Scophthalmus maximus (turbot): 118314538
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Entry
118314538 CDS
T09850
Symbol
rnf180a
Name
(RefSeq) cyclin-dependent kinase 11B
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118314538 (rnf180a)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118314538 (rnf180a)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118314538 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
Rrn6_K-rich
zf-RING_6
RING_XB3-XBAT31
FYVE
Motif
Other DBs
NCBI-GeneID:
118314538
NCBI-ProteinID:
XP_035496953
LinkDB
All DBs
Position
19:complement(9509124..9516935)
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AA seq
519 aa
AA seq
DB search
MGSRAGSSGVNGSSRVGGHGTEEENHNTETHASCLKAVRHRLGSADPAGQGRSSSAEHLM
RPALPGRKSHKKTFGDVNRGRWKEGNQETDEERNNVEHVESRDRGKQRQRKTERAETHGD
GAQERQGTGSPESLSRSNSWEVREGSNNLPRGHTCPRPLSIGYSQTNTISLNAQSPRPAL
RSMSSQPTIQSRSTRLSPQGRPAGDLHRFPFSSSSNLDPFWVEVRTGGATGRSGPSHHGS
ELGAEEEGEVDGEEEEEEEEEEEDVENAEEEGSGVMEVMGRTMTPAAVPPCVSTAERRMS
KREKNRIKCLRRRQRRRERWRQSQLQESTQSSTGNPSSSSSEDEEDMSAGDREGYICAVC
LDVYFSPYMCHPCNHIFCEPCLRTLAKSSPTNTPCPLCRTIITHVFFQKELNQTARTFFP
KEYLSRKQNFQKASCAKWPLPSCRKLFRIFGGFQRPSSPIARRQFPHGGGYRLDAMDFED
DSRGWRFDMDLVIVYIYSVNWVIGFFIFCFLCYLFFPSF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccgtgcagggtcctctggtgtgaatggctcaagccgagttggaggtcatgga
actgaggaagaaaaccacaacactgagacacacgcctcgtgtttaaaggcagtaagacat
cgactgggaagtgcagatccagctggacagggaaggtcaagcagtgccgagcacctgatg
agaccagccttgccggggaggaaatcacacaaaaagaccttcggtgatgtcaacagaggg
aggtggaaagagggcaaccaagaaactgatgaggaaagaaacaatgttgaacacgtagaa
agcagggacagaggaaaacaacggcagagaaagactgaaagagctgagacacatggagat
ggagcccaggaaagacaaggaacaggaagccctgaaagtttgtccagaagtaattcttgg
gaagtgcgagaaggatccaacaatttgccgagaggacacacatgtccccgacctcttagt
attggctactcccagaccaacaccatcagtttaaatgctcaatcccctcggcccgcactg
aggtccatgtcttctcagcccaccatccaatccagatccacacgcctgtcaccccagggg
cgacctgcaggcgacctacaccgcttcccatttagttcatccagcaatctggatccattc
tgggtggaggtgagaacagggggagcaactggaagatcagggccaagccatcatggctca
gagttaggagcagaggaggagggggaagtcgacggcgaagaagaagaggaggaggaggag
gaggaggaagacgtggaaaatgcagaggaagaaggcagtggtgtgatggaggtgatgggt
cgaaccatgaccccggcagcggtgcccccctgtgtctctactgcagagaggaggatgagc
aagagagagaagaacaggattaagtgtctgaggaggaggcagcggagaagggagcggtgg
agacagagtcaactgcaggagagcacacagagctcgacaggaaacccatccagcagcagc
agtgaggatgaggaggacatgagcgccggggacagggaaggttacatctgcgccgtgtgt
ttggatgtgtacttcagcccttacatgtgccacccctgcaaccacatcttctgtgagccc
tgtctgaggacgctggctaagagcagcccgaccaacaccccctgccccctctgcagaaca
atcatcacgcacgtcttcttccagaaggagctgaaccaaacagcaagaacattcttccca
aaggaatacctgtccaggaaacaaaattttcagaaagcgagttgtgcaaagtggcctctc
ccgagctgcagaaaactcttccgtatctttggaggtttccagaggccgtccagtcccatt
gccagacgccagttcccccatggaggaggctaccgtctggacgccatggactttgaggac
gactctcgaggctggcgctttgacatggacttggtcatcgtctacatctactcagtcaac
tgggttatcggcttcttcatattctgcttcctttgctacctcttcttcccttctttttga
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