Scophthalmus maximus (turbot): 118314821
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Entry
118314821 CDS
T09850
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118314821 (caprin1b)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118314821 (caprin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
CHD1-like_C
DUF1798
Motif
Other DBs
NCBI-GeneID:
118314821
NCBI-ProteinID:
XP_047189552
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Position
7:12069006..12133118
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AA seq
789 aa
AA seq
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MWTELQRSGALREDQREDQHTVNATNRGPFFLSAASAPGRPAGGRDADSSCTGQGDKAGL
KSSSRSRLLGQMQWKKIAGKLNMPSAMNANRAVQSASPDVGSAPGFMGNFQLGGQSEVLK
QVLCVIDKKVRNMEKKKGKLDDYQVRKDKGERLNQDQLEALSKFQEITYNLEFARELQKT
LIALGQDIQKVVKKSARREQLQREEAEQRRLKTVLELQFILDRLGDETVRQDLKQGVGGS
PLLTDADLAAFDEFYKLVGPDRDQNVRLVDQYEEASVHLWDLLEGRDKAVVGTTYKALKE
TLDQVLLSSYFDRSQSHQNGVCEEEEEEEPEAAVAAAAAAAAAAAAAASATEAATEAAAI
AAESSEAEEQTVDPETEIIEEFIEPIAVETTEFVNRQFIPDGTYSGSEKEQGDEWTTETE
AVDAMQQQPVQPATSPVALETHPMNLASPVPPADPLVRKQVVQDLMAQLQGTYNFMQDSM
LDFDGQPVDPAIVSAQPMKPAQNIDLTQMVCPPVHPESRLSQPNTVPVQPEPTQVPVVSP
TPPPMYQTSHTPDPRPPTESIDPIQTSMSLSSDQPPPSTALPPASQTQVFQPVSKTPHSS
GINVNAAPFQSMQTVFNLNAPVPPANETEALNQASQYQNSYTQAFGSQSPHPVEQTDMQA
EQLQTVVGAFHSQDQSGGHPQPPQQGPGFGRQGQSFYNSRGMSRGGPRNARGMINGYRGS
SNGFRGGYEGYRPPFNNTPNSGYGQTQFNTPRDYSNGNYQRDGYQQNYKRGAGQGPRGVS
RGSTQAMRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtggacggagctgcagaggagtggagctttgagggaggaccagcgagaggaccaacac
acagtcaacgcgacaaaccgtgggcccttcttcttatcggctgccagtgccccagggcgg
cctgcaggagggagggacgcagacagcagttgcactgggcagggagataaagcagggctc
aaatccagcagccggagtcggctcctcggccagatgcaatggaagaagatcgcaggcaaa
ctaaatatgccctcagcgatgaatgcaaacagagcagtgcagtctgccagcccagatgtg
ggatccgctccagggtttatgggcaattttcaacttggtggacagtcagaagtcctgaag
caagtgctgtgtgtcatcgacaagaaggtccgcaacatggagaagaaaaaaggcaaactg
gacgattatcaagtcaggaaggataaaggggagcgactcaatcaggaccagctggaggcg
ctctccaaattccaggagatcacgtataacttggaattcgcccgagagttgcagaagact
ctcattgccctgggacaagacatccagaaggtggtgaagaagtctgcacgacgggagcag
ctgcagcgcgaggaggcagagcagaggagactgaagacggttctggagctgcagttcatc
ctggaccgactgggagacgagactgtgcgacaggacctgaagcagggagtgggtggatca
ccactgctgacggatgcagacctcgcagcttttgacgagttttacaaattagtggggcca
gaccgtgatcaaaatgtcaggttggtcgaccagtacgaagaagcatctgtgcacctctgg
gatctgctggagggaagggacaaggctgtggttggaacaacatacaaggcactgaaagag
actttggaccaggttctgctgagcagttactttgacaggtctcagtctcatcaaaatgga
gtgtgtgaggaggaagaagaggaagagccagaggcagcggtggcggcggcggcagcagca
gcagcagcagcagcagcagcagcatcagcaacagaagcagcaacagaagcagcagcaata
gctgctgaatcgtcagaagcagaagagcagactgttgatccagaaactgaaataattgag
gagtttattgagcccattgcagttgaaacaacagagtttgtaaatagacagttcattcca
gacggcacatacagtggaagtgagaaggagcagggagatgagtggaccacggaaacagag
gctgttgatgccatgcagcagcagcctgtgcagcctgcgacttcccctgttgccttggag
acccaccccatgaacttagcatctcctgtgcctcctgccgaccccttggttaggaagcag
gtggtgcaggacttaatggcacagctgcagggaacgtacaacttcatgcaggactccatg
ctggattttgatggacagccggtcgaccccgccattgtatcggcacagcccatgaaacct
gctcagaacatagacttaacacagatggtgtgtcctcccgttcacccagagtcccggcta
tcgcaacccaacacagttcctgtccaacctgagcccacgcaagtccccgtcgtctcccca
acaccgccccccatgtatcagacctcgcacacgccagatcctcgacctccaacagaatct
atcgatcccatccagacctcgatgtccttgtcatccgatcagcctcccccctctacagct
ctcccccctgcctctcagacgcaggtgttccagcccgtttccaaaactcctcacagcagt
ggcatcaacgtcaacgcagcaccattccagtccatgcagacagtgttcaacctcaatgcc
ccggtcccaccagctaatgagacagaggctttgaaccaggccagccaataccagaacagc
tacacccaggccttcggtagccagtcaccgcatcctgtggagcagacggacatgcaggca
gaacaactgcagacagtagttggtgctttccattcccaagaccagtcaggaggccatccg
cagcctccccagcagggcccgggcttcggcaggcagggtcagtccttctacaacagcaga
ggcatgtctcgtggtggcccccggaacgccaggggcatgatcaacggctacagaggctca
tcaaacggattcagaggtggttatgaaggttatcgtccacctttcaacaacactccaaac
tctggttatggacagacccagttcaacacacctcgtgattactcgaatgggaattatcag
agagatggttaccagcagaattacaagcgcggagctggtcaggggccccggggagtgtcg
agaggcagcactcaggcaatgcgatcctga
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