Scophthalmus maximus (turbot): 118314633
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Entry
118314633 CDS
T09850
Symbol
gle1
Name
(RefSeq) mRNA export factor GLE1
KO
K18723
nucleoporin GLE1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118314633 (gle1)
03015 mRNA surveillance pathway
118314633 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118314633 (gle1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118314633 (gle1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
DUF4230
Motif
Other DBs
NCBI-GeneID:
118314633
NCBI-ProteinID:
XP_035497096
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Position
19:complement(2164210..2170184)
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AA seq
744 aa
AA seq
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MSPADELQHRTVGSCSFHHPNKSLTMPADSLRWDTLDALKHSPKGKIKFDPFWSDRGEDI
MAGCKEAVSLSANSGIVLERLDSSPLLKFCFLGSSSGHSSPGLSEEIPASGSSRGSLPDV
GAKLNALSAAVDHEQNVSRFLLQSFRNEAKDDEADVSKVSSPASLPSISLLSPKSMETAG
RIIKCEEEHRRKAKVALRVRQEMQEKRLAEVAGSESEQLKRFEEFMELKQRQEFQSIRDM
MDRETKESIGRQEKLKEEQRHRMKILNLRMREAEQQRLREAELERQRQADGRERLRNLNT
IQEEVLQLNQLLEPSSQNNTDLPPASLSSYSVRGNQLCSQVSEVVRKTTEGAFPSVDDMT
VAERALHEMRALIRLMQEEVADVQENRKRREQDEEEALRRQAELQVQQEAQKKAAQSAKE
KAQRKGLQNSAEDSTLKWFRDLQDTATQCAQAFGQLNSAKDVQTKKLKLELQKAATLPVN
QIACNSGSQLREIFDKIDKLLSGRAVVSGGKSVSTSQHPQGLEFVSYKLAEKFVMQGEES
HHEAAFPIAVVASGVWELHPKVGDLLLAHLHRKCPYAVPHYPPMKDGTTVEEYQKILGYR
VNESGVEDQDNFLKRMSGMIRLYAALIQLRWPYGSKQGSSPHGLNHGWRWLSQMLNMEPL
ADITATVLFDFLEVCGNALMKQYQCQFWKIILLLKDEYLPRIEAVTSVEQMGSVSRLKQF
LETSLQRRTINPPKGQLSSNFWRS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccggcggacgagctgcagcaccggacggttggaagttgttccttccatcacccc
aacaagtcgctcacgatgcccgccgacagtctgcgatgggacacgctggacgccttgaaa
cattcgcccaagggaaaaatcaagttcgacccgttctggtcggacagaggcgaggacatc
atggcgggatgtaaagaggccgtcagcttgtcggcgaactccggcatcgtgttggagcga
ctcgactcgtcgcctctgctcaagttctgcttcctgggctccagctccggacactccagc
cccggcctgtcggaggagatcccagcatccggttcctccagggggtcgctccccgacgtc
ggcgctaagctcaacgcgctctctgcggccgtcgaccacgagcagaacgtcagccgtttc
ctgctgcagtcttttcgcaatgaggcgaaagacgacgaggcggacgtcagcaaggtttcc
agtccggcgtcgcttccttcaatctccctgctgtcgccaaaatccatggagacggccggc
cgcatcatcaagtgcgaggaggagcataggagaaaggccaaggtggcgctgcgagtgcgt
caggagatgcaggaaaagaggctggcggaggtggcgggctcagagtcggagcagctgaaa
cgcttcgaggagttcatggagctgaagcagaggcaggagttccagagcatcagggacatg
atggacagagaaactaaagagagcatcgggcgacaggagaagctgaaggaagagcagcgg
caccgaatgaagatcctgaacctgcggatgagggaggcggagcagcagcgccttagggag
gccgagctggagcgccagcggcaggcggacggccgagagcggctgcgcaacctcaacacc
atccaggaggaggtgctgcagctcaaccagctgctggagccgtccagtcagaacaacacg
gacctgcccccggccagcctcagctcctacagtgtccgcggcaaccagctgtgctcccag
gtgtcagaggtggtgcggaagacgaccgagggagcgtttcccagcgtggacgacatgact
gtggccgagcgagccctccacgagatgcgggcgctgatccggctgatgcaggaggaagtg
gccgacgtccaggagaacaggaagaggagagagcaggacgaggaggaggcgcttcggagg
caagcggagctgcaggtgcagcaggaggcgcagaagaaggcagcgcagtcggccaaagag
aaggctcagaggaaagggctgcagaacagcgctgaagacagcacgttgaagtggttcagg
gatctgcaggacacggccactcagtgcgctcaggcgttcggacaactcaactccgccaaa
gacgtccagacaaagaagctgaaactggagctgcagaaagcggcgacgctccctgtcaac
cagatcgcctgcaactccgggtcgcagctgcgggaaatcttcgacaagatcgacaagctg
ctgtcgggccgggcggtggtgtcgggcgggaagtccgtgtccacctcacagcatccgcag
ggcctggagtttgtcagctacaaactggccgagaagttcgtgatgcaaggggaggagtct
caccacgaagcggccttccccatcgccgtggtggcttctggcgtgtgggagctgcaccca
aaggtgggagatctcctccttgcccacctgcacaggaagtgtccgtacgccgtcccgcat
taccctccgatgaaggacggtacaactgtggaggaatatcagaagatcctcggttaccgt
gtcaacgagtccggggtggaagatcaggacaacttcctgaagaggatgtcggggatgatc
cgtctgtacgctgccttgatccagctgaggtggccctacggctccaagcaggggtcgtct
cctcacggtctgaaccacggttggcgctggttgtctcagatgctcaacatggagccgctt
gctgacatcacggcgacggtgctgtttgactttctggaggtttgtggaaacgctctgatg
aaacagtatcagtgtcagttctggaaaatcatcctgctgctcaaagatgaatatttaccc
aggatcgaggcggtgaccagcgtggaacagatgggatcggtcagtcgactcaaacagttc
ctggagacgtcgctgcagcgccggaccatcaacccgcccaaaggtcaactgagctccaac
ttctggaggtcgtga
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