Scophthalmus maximus (turbot): 118314748
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Entry
118314748 CDS
T09850
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118314748 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118314748 (nedd1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
118314748 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
118314748 (nedd1)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
118314748 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
CFAP251_N
EIF3I
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Gbeta
PAC11
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_ACSF4
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
ASA1
Cytochrom_D1
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
118314748
NCBI-ProteinID:
XP_035497248
LinkDB
All DBs
Position
7:complement(26649536..26657365)
Genome browser
AA seq
657 aa
AA seq
DB search
MDDVSRLVSTGDCVKIWDAVSMAPLEQFNPHSVSHPVAQACWSSNNQYLVTSSSSGDKLV
VSSLKSTPVPLVDLAEGKKQTRVSLSSSSQFLVSGGLDHCVHLWDLKTKRLHRSLKDHRE
EVTCVTFNANDSYVASGSTSGDLVLHSLTTNLSSRAFGHGSNQPVHDLRLSTLRRSLLGS
VSDSGTVVLWDSNTQKELHVFDGAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLRSIRVDGPLTSVDFTLDGTGLVVGSTQGKIYQYDLRNSSAPTRVTVAHKTSVTCLRFQ
SATRLKSSKMGSTKISSTKRSSTRSSSSQPDPAPGSGPAPHRQVTGPAGVAVADGMTREA
EGQKGAEPPISSVGRNSLDVFSPARDEPRTQTTSAEMPFGRTHVTSLELLSREGEGQQVV
GRASLDIFSPVREDSLSGALTHRKTPLGTPLVASAGRCYSPLSVFQTPPPIKEEEPISAA
AAEPCDSRKSDKASSSSLEGEVPTTPPTSQQTNHSQPAPPFFTPEPSIRRPNGFQAQLSY
NSPAHGAPPTAAAGAALSAAASSTLSQDIAEVVGQGGAAPLTSLQIHFIQNMIHETLEDF
RDACHRDVVNLQVEMVRQFYIQLNEIHGLIEKYSVNESLVEEVEKLREENRRLKTNY
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtgagccgcctggtgtcgaccggagactgtgtgaagatctgggatgcggtt
tccatggcgccgctggagcagtttaacccgcacagcgtcagccacccggtggcccaggcc
tgctggagctccaacaaccagtacctggtgacgtccagcagcagcggagacaagctggtg
gtctccagcctcaagtcgactccggtgccactggtggatctggccgaggggaaaaagcag
acgcgagtgagtctgagctcgtcgtctcagttcctggtgagcggaggtctggaccactgc
gtccacctgtgggacctgaagaccaagaggctgcaccgctccctcaaggaccacagagaa
gaggtcacctgcgtgaccttcaacgcaaacgacagctacgtggcgtcgggctccaccagc
ggcgacctggtcctccacagtctcaccaccaacctgtcgagcagagccttcggccacggc
agcaaccagcccgtccatgacctgaggctgtccacgctgcggcgctccctgctgggcagc
gtgtcggacagcggcaccgtggtgctgtgggactcgaacacccagaaggagctgcatgtg
ttcgacggtgctcacaaggcgccgggctccggcctcgccttctcccccgccagcgagctg
ctggtggtcagcgtcggtctggacaagaagatcgtctgctacgacacggccagcaagatc
gtcctgaggtcgatccgggtggacggccccctgacatcggtggacttcaccctggacggt
accggtctggtggtggggtccacacaggggaagatctaccagtacgacctgagaaactcc
agcgcccccaccagggtcacggtggcccacaagacctccgtcacctgcctccgcttccag
agcgccaccagactcaagtccagtaaaatgggctccaccaagatctccagcactaaaaga
tcctcaaccagatcgtccagcagccagccagaccccgcccccggctcaggccccgccccc
cacagacaggtgacaggtccagcaggggtcgctgtggcagacgggatgacccgcgaggcc
gagggtcaaaagggggcggagccgccgatcagcagcgtcggacgaaacagtctggacgtc
ttctctcccgcacgggacgagccgagaacgcagacgacaagcgcagagatgccgttcggc
agaactcacgtaaccagtctggagctgctgtccagagaaggggaggggcagcaggtcgtg
ggtcgggccagtctggacatcttctcccccgtcagagaagactctctctcaggggccctc
actcatcgtaagacccccctggggacgcccctggtggcctctgcagggaggtgctacagc
ccgctgtccgtcttccagacgccaccgcccatcaaggaggaagagccaatcagtgctgcc
gctgctgaaccgtgtgactccaggaagtctgacaaggcgagcagttccagcctggagggg
gaggttccgaccacgcccccaacatcccagcagaccaatcacagccagccagcaccgccc
ttcttcactccagagcccagcatccggagacccaatggcttccaagctcagctgagctac
aactcgcctgcgcacggagctccgcccactgcagcagcaggcgctgctctgtcggcggcc
gcgtcctcgactttgtcccaggacatcgcagaggtggtgggacagggaggagctgctcct
ctcacctcgctccagatccacttcatccagaacatgatccacgaaacgctggaggacttc
agagacgcctgccacagagacgtcgtcaacctgcaggtcgagatggttcgacagttttac
atccagctgaacgagatccacggtctgatcgagaagtattctgtgaacgagtctctggtg
gaggaggtggagaagctgagggaagagaaccgccggctgaagaccaactactga
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