Scophthalmus maximus (turbot): 118314755
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Entry
118314755 CDS
T09850
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118314755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118314755
03036 Chromosome and associated proteins [BR:
smau03036
]
118314755
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118314755
Coactivators
SAGA/TFTC/STAGA complex
118314755
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118314755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118314755
NCBI-ProteinID:
XP_035497261
LinkDB
All DBs
Position
7:26894600..26903022
Genome browser
AA seq
981 aa
AA seq
DB search
MLQYDLHNGPTSKMAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKTPAAPFSAGSR
EAAPVAAAQFSGKVPDQVGSVEPQQGHPTAGLTREPGASEPLSGPSLSASTSSSSPAGAL
VATGAGLQTVGVAPPTASPGAGPGPATLPAAAAASFHRAAVVGPSAAPGSSVVPAAEPPG
TGSPALQSVNGSGGAVKLVNSPAAAPPAAASSVISSVIAPTAAQPGFPVPQPTVALQRHP
GPVAQNGVDPKGGPPGTPGAPSSQVLNHSKMLVPGQPVSGNTVILTSAPPPAAAPCPVSQ
TGTGTTTVTLTAAGVKPAMNGVVGQPAVAVVRPPGAPAMTTSLQQQRPGLVANSPRAAAP
QLPLAVRPQQQTTIQLPPGFTMPPGMVLVRTETGQLVMVPQQVLAQAQAKTQQAQTVASI
TQRPATPTAGATIRVSTAPTAPGSAQSVRLASPAASRVVQSPSTTVQKTITVAPGGAAVS
VKMTAPQKAATVITAGVAPTSKPAGVPSAPLTSSTPAATAPARVTVVSQEMQENVKKCKN
FLATLIKLASHNSPSPDTSKNVKGLVQDLLDAKIEPEEFTTRLQAELKSSPQPYLIPFLK
KSLPALRQSLLSSQQSLVTPAPGSLAPPPPTPGSVTATAIRPRLPVSPAGGAVRLNTPLA
NTTTLVGRAGVQPVQTRSPVLIGQTVRPAGNLVRGTTTIVGKSLINLTAQANQRKLSDPG
GGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDESFLPTGLLHRRVLD
TAKKLGVSEVPLEVVNFISHATQTRLRSLLEKVSSVALHRTDGGKDEDHHEQTTDVRSQL
RFFEQLERLEKTRKDEQEREILLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDA
NLTALAAIGPRRKRKMDSPGGGGAASSEVASGSGAGSSPASSSRQQLRQRITRVNLRDFI
LCLEQDRTTARSLLLYKALLK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctacaatacgatttgcacaacggtccgacatcaaagatggcgggagcctccgacccg
ctggaggacatgctcttcactgaggtggacgagaaagccgtgagcgacctggtcgggtct
ctggagtcgcagctgggcgacagaaagactcccgccgctccgttctccgccgggagccgg
gaggcggctccggtcgccgcggctcagttctcagggaaagtgcccgaccaagtggggtct
gttgagccgcaacaagggcatccgaccgcggggttgacccgggagcccggcgcctccgag
ccgctgtccggtccgagcctctccgcctctacctcctcctcctcccccgccggggccctg
gtcgccaccggagcggggctgcaaactgttggagtcgctcctccgaccgcttcccccgga
gcgggaccgggacccgcaactttgcccgccgccgccgccgctagcttccaccgggcggcg
gtcgtgggtccgagcgcggctcccggctcctccgttgtccccgcggcggagcctcccggg
accggctctcccgcgctgcagagtgtaaacggaagcggcggagcggtgaagttggtgaac
tcgcccgctgccgcgccaccggccgccgccagctccgtcatcagttctgtcatcgccccc
acggccgcgcagcccggtttcccggtacctcagcccaccgtggctctgcagagacacccc
ggcccggtggcccagaacggggtggaccccaagggggggccgccggggaccccgggcgcc
cccagctctcaggtcctgaaccacagcaagatgctggtcccgggtcagccggtgtccggg
aacaccgtcatcctgaccagcgccccccctccggccgcagcgccgtgtcccgtcagccag
accgggaccgggacgaccaccgtcaccctaaccgccgcgggggtgaagcccgccatgaac
ggggtggtgggtcagcctgcggtggccgtggtgaggcctccgggggccccggcgatgacc
acgtccctccagcagcagagacccgggctggtggcgaactccccccgggcggccgcgcct
cagctgcccctggccgtccggccccagcagcagaccaccatccagctgccccccggcttc
accatgccccccggtatggtcctggtccggacagagacgggtcagctggtgatggtccct
cagcaggtcctggcccaggctcaggccaagacccagcaggcccagacggtggcgagcatc
acccagagaccggccacgccgacggccggagccaccatccgggtcagcaccgccccaacg
gctccgggctcagctcagagcgtccgcctggcctcccccgctgccagccgggtggttcag
tccccctccaccacggtacagaagaccatcaccgtggcccccggcggagcggcggtgtca
gtgaagatgaccgctcctcagaaggccgcgacggtgataacagcaggggtggcgcccacc
agcaagcctgcaggcgtcccgtccgcccctctgaccagctccacccctgctgccacggcc
cctgccagagtcactgtggtgtcgcaggagatgcaggagaacgtgaagaaatgcaagaac
ttcctcgccacgctcatcaagctggcgtcgcacaactcgccgtcgccggacacgtccaag
aatgtgaagggcctggtgcaggacctgctcgatgcaaagatcgagccggaggagttcacc
actcggctgcaggcggagctgaagtcgtctcctcagccctacctcatccctttcctcaag
aaaagtctccccgccctgcgtcagtctttgctcagcagccaacagtctctggtgacgccc
gcccctggctccttggctccgcccccgcccacccccggctctgtcaccgctaccgccatc
agaccgcggctgcccgtcagtccggctggcggcgccgtcagactgaacaccccgctcgcc
aacacaacaactctggtcggtagagccggggtccagccggtccagacccggtccccggtc
ctcatcggtcagaccgtcagacccgcagggaacctcgtgagaggaaccaccaccatcgtc
ggcaagagtctcatcaacctgacggctcaggccaatcagaggaagctgagcgacccgggg
ggcgggaccttcagagatgacgacgacatcaatgacgtggcatccatggccggcgtcaac
ctcaacgaggagaacgcccgtatcctagcaaccagctcggagctggtgggcacaaagata
cgctcctgtaaagacgagtcgttcctgcccacgggcctgctgcaccgtcgcgtcctggac
acagcgaagaagcttggggtgagcgaggttcctctggaggtggtgaacttcatctcccac
gcgactcagacccgactgcgctcgctgctggagaaggtgtcgtccgtcgccctgcaccgc
acggacggaggaaaggatgaagatcatcacgaacagacgacagacgttcgctcgcagctt
cgtttcttcgagcagcttgaaagactcgagaagacgaggaaggacgagcaggagagagag
atcctgctgaaggctgccaagagtcgagccagacaagaggatccagaacaggctcgtctg
aagcagaaggccaaagagatgcagcagcaggagttggcccagatgcgtcaacgagacgcc
aacctcacggcgcttgccgccatcggaccacgcaggaaacgcaagatggactcaccagga
ggaggaggggctgcgagcagcgaggtggcctcgggctcgggcgcaggctcctcccccgcc
tcctcgtcccgccagcagctccgtcagcggattacacgcgttaacctcagggacttcatc
ttgtgtctggagcaggaccgcacgacggcccgctccctgctgctctacaaggctctgctg
aagtga
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