgagtgtgaggccgccaccatgctcgtatcattggggagctcccgctcgggcacc
ccctccttttctcccatctccaaccagtcgcccttctcccctgccccatctccctcaccc
tccccactttttggcttcaggccggcaaacttctccccgattaccgcctccccggttctg
caacaccggaggcacaggcagcccagtggtacggggggaggagggggagggggcagtaaa
gcggtagcctcagctgggggagcagaaagagagagacacacttcaggcatccagccttcc
ttccacagcaacctgacgtttacagtccccatgagccccagcaaacgaaagccagatgca
cctcctctaccaccccttccctcacaccaccacgattacacaactaagacagagttggat
cagggtgaactcaactctttcagggtgttgtccccccagacaccagcttcacattcccac
acacacacgcccaccttcccccgacccagaggagtgaccaccccctctttaagtcggccc
tcgtcctccactgctgtctcccctcctcctctgctggtgtctccaactcctccttctcca
ctcacccttgatggggggcctcttcgtggggtccctgtatcccaacaggccttgcgggac
tcccctgtcattgtgcgtaatcctgaagtcccactggcaaaatttacagaatgtccctta
ggaagaggaggaggaggtggaaacgaaggcgggattaataacacttcatctaaagacatc
ggcataacaccccttacccctcagccaatttgtggactccaggttcccgtccccattaat
gctgccacagccaccgtacccaatggcaccatccttttgcgaagcccgacccaaactttg
gtgcttgtgtccccatcaccttcctccctactcaccactgacaaccctgccacccccctg
caggctctgtcagttactgtcagccaagccactgcccccgctccaagtagcacggacagc
tctgtggaacgtcaggagaacagggggacagggtttgggggtgaggtccagcagccagtt
ccctgtcacccgtctcccactgcattgctgcccttgatcctcccagcagaaaaccttcac
cccatcccacggaaggacatcatcatgggacgtcctggcacagtgtggaccaatgtagag
ccccggtcagttccagtcttcccctggcattcattggtccccttcctggcaccaacccaa
tcagatgcttcttctcagccaggggaggttcagcatccagtcaaccacccccaagcagcc
attctgaagacagagtgtcagggggtgtcagcgctgtcacaagagcctgcagaggcacct
cccactgttgaaagaggtcccccgtcccggcctcccccctcctctgaagagccgcctcca
gagaaggagaagggagatgcagagagggagaggcctgacagcgagacagagagcgatgtg
gatgatcctttccttccaggagttgtaccagagccgcccctctctacatcaccagtaaag
aggcgcactcagtccctcagtgcgctgcccaaagatggagacaagagcagccctggaaag
agggagaaggaccacatccgccggccgatgaatgccttcatgattttcagcaagcgccat
cgagcattggtgcaccagcggcacccaaaccaggacaacaggacagtgagcaagattctt
ggggagtggtggtatgctctgggacccaaggagaaacaaaagtaccacgatttggccttc
caggtaaaggaggcccactttaaggcgcacccagactggaagtggtgcaacaaagacagg
aagaagtccagctctgaaggccgaggagtcccaggaggcaaagacatccgagagaggagc
atgtccgagtccacagagccccattctgtggagctgaagggggcaggtccaggtctggtt
tctgagaggagtacaggtgaaggtcatgtgggccaacttacccgaccccgagccttctct
caaagtgccatgcacagcctggagcgcagcgacaggggtaacacacaggccctggcagaa
ctggcacagatgtgtggggatggtggcagccagttttcgagtcatgccccacccctgtcg
cagtcccagcggggggtcagtgaggacatgaccagtgacgaggagcgcatggtcatctgt
gaggaagaaggagatgatgatgtcattgagggcccctatcctagtagttccatagacctt
aagtgtaaggagcgggtgaccgacagcgatagtgataatggttctggagacgaaagtgat
cggaagagaatatttgccccagtcatttgctcgactgcatcatcatcttcctcacaccat
acccctcatggcaggagtgtctctctgtcctcctaccccaccagcaagcgttacgatgag
gggagatcaggagtgggtgggttttcagatcacaggaggaaggaaagaggagaaggagag
ggtaaggacacatatgggggagagggaggaggaggtggtggtatacaagcctcttctctc
tccctctcgtccggccagtcggtcatttccacctctgcagctggagggactccgtcctcg
gcactgggtgtgaacccactactgggcattggtgctgtgagggtggcgtctacggtggtg
accaatgtgatgcgtcctgttatcagcacaccgctccccatcgccagcaaacccagagat
ggaggcacctcatccagtccacatccaccagagaagaggtccctgactccccaccagcag
caactgctgattggttcaggaccaggaagcgggcctactgccataggtggtgggtactac
tcttcttcttcacctaatcctgtaggtggaggcgtaggcccaggtggtgtagtgactaat
ttggtgttaggaggggctctgtctgcgcaatctgctgtacagctcttcaccccctccccc
cactctcagccctccctgcatcaggcccttacctccactactgtttcagttccgcatagc
caaaccaacgggcccctgcctatgcccctgcttcagccccagttccttcctgcttcctcc
atggcaccccacgggggaaaggccatcacacaagttcagtacatcctgcccactctacct
gccaacaccaaccccaggagtccacctcagcatcccagccagccaaccagtatcttcaac
ctgcccacagctccacccacacacatgtcctttgccaatggaaagcagcagggtacaagt
tcactgacaggatatacgtccagccctgcagtgggagtggtcagcccaggaactagagta
caaacacagtccccggtgctccagggtaaaatgcttgttcccatggcaacagtgcggact
gcaccagcccctgcccagcagtttcccattgtggctccaccccttcctgtccagaacggt
gctcatacaggaagcaagatcattcagatagcgcccatgcctgtggtccagtcccagctc
tctcagggtggggcagtgcaccctgccagccccttccctgtaacagtgggcacagctact
gtggtggctccgggatcagccccctcccaggctgtactgctgccaccagcacccaccagg
atcacctatgtccagtccactccaggggtcccgtccactctgcctctggtctccacgacc
acaggctcctctcccactcagcaagctttgccagtgcctgggtctgcatatgtttcctcg
cccctagcaacacttgggtttacagccattgcaccacctggacagacattggttcagcca
ctcattgcaggtcagcctccgctcttagccacagctcaggctcctcagccccccacgtca
ggccctgcctcaggctccgggggccagatagtcaccgccatctaccctccttcgaccagc
gtcgccatggcaacggggttggtctccatgacaacggtgccccccagcgtggtgtactct
gtctccagcccttccagcatgtccccccacatcctgcccaaacacacggcaacagccgcc
acaatcacacacctgcctccggatagacaggcggagcggcacctgcctcccaaccgagcc
gcagatcgacaggccgagaggcagacggagctgctgacacactcggacagacagctggag
aggcagatgcaggcctccggcaatagcagctcagtggcacctcccggtggcttaactgtg
tccataaggccctgcagtccttcacttcaaatccaaacacctggcagctcaccgggtaca
cccaaactaacccagcttccagccagggcccctcagaaggtgaaggcaacagtggcaaac
atccctgtgggcagctacgaaggaggaggacgaggtaaggagagagatcgggagaaggac
cgggagcgagagcgggaaaaagagagggaaagagagcgggacgatgcagccaacagtcac
ttctcctttgatcccgagcccatggggcagatggggtctcagtcgacacttcccgtggag
gagccacagtcctccgacagacccctggagggctccagtgtggcggactcctctgacaaa
cgcaccagggagatcacaagcaccaaagagcctgaatggaaggactctctcccctcctct
cccctgtccgccgccgaacccgcactgccaccaccacagaccgacaaagacggcccccca
cccaaaaaggtcaaagcccgtccacctcctctcaagaagacctttgactctgtggacaag
tctggcagggtgctgtcggaagtttatttcgaggagcgcttcgccgagctgccggagttc
cgacctgaggaggttttgccctcacccaccctgcagagtttggccacttcaccccgcgcc
attctgggcagctatcgccgtaagaggaagaactcaacagatttggactcggccactgac
gagcaagtctcccctaagagaaagagccggagacgctcgagctgcagttcggaacccaac
actccgaaaagtgccgccaagtgtgagggagacatcttcaccttcgacagagcagattcc
aggggtctcaaccactccacctatttgtccccactcccagccacagatggagaagacatc
ctggcagaactggagtttgaaaaagtgccgtactcgtccctgcgacgaacactggaccag
aggagagcactggtcatgcagctgttccaggagcagggcttcttcccatcagctcaggcc
actgcagccttccagacaagatactccgacatattccccaccaaggtgtgtctacagctg
aagatccgggaagtccggcagaagatcatgcagactgccgccccttccgacgcctccggt
ttatgcatctccgaccaggctggctccctcccgggaccctccggctcacagtcaggagag
ggctgtgcgagaggaagcggggacctgcaggatgacgaagtggagcaaggcacagacgcg
agcccagaggaccctcgggactcgcacgactcttgtagatga
DBGET
integrated database retrieval system
