KEGG   Scophthalmus maximus (turbot): 118314633
Entry
118314633         CDS       T09850                                 
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1
  KO
K18723  nucleoporin GLE1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03013  Nucleocytoplasmic transport
smau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118314633 (gle1)
   03015 mRNA surveillance pathway
    118314633 (gle1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118314633 (gle1)
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118314633 (gle1)
SSDB
Motif
Pfam: GLE1 DUF4230
Other DBs
NCBI-GeneID: 118314633
NCBI-ProteinID: XP_035497096
LinkDB
Position
19:complement(2164210..2170184)
AA seq 744 aa
MSPADELQHRTVGSCSFHHPNKSLTMPADSLRWDTLDALKHSPKGKIKFDPFWSDRGEDI
MAGCKEAVSLSANSGIVLERLDSSPLLKFCFLGSSSGHSSPGLSEEIPASGSSRGSLPDV
GAKLNALSAAVDHEQNVSRFLLQSFRNEAKDDEADVSKVSSPASLPSISLLSPKSMETAG
RIIKCEEEHRRKAKVALRVRQEMQEKRLAEVAGSESEQLKRFEEFMELKQRQEFQSIRDM
MDRETKESIGRQEKLKEEQRHRMKILNLRMREAEQQRLREAELERQRQADGRERLRNLNT
IQEEVLQLNQLLEPSSQNNTDLPPASLSSYSVRGNQLCSQVSEVVRKTTEGAFPSVDDMT
VAERALHEMRALIRLMQEEVADVQENRKRREQDEEEALRRQAELQVQQEAQKKAAQSAKE
KAQRKGLQNSAEDSTLKWFRDLQDTATQCAQAFGQLNSAKDVQTKKLKLELQKAATLPVN
QIACNSGSQLREIFDKIDKLLSGRAVVSGGKSVSTSQHPQGLEFVSYKLAEKFVMQGEES
HHEAAFPIAVVASGVWELHPKVGDLLLAHLHRKCPYAVPHYPPMKDGTTVEEYQKILGYR
VNESGVEDQDNFLKRMSGMIRLYAALIQLRWPYGSKQGSSPHGLNHGWRWLSQMLNMEPL
ADITATVLFDFLEVCGNALMKQYQCQFWKIILLLKDEYLPRIEAVTSVEQMGSVSRLKQF
LETSLQRRTINPPKGQLSSNFWRS
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgtcaccggcggacgagctgcagcaccggacggttggaagttgttccttccatcacccc
aacaagtcgctcacgatgcccgccgacagtctgcgatgggacacgctggacgccttgaaa
cattcgcccaagggaaaaatcaagttcgacccgttctggtcggacagaggcgaggacatc
atggcgggatgtaaagaggccgtcagcttgtcggcgaactccggcatcgtgttggagcga
ctcgactcgtcgcctctgctcaagttctgcttcctgggctccagctccggacactccagc
cccggcctgtcggaggagatcccagcatccggttcctccagggggtcgctccccgacgtc
ggcgctaagctcaacgcgctctctgcggccgtcgaccacgagcagaacgtcagccgtttc
ctgctgcagtcttttcgcaatgaggcgaaagacgacgaggcggacgtcagcaaggtttcc
agtccggcgtcgcttccttcaatctccctgctgtcgccaaaatccatggagacggccggc
cgcatcatcaagtgcgaggaggagcataggagaaaggccaaggtggcgctgcgagtgcgt
caggagatgcaggaaaagaggctggcggaggtggcgggctcagagtcggagcagctgaaa
cgcttcgaggagttcatggagctgaagcagaggcaggagttccagagcatcagggacatg
atggacagagaaactaaagagagcatcgggcgacaggagaagctgaaggaagagcagcgg
caccgaatgaagatcctgaacctgcggatgagggaggcggagcagcagcgccttagggag
gccgagctggagcgccagcggcaggcggacggccgagagcggctgcgcaacctcaacacc
atccaggaggaggtgctgcagctcaaccagctgctggagccgtccagtcagaacaacacg
gacctgcccccggccagcctcagctcctacagtgtccgcggcaaccagctgtgctcccag
gtgtcagaggtggtgcggaagacgaccgagggagcgtttcccagcgtggacgacatgact
gtggccgagcgagccctccacgagatgcgggcgctgatccggctgatgcaggaggaagtg
gccgacgtccaggagaacaggaagaggagagagcaggacgaggaggaggcgcttcggagg
caagcggagctgcaggtgcagcaggaggcgcagaagaaggcagcgcagtcggccaaagag
aaggctcagaggaaagggctgcagaacagcgctgaagacagcacgttgaagtggttcagg
gatctgcaggacacggccactcagtgcgctcaggcgttcggacaactcaactccgccaaa
gacgtccagacaaagaagctgaaactggagctgcagaaagcggcgacgctccctgtcaac
cagatcgcctgcaactccgggtcgcagctgcgggaaatcttcgacaagatcgacaagctg
ctgtcgggccgggcggtggtgtcgggcgggaagtccgtgtccacctcacagcatccgcag
ggcctggagtttgtcagctacaaactggccgagaagttcgtgatgcaaggggaggagtct
caccacgaagcggccttccccatcgccgtggtggcttctggcgtgtgggagctgcaccca
aaggtgggagatctcctccttgcccacctgcacaggaagtgtccgtacgccgtcccgcat
taccctccgatgaaggacggtacaactgtggaggaatatcagaagatcctcggttaccgt
gtcaacgagtccggggtggaagatcaggacaacttcctgaagaggatgtcggggatgatc
cgtctgtacgctgccttgatccagctgaggtggccctacggctccaagcaggggtcgtct
cctcacggtctgaaccacggttggcgctggttgtctcagatgctcaacatggagccgctt
gctgacatcacggcgacggtgctgtttgactttctggaggtttgtggaaacgctctgatg
aaacagtatcagtgtcagttctggaaaatcatcctgctgctcaaagatgaatatttaccc
aggatcgaggcggtgaccagcgtggaacagatgggatcggtcagtcgactcaaacagttc
ctggagacgtcgctgcagcgccggaccatcaacccgcccaaaggtcaactgagctccaac
ttctggaggtcgtga

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