Scophthalmus maximus (turbot): 118314973
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Entry
118314973 CDS
T09850
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118314973 (ppfibp1b)
Membrane trafficking [BR:
smau04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118314973 (ppfibp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
PUMA_CC
FlaF
Phage_portal_2
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
118314973
NCBI-ProteinID:
XP_035497687
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All DBs
Position
7:complement(17730725..17751781)
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AA seq
966 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGMFDCQSPTSPFMGSLRALHLLEDLRSVLE
LMDTEERENLRCQIPDSTAESLVEWLHGHLSNGHVSLGAGDHYQERLSRIESDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRSALETQKLDLMSEVSNL
KLKLNTIEKERVDFDDRFRDSEDLILEINELRYRLTDMESEKLLYEKKLKSTKEDLVVLR
RQLEGQDGEMRRLQDETGFKAMALGSADPSERVSHPDETLRKRLKEKHVEVQRMKKAVES
LMAANEEKDRKIEELKQSLLRYKKVQEMVMSVQGKKEKTKDNELGESHDDASLALLSSIP
ASADLERQEVTDVQQLKRKSLDELESLNGMSDEPSPTPSPSDPERVSEFTPTDVESCQDT
TKTSSQDHLDRSDKSNNEKNISEEISKTSEKPPFGPPATLPATTEDDSFGSRKARSSFGK
GFFKIRGKKSGSTPNLDRSRSASAPMLAETEGRGTDHLDLAGLPQRSTNSDSTQTLPTTP
EGRKKSKGIKKLFGKLRRSQSTTFTLDDNLPEGEFKRGGVRATAGPRLGWSRDLQRVNND
VDAPFARWSKDQVCDWLQDQGLGLYVNMARVWISSGQTLLQASQQDLERELGIKHPLHRK
KLQLALQALGSEEEDNKGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLL
SLKVGSVLHHLSIKRAIQVLRLNTYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSV
DLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFNLLIGSEAQ
QLKQECLENPDYNLLTATTKVKPKKLSFGSFGSLRKKRQEESEEYVCPMDVEMPKGRSFQ
KGFELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFSEMSNSPNPSVT
DEESNA
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagcgacatgttggcagctgccctggagcagatggatggaattata
gcaggttccaaggctctggactactcaaatgggatgtttgactgccagtcgcccacctct
cctttcatgggcagcctgcgggcacttcacctcctggaagacctgcggagcgtcttggag
ctaatggacaccgaagaaagggagaatctacgctgccagatccccgactcaacggcagaa
agtctggtcgagtggctccatggtcacctgtccaatggacacgtctctctgggtgctggt
gaccactaccaggaaaggctttcccgaatagaaagtgataaggagtcactggtgcttcag
gtgagtgtgctgaccgaccaggtggaagctcagggagagaagatccgggacctggacttg
tgtttggacgagcacagggagaaactcaacgccaccgaggagatgctgcagcaggagctt
ctgtgccgatctgcactggagacccagaagcttgatctgatgtctgaagtgtccaacctc
aagctgaagctaaataccattgagaaggaaagagtggactttgatgacagattcagggac
agtgaggatttgattctggaaattaacgaactgcggtacaggttgacagatatggagagt
gaaaaactactgtacgaaaagaagcttaaatccacaaaggaggatctagtcgtactgagg
aggcagctggagggccaagacggagagatgaggagactacaggatgagacaggctttaaa
gccatggccttgggcagtgcagatccctcagagagagtctctcatccagatgaaactctt
agaaagaggctgaaagaaaaacatgtggaagtgcagaggatgaaaaaggcagttgagtca
ttgatggcagccaatgaagagaaggaccgtaagattgaggaactgaagcagtcgttgcta
cggtacaagaaagttcaagagatggtgatgtcagtgcaagggaaaaaagagaaaaccaaa
gataacgagctcggtgagagtcacgatgatgcgtcgctcgctctcttgtcgtccattccc
gcgtccgcggacctagaaaggcaagaagttacagatgttcaacaactgaaaaggaagagc
ctggatgagctggaaagtctcaatggaatgagtgacgagccttcacccacaccgagccct
tcagacccagaacgagtatccgagttcacgccaacagatgtagaaagctgccaagatacg
acaaagacgagcagccaggatcacctggacaggagcgataagagcaataatgaaaagaat
ataagtgaagaaatcagtaagacgagtgaaaagccaccttttggtccccccgccaccttg
cccgccaccacagaggacgacagcttcggctcgagaaaggctcgttcatcttttggaaag
ggtttcttcaagatccgtggcaaaaagtcaggcagcactcccaacctggaccgcagccgg
agtgcgagtgcgcctatgctagctgaaacagagggacggggcaccgaccatctggatctg
gccggtctgccacagaggtcgacgaacagcgacagtacccaaacacttcctacgacccca
gagggccggaagaaatccaagggaataaagaaactctttggaaagttaagaaggagccag
tctaccacatttaccctggatgacaacctaccagagggcgagttcaagagaggaggcgtg
cgagccacagcgggacccagactgggttggtcacgtgacctccagcgagtcaacaatgat
gttgatgctcccttcgcacgctggtcaaaggatcaggtgtgtgactggctgcaggaccag
ggtctcggtctttacgtgaacatggctcgtgtctggatctcctccggacagacgctgctt
caggcctcccaacaggacctggagagggagctgggcatcaaacacccgctgcacagaaag
aagctgcagctggctctgcaggcccttggctcagaagaggaggacaataagggaaagctg
gacttcaactgggtgacaaggtggctagatgacattggtctgccccagtataagacccag
tttgatgaggggagggtggacggccgcatgctgcactacatgacagtggatgacctgctc
tctctgaaggtgggaagtgtcctgcatcacctcagcatcaagagagctattcaagtgctc
cgactcaacacctatgagccaaactgtttgcgtcgccggccttctgatgagaacaacatt
tctccagcagagatttcccaatggaccaaccaccgggtgatggagtggctgcgttctgtg
gatctcgcggaatatgctcccaacctgaggggcagcggcgtgcacgggggcctgatggtt
cttgagccacggttcaacgtggagaccatggcgttgctgctgaacatccccccgaacaag
actctgttgcgtcgccacctcgccacacacttcaacctgctaattggctcagaggcccag
cagctcaaacaggagtgtcttgaaaacccagactacaatctgcttactgccaccaccaag
gtcaagccgaagaagctgtcgtttggtagctttggcagtctgaggaagaaacggcaggag
gagagtgaggagtacgtgtgtccaatggatgtggagatgccaaagggacgaagcttccag
aaaggcttcgagctccaaatctacgaggacgaccttgacaggctagaacagatggaggac
tccgagggaaccgtgaggcagattggagctttctccgaggggattcaaaacctgacgagc
atgctgaaagatgacgagttcttcagtgagatgtcaaattcaccgaaccccagtgtaaca
gacgaggagtccaacgcatga
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