Scophthalmus maximus (turbot): 118314706
Help
Entry
118314706 CDS
T09850
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118314706 (tdrd12)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
118314706 (tdrd12)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118314706 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118314706
NCBI-ProteinID:
XP_035497181
LinkDB
All DBs
Position
7:complement(5757950..5790325)
Genome browser
AA seq
1446 aa
AA seq
DB search
MTKISILKVENPSCLWGRVVRNLGGNTESTEQYNNLLAQMNLFYHELTQDLCKLNPTSIE
EGQVCVVYWSVMKWWCRAVVESIIVDSESSQAHCLLVDHGERLVVASDQIRVAVQTFFQL
PFWVRRFHLAGIKPTTLRVSVYEEKAELTPSAQWDSSATLYLHNLLQASTWTEAVLLESE
SDSTSIELFLSIGNIKICVNDELVAKKFAYYIRESAESSELDEVDRLPIMLSSSILTQTV
SITSNKLTAETPPSPGLVAGRAGDWLTAPSPPQSQQPDLSTSEGDCRPNVTDERLSPGSQ
SKRSSYSSAAESDSSDDTDSSLAAALTKNVNLFNFLKFLNPCSSYQQAARSVDEHEERND
CQPKETAAASSICTGQENEHVTLDEDVLPMSHEKSGAAGLDLTRVEYLADENTSSSIGSV
ESGPAEAEKTLSEVGWVCSRLLEWLNPEPLNPDPDAADDAVVPSDPSMSGILVHSVLPVQ
PCTSLDDAPITDGLRWVLRGKQYSTPSPADCYSWPAVSRGCNTVIVSHNADQPLSYLTPL
LTHILLNSIFSSLTSSTGPIAVLLCPGWEKVQVVYDLLDDSKIAHVLHPVVALPGVEKDA
AKTVRIPKNCRLLVTTPFSFVRLLSCHCFMFLRLYHLVLDEADQLFTLAPDQMVAILQHF
QKVTSTEEKASCPQQLIAVAKRWTSHMESLLTNHMPYPCIVMTVPEEAALYGNVQQVILM
TLETSKISELLGVLDFSPDVGQKTLIIANSTQEVEDVFKAVSNKSAFCLKTHEGLTHQFD
FVIQQWRKIIGSGTHVILVTTHECLKCFGIRDATCIVHYGFPTSPKLFGSRLYCMSENFR
NLSERDQAKSCPHATRSVLLISERNARHIVGVLRYLGRTNAVLPPELLTFAQGLHVARED
LKTNRPLCSYLKSFGVCRDSSACPDRHRFISRLDHSELPASGIIEVVPLFIKTASVFYGR
IVRKEDGGFDGLASEMASYYADKKPRGTELLEGGLYAVQEDNVFHRVKILSVPDRGDRLF
FRVFVRFIDVGKEEQVKSHQILQLPEQFHSLPGQALEIVVCRVRPVDSEIDWHPKVTRAI
SQKVRGLQHRARAVLSLGTTVFVDPMVRVSHVPGMKTVINEHSVQVEILNTGMGVSNQEH
MKLLRALCQEGEASSSKEADHIYGFEDISVSLEGRIKAEEEVLAKVFRAAQARKLSDPPH
IKPCDPLNPVSSVNQSPVPAPQAPKLHLVPVCEEAALSDIQAAKEQRNNRTSDLKPAEQM
RRNRDGGEICPTPDSTAALKSGDSGLPAGDNYSNSQQVAIRTNGIENDVSTKSFHPPVRW
YQNSNSMIVTVKLMNPESQRCDFYPDRVIYSGRVNDQSYRADLELQGNIAVDRCCWEMKS
NEPVLKLVKQEQGHWEKLLRNKNIFVSYDMEHFEDDEDRAPNGLWSVGDTGGDSWYVNTE
SSSDSD
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaatatcaattctgaaggttgagaacccatcctgcctctggggtcgggttgtt
aggaatctgggtggcaacacggagtcgacagaacaatataacaatctgctggctcagatg
aacctcttctaccatgaactcactcaagacctgtgcaagttgaatcccacctcgatagag
gagggacaggtgtgtgtggtgtactggtcagtgatgaagtggtggtgtcgggctgtggtg
gagtcaatcatcgtggactcggagtccagtcaggctcactgcctcctggtcgaccacgga
gaacggctcgtcgttgcctcagaccagatccgagtcgctgtacagacttttttccagcta
cctttttgggtgaggaggttccacctggcaggaattaaaccaacaaccctgcgagtgtct
gtttacgaggagaaggcagagcttactccgtccgctcagtgggacagctcagctacgctc
tacctgcacaacctgctacaagcatctacttggacagaggctgtgttgcttgaatctgag
tcagactccacctccatcgagctcttcctcagcattgggaacatcaagatctgtgtgaac
gatgagcttgtggccaagaagtttgcatactacatcagagagtcggctgaaagcagtgag
ttggatgaggtggatcgacttcccatcatgttgtcctccagcatcttaacccagaccgtc
tccataacctcaaacaagctgacagcagaaactcctccatctcctggtctggttgcaggc
agagcaggtgattggctgacagcgccctctccacctcagagtcaacaacctgatctgtcg
acgtccgagggagactgtaggcctaatgtgacagatgaacgactgtctccaggcagccaa
tcaaagagaagctcttactcttctgctgcagagagtgactcatcagatgacaccgactcc
tctctggctgcagctctgaccaaaaacgtcaatctgttcaatttcttgaagtttctgaat
ccttgcagcagctaccagcaggctgctcgtagtgtcgatgagcatgaagagcggaatgac
tgtcaacctaaagagacagctgccgcctctagtatctgcacaggacaggaaaatgagcat
gtaacactggatgaggatgtgctacctatgagccatgaaaaaagtggagctgcaggtctt
gacctcactcgggttgaatatctggcagatgaaaacacaagcagctccattggatcagta
gagtcaggaccagcagaagcagagaagacgttgagtgaagtgggctgggtctgttcccgg
cttttggagtggttgaaccccgagcctctgaaccctgatccagacgctgcagatgacgct
gttgttcccagtgatcccagcatgagtgggattctagtgcactctgtgctcccagttcag
ccctgcaccagtctggatgatgcccccatcactgatggtctccgttgggtgcttcgggga
aagcagtacagcactccatctccagctgactgttatagctggccagctgtttctcgagga
tgcaacacagtcatcgtgtcccacaatgctgaccagcccctcagctacctcaccccactc
cttacccacattctgctcaactccatcttcagctccctcacctccagcacagggcccata
gcagtgctgttgtgtccaggctgggagaaggtccaggtggtgtatgacctgctggatgat
agcaagatcgcccatgtccttcacccagttgttgcgctgccaggtgtcgagaaggacgct
gcaaagactgtcaggatcccaaagaactgtcgactgttggtgaccactcccttcagtttc
gtccgtctgctgtcctgtcactgcttcatgttcctgcgtctttaccacctggtgctggac
gaggccgaccagctcttcactcttgctccagaccagatggtggccatcttgcagcatttc
cagaaggtgacctccaccgaggaaaaggcctcttgtcctcagcagctcattgctgtggcg
aagcggtggaccagtcacatggagagcctgttaaccaatcacatgccctacccctgcatt
gtcatgaccgtccctgaggaagctgctctctatgggaacgttcagcaggtcatcctcatg
actctcgagaccagtaagatctcagaactcttgggcgtgttggatttcagcccagatgtc
ggccagaagactctgatcattgccaactctactcaggaagttgaagacgtgttcaaggcc
gtgagcaacaaatcggcattctgcctcaagactcacgagggattgacacaccagttcgac
tttgtcatccagcagtggagaaaaatcatcggctctggcactcatgttattcttgtaacc
acccacgagtgtctgaagtgttttgggatcagagatgcaacttgtatcgtccactacggc
ttccccacctctcccaagctgtttggcagccgactctactgcatgtctgaaaacttcaga
aacctctcagaacgggatcaagcaaagagctgcccccatgccaccaggtcggtgctgctg
atctcagagagaaacgcccgtcatattgtcggggttctgcgttacctgggacgaaccaac
gccgtactgccccctgagctactgaccttcgcccagggcctccacgtggcccgggaggac
ctgaagaccaacaggcctctctgtagctacctgaagagctttggagtgtgcagagacagc
agtgcatgtcccgaccgtcacaggttcatttcccggctcgatcattctgagcttcctgcc
tccggaatcatagaggttgtacctctgttcatcaagacagcatcggtcttctacggtcgt
atcgtcaggaaagaggacgggggttttgatggcttggcctctgagatggcttcttactac
gctgataagaaaccaagaggcacagagttgttggagggaggcttatacgctgtgcaggaa
gacaacgtcttccacagggtgaagatcctctctgtccccgacagaggtgaccgcctgttt
ttcagggtcttcgttcggtttatcgatgtaggaaaggaggagcaggtgaaatcccatcag
atccttcagctgccggagcagtttcactctctgcctggccaggcgctggagatcgttgtc
tgccgggtcagaccagtagactccgagatcgactggcacccaaaggtcaccagagccatc
agtcagaaggtccgaggtctgcagcatcgagccagagcagttctcagtttgggaactact
gtctttgttgatcccatggttcgggtgagccatgtgcctggtatgaaaaccgtgatcaat
gaacacagtgtccaggttgagatcctcaacactggcatgggggttagcaaccaagaacat
atgaaactgctgagggcgttgtgccaggagggtgaggccagcagcagcaaggaggcagac
cacatttatgggtttgaggacatctcagtgtctctggagggcaggatcaaagctgaggaa
gaagttctggctaaagtcttcagagcagcccaggctaggaagctctcagaccctcctcat
atcaagccatgtgatccattaaatccagtatcttcagtgaaccagtcaccagtccctgca
ccacaagctcctaaactccacttggtcccagtgtgtgaggaggcggccctgtcagacatt
caggctgcaaaagaacagagaaacaatcgaacatctgatctgaagccagctgaacagatg
aggaggaacagagatggaggagaaatttgtcccacacccgactcgactgctgctctcaaa
tcaggtgatagtggtttgcctgcaggtgacaattacagcaacagccagcaggttgccatc
agaacgaatggaatagaaaatgatgtatccacaaaaagtttccatcctccggtccgctgg
taccagaattccaactctatgattgtaactgtgaagctgatgaacccagagagtcagcgc
tgtgacttctaccctgaccgggtcatctacagtggcagagtgaacgatcagtcatacaga
gccgacctcgagcttcagggcaacatcgctgtggaccgctgctgctgggaaatgaagtcc
aatgagccagtactcaaactggtcaaacaagagcaggggcactgggagaaactcctcagg
aacaagaatatttttgtgagttacgatatggagcactttgaagatgatgaagacagagct
ccaaatggtctgtggtcagtgggtgacacaggaggggatagctggtacgtgaacacagag
agcagcagtgatagtgattga
DBGET
integrated database retrieval system
