Scophthalmus maximus (turbot): 118314811
Help
Entry
118314811 CDS
T09850
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator isoform X1
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau02010
ABC transporters
smau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118314811 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118314811 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118314811 (cftr)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
118314811 (cftr)
Transporters [BR:
smau02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
118314811 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
SMC_N
DUF87
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
MMR_HSR1
AAA_22
T2SSE
NB-ARC
MeaB
FtsK_SpoIIIE
AAA_23
Dynamin_N
Zeta_toxin
nSTAND1
AAA_30
Motif
Other DBs
NCBI-GeneID:
118314811
NCBI-ProteinID:
XP_035497382
UniProt:
A0A8D3B937
LinkDB
All DBs
Position
7:complement(2204448..2239416)
Genome browser
AA seq
1510 aa
AA seq
DB search
MQKSPVEDANFLSKFFFWWMTPLLRKGFRKKLQLTDVYKAPSFDLADNLSERLEREWDRE
VVSAKNKPRLIRALARCFFGPFAFFGVLLYLGEASKTVQPQLLGRIIASFDPFHAPERSQ
GYFLALGLCLLFTARFLLLQPAIFGLHHLGMQIRIALFSLLYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEVNGFCALAALTLLGIIQAW
LSQKMGPHRAKRAGMISRRLALTSEIVENIHSVKAYGWEEVMETIIKNIRQDEMTLTRKI
GSLRYFYSASYFFSAILVIVSAIVPHALSKGIILRRIFTTASYCMVLRMTLTRQLPGSIQ
MWYDTLALIRKIEEFLMKEEYRVLEYNLTTSELELVNVSASWDEGIGELFEKIKQESKAN
GHLNGDAGLFFTNLYVTPVLKNISLYLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IRHSGRISFSPQTSWIMPGTIRDNILFGLTYDEYRYTSIIKACQLEEDFALLPEKDKTLL
VEGGVTLSGGQRARLGLARAVYKDADLYLLDAPFTHLDIVTEKEIFEKCICKLMASKSRI
VVTSKLEHLKRADKILLLHNGDCYFYGTFSELQAQRPDFSSLLLGLEAYDNMNADRRSSI
LTETLRRVSIDETAGFRGPEPIRQSFRQPPPPISGSQGHPVGDGYPEKRKQSLILSPLAA
ARKFSFIGNSQQTLNTPQSTTIEDGVREFSERKFSVVPEDDQVEEVLPRGNMYHHGLQHL
NGQRRQSVLAFITNAQGQERREQIQSSFRRKLSITPQCDLASELDIYARRLSKDSVYDIS
EEVDEEDMEQCFADERENIFETTSWSTYLRYITANKSLVYVLIFIVFVFVIEVAGSVIGI
FLITEKIHRDSANPSSPNYISEQHPNASSPPVHLAVIYTPTSAYYIIYIYVATSESVLAL
GFFRGLPLVHTLLTVSKRLHEQMFSAVLRAPMAVLNTMKTGRIMNRFTKDMATIDDMLPL
VLFDLIQLTLIVTGAIFTVAIMRPYIFIAAIPLAVIFVILRKYFLRTGQQLKLLEAEARS
PIFSHLIISLKGLWTIRAFGRQTYFETLFHKALNTHTATWFHYLATLRWFLFRCDIIFVL
FFSAAAFIAVGTNQDKPGEIGIIVALAMLILGTFQWAVITSITVDGLMRSVDRVFRFIDL
PSEELLPGKSGGKGGPDLIIDNPHALDCWPNRGQMDVQGLTAKYTEAGRTILNDISFSVD
GGQSVGLLGRTGSGKSTLLSALLRLASTEGEISIDGVSWSSVSLHTWRKAFGVVPQKVFI
LTGTFRMNLDPHGRHSDEELWRVAEEVGLKSVIEQFPDKLDFQLEDGGNVLSNGHKQLLC
LARSILSKARILLLDEPSAYLDPITLQVLRKTLKQAFSGCTVILSEHRVEPLLECQSFLM
IEGSSMKTYDSIQKLLNETSHMKQAMSPADRLRLFPTLHRLNSSKRAAPQNTKISSLPEE
AEDEVQDTRL
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcacctgtggaagatgcaaacttcctctccaagttcttcttctggtggatg
acaccgctgctgaggaagggcttcagaaagaagttgcagctgacagatgtgtacaaggct
ccgtcgtttgatctggcagacaacctctccgagagactcgaaagagaatgggacagggag
gtggtgtcagccaagaacaagcccaggctgattcgagcgctggcccgctgcttctttggc
cctttcgctttcttcggtgtcctcctctatctcggggaggcttccaagacggtgcagcct
cagctgctgggtcgtatcattgcttcctttgacccgttccatgcccccgagcggagccag
gggtacttcctggccctgggcctgtgtctcctcttcactgcccgcttcctcctgctgcag
cctgccatctttggcctgcatcacctgggtatgcagatccgcatcgccctcttcagcctt
ctatacaagaagaccctaaagttatccagccgtgtcttggacaagatcagtacaggtcag
ctggtcagtctgatgtccgcccacctcaacaagctggatgagagcctgggtctggcccac
tttgtgtggatcaccccgctgcagtgtatcctgtgtgtgggtctgatatgggagctgatc
gaggtgaatggcttctgcgccctggcagctctgaccctgctgggcatcatccaggcatgg
ctctcgcagaagatgggacctcaccgggcgaagcgagcagggatgatcagccgccgcctg
gctctcacctctgagattgtggagaacatccactcagtgaaggcgtacggctgggaggag
gtgatggagaccatcatcaagaacatccggcaggatgaaatgactctgacgaggaagatt
ggttcactgcgttacttctacagcgcctcatacttcttctccgccatcttggttatcgtg
tcagccattgtgcctcacgcactcagtaaaggcatcatcctgcgtcgcatcttcaccaca
gcgtcctactgcatggttctgagaatgacgctgacccgccagctgccgggatccatccag
atgtggtacgacacgctggcactgatcaggaaaatcgaggaattcttaatgaaggaagaa
tacagagtgctggagtacaaccttaccaccagtgaactggaactggtcaacgtgtctgca
tcatgggatgagggcatcggtgaactgtttgagaagatcaagcaggagagtaaagcaaat
ggacacctgaacggtgatgccggcctcttcttcaccaacctctacgtcacacctgtcctc
aaaaacatcagcctgtacctggagaagggcaagatgctggcagtggctggatccactggc
tcaggaaagagttccctgctcatgatgatccttggagagttggtgccgtcagagggtaaa
atcagacacagtggtcgcatctccttctcaccacagacttcctggatcatgccaggaaca
atccgtgacaacatcctgtttggcctgacctacgacgagtaccgctacacctccatcatt
aaggcctgccagctggaagaggactttgccttgttgcctgagaaagacaagacgctcctc
gtggagggcggggtaaccctcagcggaggtcaaagggctcgtctcggcctggccagagct
gtgtacaaagatgccgacctctacctgctggatgcacctttcacccacctggacatcgtg
acagagaaagagatctttgagaaatgcatctgtaaacttatggcctccaagtctcgcatc
gtggtcaccagcaagttggagcatctaaaacgagcagacaaaatcctcctgctgcacaat
ggtgactgctacttctacggcaccttctcagagctgcaggcccagcgcccagacttcagc
tccctcctcctcggccttgaagcttacgacaacatgaacgcagaccggcgcagctccatt
ctcacagaaactctccgcagggtctccatcgacgaaaccgccggcttccgaggtccagag
ccaattcgacagtcgttccgccagccgccgcctccaatttctggatctcaaggacatcct
gtcggtgatggctacccagaaaaacgcaaacagtcgctcatccttagcccactggcagct
gcccgcaagttctccttcattgggaactcccaacagactttaaatacaccacagtccacg
acaatagaggacggggttcgagaattttcagagaggaaattctctgtcgtgcccgaggat
gatcaagtagaggaggtgctccctcggggtaacatgtaccaccatgggttgcagcacctc
aacggtcagaggcgccagtctgtcctggcattcatcaccaatgcacagggtcaagagcgg
agagagcagattcagtcgtccttcagaagaaagctgtccataacaccgcagtgcgatctg
gcatctgagctggacatttacgcccgccgcttatccaaggacagcgtttatgacattagt
gaggaagtggatgaagaagacatggagcaatgcttcgcagatgaacgtgagaacatcttt
gaaactacctcatggagcacttacctacgctacatcaccgccaataagagcttagtctac
gtcctcatcttcatcgtctttgtcttcgtgattgaggttgctggttcagtcattggtatt
ttcctcattactgagaagatccacagggacagcgccaacccgtcctcacccaactacatc
agtgagcagcaccccaacgcctcgtcgccccccgtccacctggcggtcatctacacaccc
accagtgcttactacatcatctacatctatgtggccacatcggagagtgtgctggccttg
ggattcttcaggggtctcccattagtgcacacgttactcaccgtgtccaaaagactgcac
gaacagatgtttagcgctgtgctgcgagcccccatggctgttctcaacactatgaagaca
ggccgaatcatgaacagattcaccaaggacatggccaccatagatgacatgctgcccctg
gtgctcttcgacctcatacagctgacattgattgttacgggtgccatcttcactgtggcc
atcatgcggccgtacatctttatcgctgccatcccattggctgtcatttttgttatcctt
aggaagtacttcctacgaactggacagcaactcaaactactggaggctgaagctcgtagc
cccatcttctcccacctcatcatctcactgaagggcttatggacaattcgggcgttcggg
cgtcaaacctacttcgaaacgctgttccacaaggcgctgaacactcacacagccacctgg
ttccactacctggcaacgctgcgatggttccttttccgctgcgacattatcttcgtcctg
ttcttcagtgcggctgccttcatcgctgtgggaaccaaccaagataaaccaggggagatt
ggcatcattgtggccctggcgatgctcatccttgggactttccaatgggctgtcatcacc
agcatcactgtagatggattgatgcgctcggtggaccgggtgttcagattcatcgacctg
ccgtcagaagagctgctccctggaaagtctggtggtaaagggggccctgatctcatcatc
gacaacccccacgctctggactgctggcccaaccgcggccagatggacgtccagggcctc
actgccaaatacactgaggccggacgcaccatcctcaacgacatctccttctctgtggac
gggggtcagagcgtggggctgctgggtcgcaccgggtcggggaagagcaccctgctgtcc
gcgctgctgcgtcttgcctccaccgaaggagaaatctccatcgacggcgtgtcctggagc
tccgtctccctgcacacctggaggaaggcctttggcgtggtgccccagaaagtctttatt
ctgaccggaaccttccggatgaacctggacccacacgggcgccacagcgacgaggagctg
tggagggtggcggaggaggtgggtctcaagtcggtgatcgagcagtttccagacaagctg
gactttcaactggaggacggaggtaatgtgttgagcaacggacacaaacagctgctttgt
ctcgcacgctccatccttagcaaggcccgcatcctgctgctggacgagccctccgcctac
ctcgaccccataacgttacaggtcctgaggaagacactgaagcaggcattctccggctgt
accgtcatcctctcagagcacagagtggagccgctgctggaatgtcagtcgttcctgatg
atcgagggcagctccatgaaaacctacgactccatccagaaactcctgaacgagacgagt
cacatgaaacaggccatgagccccgccgaccggctccgcctcttccccacgctgcaccgc
ctcaactccagcaagagggcggcgccgcagaacaccaagatctcgtccctgccggaggag
gccgaggacgaagtccaggacacccgtctctaa
DBGET
integrated database retrieval system
