Scophthalmus maximus (turbot): 118314605
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Entry
118314605 CDS
T09850
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118314605 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
smau01007
]
118314605 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smau03016
]
118314605 (vars1)
Enzymes [BR:
smau01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
118314605 (vars1)
Amino acid related enzymes [BR:
smau01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118314605 (vars1)
Transfer RNA biogenesis [BR:
smau03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118314605 (vars1)
Prokaryotic type
118314605 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Arc1p_N_like
GST_C_2
Val_tRNA-synt_C
GST_C_3
tRNA-synt_1e
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
118314605
NCBI-ProteinID:
XP_035497054
LinkDB
All DBs
Position
1:14426555..14437053
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AA seq
1281 aa
AA seq
DB search
MATLYVSPHPDDFRSLLALIAAEFSGASRPQTVTEDPPVSLNARSRPTLVLGAGEGDSVL
SGDSAVAWYLADQGKKAGVDAKQQSQVWQWLSFADNELTPVSCAVVFPLMGVVGVDKKLQ
QSSRAELLRVLKVLNQALEPRTFLVGESITLADMAVATAVLLPFKYALEPSDRNALTNVT
RWFTTCINQPQFLKVLGKVTLCEKMGPVTLKTDAPTDPKAANVCPAADSAGAAANGPPKT
EAQLKKEAKKREKMEKFQQKKETEAKKKTQPATEKKAKPEKKELGVITYNVPTPPGEKKD
VVSPLPDAYSPLYVEAAWYSWWEKQGFFKPEYGRKSISEQNPRGVFMMCIPPPNVTGSLH
LGHALTNAIQDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGMSRHDLGREN
FIQEVWKWKNEKGDRIYHQLKKLGSTLDWDRACFTMDEKLSYGVQEAFIRMHEEGVIYRS
KRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVEGSDEEVIV
ATTRIETMLGDTAVAVHPTDPRYQHLKGKTVLHPFCDRKMPIVFDDFVDMSFGTGAVKIT
PAHDHNDYEVGERHNLPFINILDENGLLINVPPPYLGMKRFEARKAVLQDLKDRGQFKET
KDNPMVVPVCSRSKDIVEPLLKPQWYVNCSDMGKQAADATREGRLKIIPDHHLKTWYNWL
DNIRDWCISRQLWWGHRIPAYFITVNDPSVKPGEDMDGHYWVSGRSEEEARQKAAKRFCV
SVDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLNMFYPGTLLETGHDILFFWVARM
VMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGITLEGLHAQLTDSN
LDPLEAEKAKQGQKSDYPNGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKL
WNAVKFSMKSLGDNFVPSEKAQLCSEECVSDRWILSRLSAAVGLCDAGFKAYDFPAITTA
IYNFWLYELCDIYLESLKPVFSKAEEDGASQRQALVSRQSLYTCLEVGLRLLSPLMPFVT
EELYQRLPRRRPLSDPPSISVTSYPNTEEFCWQSDEVDRDMEFVMSVVKTIRSLRSDYNL
NKTRADCYLQCIDPATVSLVQKYCLQIQTLSYSQAIITLPTNKPVPEGCAVAIASDRCTV
NLMLKGLIDVEKEVAKLMTKRGDLEKQMEKLRERMVKNDYKEKVPVKVQEQEAEKLRQSQ
TELDKVKEAVENFKKMMQLSA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggccactctctacgtgtcccctcaccccgatgacttcaggagccttctggctctcata
gccgcagagttcagtggggcctctcgcccgcagaccgtcacagaggaccctccagtgtcc
ctgaacgcccgctccagaccgaccctggtgctgggagccggggaaggggactctgtcctg
agcggggacagcgccgtggcctggtacctcgccgatcagggcaagaaggccggtgtagat
gcgaaacagcagagccaggtgtggcagtggctgagctttgcagacaacgagctgacccct
gtgtcctgcgccgtggtcttcccactgatgggggtggtgggagtggataagaagctccag
cagagctctcgtgcagagttgctgcgcgttctaaaggttctcaatcaggcactggaacca
agaaccttcctggtgggagagagcatcaccctggctgatatggctgtagccacagctgtt
cttctaccattcaaatatgcactggagccatcagacaggaacgccctgaccaatgttacc
aggtggttcacaacctgcattaaccagccacagtttctgaaggtgctggggaaggtcact
ctgtgtgagaaaatggggccagttacgctgaagacagatgctcctacagatcctaaagct
gctaatgtctgtcctgctgctgactctgcaggcgctgcagcaaatggtcctccaaagaca
gaagcccagctaaagaaggaagcaaagaagagagaaaagatggaaaagttccaacagaag
aaggaaacggaggcaaagaaaaagacacagccagcaacagagaaaaaagccaaacctgag
aagaaggagttgggagtgatcacctacaacgtcccaactcctcccggggagaaaaaagat
gtcgtcagtcctctccctgacgcctacagtcctctgtatgtggaggctgcctggtattca
tggtgggagaagcagggattctttaagcctgagtatgggaggaagagcattagtgagcag
aacccccgtggtgtcttcatgatgtgcatccctccaccaaatgtgactggatcactccac
ctgggtcacgccctcaccaatgccattcaggacagtctgaccagatggcacaggatgcga
ggcgagaccaccctttggaacccgggctgtgaccacgccggcattgccacccaggtggtg
gtggaaaagaagctgatgagagagaggggtatgagccgtcatgacctgggcagggaaaac
ttcatccaggaagtctggaagtggaagaatgagaagggagatcgtatctaccaccagctg
aagaaacttggctccacgttggactgggacagagcctgcttcaccatggacgaaaaactt
tcctatggcgtccaagaggcctttatccgcatgcatgaagagggagtgatctacaggagc
aagaggctggtcaactggtcctgcacactaaactctgccatctctgacatagaggtggat
aagaaggagctcactggcaggactctgttgcctgtgcctggttacaaagagaaagtggag
tttggggtcttggtgtcttttgcctacaaggtcgagggctcagatgaggaggtaattgtg
gccacgactcgtattgagacaatgcttggagacaccgctgtagctgtccaccccaccgac
cctagatatcagcatctgaagggcaaaacggtgctgcatcccttctgtgaccgcaagatg
cccattgtctttgatgactttgtggacatgagctttggaacaggcgctgtcaaaatcacc
ccggctcatgaccataatgactacgaggttggagagagacacaatctgcccttcatcaac
atcttggatgagaatggcctgctcattaatgtgcctcctccctacctgggcatgaagcgt
tttgaggccaggaaggcggtgctgcaggatctcaaagacagaggccagtttaaagagacc
aaggacaaccctatggttgttccagtctgcagtcgttccaaggacattgtggagccgctg
ctgaagccacagtggtacgtgaactgctccgacatggggaagcaggcggccgacgccacc
cgagaggggcgactcaaaatcatccccgatcaccacctgaagacgtggtacaactggctg
gacaacatcagggactggtgtatttctcggcagctgtggtggggtcaccgtatccctgcg
tacttcatcactgtcaacgatccctctgtgaaaccaggagaggacatggacggtcattac
tgggtgagtggcagatcagaggaggaggccagacagaaggcagcgaaacgcttctgtgtg
tctgttgacaaaatcactctcagacaggatgaggacgttctggacacttggttctcatct
ggcattttccccttctctatcttcggatggcctaatgagacccaggacctgaacatgttc
taccctggcactttgctggagacaggccatgacatcttgttcttctgggttgctcgtatg
gtgatgatgggcctcaaactgaccggcaagctgcccttcaaagaggtttatctgcatgca
gtggtgagagatgcccacggaaggaagatgagcaaatcacttggcaacgtcattgaccca
ctagatgtcattacagggatcactctagagggtcttcatgcccagttgacggacagcaac
ttggatcctttggaggcggagaaggcaaagcagggccagaagtcagactacccaaatggc
atcccagagtgtggcacagatgctctccgttttgccttgtgtgcctatactagccaaggc
agggatatcaacctggatgtcaaccgcatcctgggttaccgtcacttctgcaacaagctg
tggaacgctgtgaagttctccatgaagagtctgggagacaactttgtaccgtcagagaaa
gctcagttgtgcagcgaggagtgtgtgtcagacaggtggattctgtccagactgagtgct
gctgttggcttgtgtgacgctggcttcaaagcctacgacttccccgctatcaccactgcc
atctacaacttctggctgtacgagctgtgcgacatttacctggaaagcctgaaaccagtg
ttcagtaaagcagaggaagacggtgccagccagagacaggccctggtctccagacagagc
ctttacacatgtctagaggtcggtctgcgcctcctgtctcccctgatgccctttgtcacc
gaggagctctaccagaggctaccacgaagacgacctctgagcgacccccccagcatcagt
gtcacgtcctaccccaacacagaggaattctgctggcaaagtgacgaggtcgaccgcgac
atggagtttgtaatgagcgtggtcaagacgatccggtcactcagatccgactacaacctg
aacaagacccgagctgactgctatctccagtgcattgaccctgcaaccgtgtccctggtg
cagaagtactgtctgcagattcagaccttgtcgtattctcaggccatcatcaccctgccg
acaaacaagcccgttccagaaggctgtgctgtggccatcgcctctgacagatgtactgtc
aaccttatgctcaagggtctcatcgatgtggaaaaggaagtagctaagctgatgacaaag
agaggtgacttggagaagcagatggagaaactgagagagaggatggtgaagaatgactac
aaggagaaggtgccagtgaaggtgcaggagcaggaggctgagaagctacggcagagccaa
actgaactcgacaaagtgaaagaggctgtggagaacttcaagaaaatgatgcaactctcc
gcctga
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integrated database retrieval system
