KEGG   Scophthalmus maximus (turbot): 118314821
Entry
118314821         CDS       T09850                                 
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
  KO
K18743  caprin-1
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118314821 (caprin1b)
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     118314821 (caprin1b)
SSDB
Motif
Pfam: Caprin-1_C Caprin-1_dimer CHD1-like_C DUF1798
Other DBs
NCBI-GeneID: 118314821
NCBI-ProteinID: XP_047189552
LinkDB
Position
7:12069006..12133118
AA seq 789 aa
MWTELQRSGALREDQREDQHTVNATNRGPFFLSAASAPGRPAGGRDADSSCTGQGDKAGL
KSSSRSRLLGQMQWKKIAGKLNMPSAMNANRAVQSASPDVGSAPGFMGNFQLGGQSEVLK
QVLCVIDKKVRNMEKKKGKLDDYQVRKDKGERLNQDQLEALSKFQEITYNLEFARELQKT
LIALGQDIQKVVKKSARREQLQREEAEQRRLKTVLELQFILDRLGDETVRQDLKQGVGGS
PLLTDADLAAFDEFYKLVGPDRDQNVRLVDQYEEASVHLWDLLEGRDKAVVGTTYKALKE
TLDQVLLSSYFDRSQSHQNGVCEEEEEEEPEAAVAAAAAAAAAAAAAASATEAATEAAAI
AAESSEAEEQTVDPETEIIEEFIEPIAVETTEFVNRQFIPDGTYSGSEKEQGDEWTTETE
AVDAMQQQPVQPATSPVALETHPMNLASPVPPADPLVRKQVVQDLMAQLQGTYNFMQDSM
LDFDGQPVDPAIVSAQPMKPAQNIDLTQMVCPPVHPESRLSQPNTVPVQPEPTQVPVVSP
TPPPMYQTSHTPDPRPPTESIDPIQTSMSLSSDQPPPSTALPPASQTQVFQPVSKTPHSS
GINVNAAPFQSMQTVFNLNAPVPPANETEALNQASQYQNSYTQAFGSQSPHPVEQTDMQA
EQLQTVVGAFHSQDQSGGHPQPPQQGPGFGRQGQSFYNSRGMSRGGPRNARGMINGYRGS
SNGFRGGYEGYRPPFNNTPNSGYGQTQFNTPRDYSNGNYQRDGYQQNYKRGAGQGPRGVS
RGSTQAMRS
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgtggacggagctgcagaggagtggagctttgagggaggaccagcgagaggaccaacac
acagtcaacgcgacaaaccgtgggcccttcttcttatcggctgccagtgccccagggcgg
cctgcaggagggagggacgcagacagcagttgcactgggcagggagataaagcagggctc
aaatccagcagccggagtcggctcctcggccagatgcaatggaagaagatcgcaggcaaa
ctaaatatgccctcagcgatgaatgcaaacagagcagtgcagtctgccagcccagatgtg
ggatccgctccagggtttatgggcaattttcaacttggtggacagtcagaagtcctgaag
caagtgctgtgtgtcatcgacaagaaggtccgcaacatggagaagaaaaaaggcaaactg
gacgattatcaagtcaggaaggataaaggggagcgactcaatcaggaccagctggaggcg
ctctccaaattccaggagatcacgtataacttggaattcgcccgagagttgcagaagact
ctcattgccctgggacaagacatccagaaggtggtgaagaagtctgcacgacgggagcag
ctgcagcgcgaggaggcagagcagaggagactgaagacggttctggagctgcagttcatc
ctggaccgactgggagacgagactgtgcgacaggacctgaagcagggagtgggtggatca
ccactgctgacggatgcagacctcgcagcttttgacgagttttacaaattagtggggcca
gaccgtgatcaaaatgtcaggttggtcgaccagtacgaagaagcatctgtgcacctctgg
gatctgctggagggaagggacaaggctgtggttggaacaacatacaaggcactgaaagag
actttggaccaggttctgctgagcagttactttgacaggtctcagtctcatcaaaatgga
gtgtgtgaggaggaagaagaggaagagccagaggcagcggtggcggcggcggcagcagca
gcagcagcagcagcagcagcagcatcagcaacagaagcagcaacagaagcagcagcaata
gctgctgaatcgtcagaagcagaagagcagactgttgatccagaaactgaaataattgag
gagtttattgagcccattgcagttgaaacaacagagtttgtaaatagacagttcattcca
gacggcacatacagtggaagtgagaaggagcagggagatgagtggaccacggaaacagag
gctgttgatgccatgcagcagcagcctgtgcagcctgcgacttcccctgttgccttggag
acccaccccatgaacttagcatctcctgtgcctcctgccgaccccttggttaggaagcag
gtggtgcaggacttaatggcacagctgcagggaacgtacaacttcatgcaggactccatg
ctggattttgatggacagccggtcgaccccgccattgtatcggcacagcccatgaaacct
gctcagaacatagacttaacacagatggtgtgtcctcccgttcacccagagtcccggcta
tcgcaacccaacacagttcctgtccaacctgagcccacgcaagtccccgtcgtctcccca
acaccgccccccatgtatcagacctcgcacacgccagatcctcgacctccaacagaatct
atcgatcccatccagacctcgatgtccttgtcatccgatcagcctcccccctctacagct
ctcccccctgcctctcagacgcaggtgttccagcccgtttccaaaactcctcacagcagt
ggcatcaacgtcaacgcagcaccattccagtccatgcagacagtgttcaacctcaatgcc
ccggtcccaccagctaatgagacagaggctttgaaccaggccagccaataccagaacagc
tacacccaggccttcggtagccagtcaccgcatcctgtggagcagacggacatgcaggca
gaacaactgcagacagtagttggtgctttccattcccaagaccagtcaggaggccatccg
cagcctccccagcagggcccgggcttcggcaggcagggtcagtccttctacaacagcaga
ggcatgtctcgtggtggcccccggaacgccaggggcatgatcaacggctacagaggctca
tcaaacggattcagaggtggttatgaaggttatcgtccacctttcaacaacactccaaac
tctggttatggacagacccagttcaacacacctcgtgattactcgaatgggaattatcag
agagatggttaccagcagaattacaagcgcggagctggtcaggggccccggggagtgtcg
agaggcagcactcaggcaatgcgatcctga

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