Scophthalmus maximus (turbot): 118314721
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Entry
118314721 CDS
T09850
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118314721 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118314721 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118314721 (usp5)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118314721 (usp5)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118314721 (usp5)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118314721 (usp5)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118314721 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Motif
Other DBs
NCBI-GeneID:
118314721
NCBI-ProteinID:
XP_035497217
LinkDB
All DBs
Position
1:14233039..14246001
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AA seq
847 aa
AA seq
DB search
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFSSPDNEGGLYVCMNSFLGFGSQYVDRH
HARTGQRAYLHITRTRKTKKEEDINTGSGHPPKKKPTRLAIGIEGGFDVEQEQYEEDIKV
VILPDRQEVTSEDLTTMPDVVKERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESRHAAD
LKQLDNGVKIPPSGWRCDVCDLQENIWMNLTDGKVLCGRRYFDGTGGNNHALLHFQQTGY
PLAVKLGTITPGGADVYSYDEDDMVLDSKLPEHLAHFGINMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNMDKII
DDAPSDPTQDFKTQVAKLGYGLLSGEYCKPAPDPGDENDASEPRGDQIGIAPQMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGANPSEAFRFLVEERIVCQESQKAKYTQR
VDYMVQLPVPMDQATNTEDLQEAERRREEGDSAAPTVRAQIPFTACMAALSEPEILTDFW
SSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSGLRATG
QQPGEELLPEVAPPSLVTPDVEVKGILGYHGNEEDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACKKAVYYTGNTGIDAAMNWIMGHMDDPDFSAPLVLPGCSSGPGTTPTESVSEEHLA
TIVSMGFSRDQATKALRATSNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGRDPPPG
PRVRDGPGKYELFAFVSHMGTSTMCGHYVCHIKKNQQWVIFNDQKVCASEKPPKDLGYLY
FYRRVAE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcggtgaggttttgatgtcggtgttgtccacaattcgggtcccgaagccc
ggggaccgtgtccacaaagacgaatgcgccttgtcattttcctcgccggacaacgaaggg
ggcctctatgtgtgcatgaacagttttctgggctttgggagtcagtatgtggacaggcac
catgctcgcactggccagagggcttacttgcacatcacccggactcgcaagactaagaag
gaagaggacattaacacaggatctggacacccgcctaagaaaaagcccaccagattggcc
atagggattgaaggaggctttgatgtggagcaggagcagtatgaggaggatataaaggtg
gtcattttacctgacagacaggaagtgacatcagaggacctcactaccatgcctgacgtt
gtgaaagagcgggtgtccctgtcaatggcgggtatcatggcagctgactcagtgtctcat
acattacaagttcaacaatgggacggagaggtgagacaggagtcgaggcatgctgctgac
ctgaaacagcttgataacggagtcaagatccctcctagtggctggcggtgtgatgtttgt
gatctccaagagaacatttggatgaacctgacagacggcaaagtgctgtgtggtcgcagg
tattttgacggcaccgggggcaacaatcacgcccttcttcacttccagcagacaggatac
ccacttgctgtcaaactcggtaccatcaccccaggtggagcagatgtgtattcctatgat
gaggatgacatggtgctggattccaagttaccagagcacctggctcactttggcatcaac
atgatgaccatggagaagactgagcggaccatgacggagctggagattgctgtgaaccag
cgtgtgggggagtgggaggtgatccaggagtctgggaccaccctacgtcccctgtttggc
cccggcctgactggcatgaagaacctgggcaacagctgctacctcaactccgtcatgcaa
gtgctcttcaccgtccctgacttccagagcaagtacgtgtccaacatggacaagatcatt
gatgatgctccaagtgaccccacccaggacttcaaaacccaagtagccaagctcggctac
ggtctgttgtcaggagagtattgcaaaccagcaccagaccctggagatgaaaacgatgca
tctgaacccaggggagaccaaattggtatcgcgccacaaatgttcaaagcacttgttggg
cggggccacccagagttctccaccaatcgtcaacaggatgctcaggagtttctattgcac
ttcataaacatggtggagagaaactgccgctctggggccaacccatctgaagccttcagg
ttcctggtggaggagaggattgtgtgtcaggaatcacagaaagccaagtacacacagcgt
gtagattacatggtccagctgcctgtgcccatggaccaggctaccaacacagaagatctt
caggaggcagagcgccggcgtgaggagggggactccgcagcccctacagtgcgtgcacag
atccccttcacagcttgcatggcagccctcagtgaaccggagatcctcacagacttctgg
agctcagctgtgcaggccaagactactgctaccaaaacaacccgctttgcctctttccct
gaccacctggttatccaaattaagaagtttacctttggccttgactgggtacccaagaaa
ctggacgtgagtatcgacgttcccgatactctggacctgagcgggcttcgtgccactggc
cagcagccgggggaggagcttctgccagaggtggctccgccctcactcgtgacccctgat
gtggaggttaaaggtatcctgggttaccacggcaacgaggaggacgactcgctctactcc
ccactgctgtctccggtccttgatgactccactgtgtctcagttatgtgaaatgggattc
ccactggaagcctgcaagaaagctgtgtactacactgggaacactggcattgatgctgcc
atgaattggatcatgggccatatggacgacccagacttctcggcccccctggtgttgcca
ggctgcagctctggccccgggaccactcccacagagagcgtctccgaggagcacctagca
accatcgtctccatgggcttcagccgagaccaggcaaccaaagctctccgagccacgagt
aatgttctggaccgtgcagtggactggatcttctcgcacctggatgacctcgagtccatg
gacgtgtctgaaggaggccgctcggcagcagagagcgagggcagggatcctcctcctggg
cctcgagtcagagacggaccaggaaagtacgagctctttgcatttgtcagccacatgggg
acgagcacgatgtgcggccactacgtctgtcacatcaagaagaatcagcagtgggtgatc
ttcaacgatcagaaggtgtgtgcttctgagaaacctcccaaagacctgggatacctctac
ttctatcgaagagtggccgaatga
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