Scophthalmus maximus (turbot): 118314999 Help Entry 118314999         CDS       T09850                                  Symbol spg11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism smau  Scophthalmus maximus (turbot) Brite KEGG Orthology (KO) [BR:smau00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:smau03400]     118314999 (spg11) DNA repair and recombination proteins [BR:smau03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      118314999 (spg11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  118314999 NCBI-ProteinID:  XP_035497748 LinkDB All DBs Position 7:complement(26420917..26439011) Genome browser AA seq 2440 aa AA seqDB search MEAAAAQRPERSPVAVAVIPQNQNCAAVADIRRAEFAPGGSLLGCLVGAPGRLVVGAPGR LVVGAPGRLVVWDPADREAPPAAADGCCTDFSWEEEDGDEEEEVSVHSRGVSGCRLVAVG RQCDLKLLQVEAERSTSISLLHVADCPAGLLQRSVQQQDHGVCELRSLRVLSFAAGRCCV LLDDDWLLRLRWRQAEAEPQILSCCSIRPTDGDRHSAVHHCVCRDTLFTLSSDGIISLYD ITDGRLLATVDLPAYLSAGLFEDHVVSTFPSSSPFCLLQVSADLSTAVAVTESHAAVAVD LDHYFRLYPDHLLCAARPALPALGPQQQLGDQDGLSSSGCCLAALGSTFSTDRSWGARLA SMYSRAQQAPPPSSQPARASWSSSLPHLESHQAPSSTHSRVPCGGATVDFSFVPESSASS LLAVSDFSAQLTFVSPGNRQTTVVSWDFESGSVSYHQAEGEAAPLQRCGEAQHRLLLKRD GVFQVLFSVSQQDLLSRLMLFGSAATVDTVCHLNSWGRCSIPIHALQAGLKNRQLDTVDF YLKSKENVLNPATTKTFSAADQPTASTPSLTDGVQELCPALDLLCSAVRDSNSEAQSRQF SEQLLNITVNFVNTQIRSVLSNSHYEDGGVRSCVGVLDRYVTELRSYMKRFPWPAGGDTT DSAAQTQREEPGDEWEELPTEELVRQSILTNQMPRAQAVLRRRSRPEQQLSALRTEGLRQ VFSRLQQRDLQTADTLLVNMGFSVKKQLHSFCLYTDDKQLREFVVEQLSRRGCFPKEEMQ SVEFIREMERLGSMPASRCSAHTARSRAVQMVRREAGAGEEVLGELVGPRRSDEDEDGGL WQNLRLDWVRNWDQSCQTDVLLSRLQHTELSSCDAAVLWRYLTALHNQHRVITWIQNRET TGAPQWPELAAELVNDDTLCSTFMRENILDLLARKGFFIPEELADLDKLLWRLAQGGGVM ASSPPIPLFRSPLGLDLHGLFVTFCLERGLKYLLYSYLEHYRLTPRNCPVLTNQSLSESQ PWFEMLVKIQEITRDLSDPALLFQASLTSAQVLLPGSQASLSSLLLEGHSLLALAAIMFA PGGIDQVLVQGSGRSGRTVDPQLLKMALAPHSKLKAALFPNGPRGHSPSSDVSVYHLLQS LHPLDPSRLFGWQAANTLNSTETSELPHFSSPQLVNKFALVENLDFLYYVCHGRPSFAFA TFLVQRLSGCGDVKLLWQQAQQQVYRLALQRFDVASVASAAVCFCELLGVCSLRLRVDIR AMNAILQHWNQHNTHSAPTQRLHSLGVKLAEAEPGAAEELIGYLEAAVADSLEQKGISRS SYEASQEWALPVQFCQLHSLELSAVYPAHCADDGQFVHFLLFVQLHSFPPQQVRSLVARF GPALQAHLNLAFQDLQLHGQRRSSSSEKPPPPPPVSLGTEEVAGSAELFQVLLRSQEQAS PGGFLLSEALVQRCPTLAVLAACQQGAELLPCLCAWVLTSVDQVTVVEATSHLLEAAQHH EWTLHDLSIIWRTLLGRGHVRPLLRGFQLFQRDCPLVLVLRMFELCCDYRNFSEAKAKLL DFQRTLVTLRSGGAVPPGGGLPLQWVESQASVLLLTMLQRCSSQYDLHRLLQLLADVDKL LKSNGPDFRKLSQLSQLLQGSEVSLSPRLLQCSSPSVQQEEFQAAVDALQAGGRYAQARQ AALLAGLPVHHLLLSQLLQELNSVRSKSQWRRLETRVSFWKKCQEQLKSDATDPGSASRF FLTQTEAEPQTEELPDVQERCLLLGLAAHWLALLSPAPVDQLQRLEKRLWVSRVRRHVLA AAMEKESVFNLPSPAVTPETNTYEALAKEFSFSNISALNEERWLGVDGLPGPGEQPDDLD FDSCLSPEDRRVLASLIGQLLDDGSIHEASRVCRYFRLYHPDVWVVLRCRGLASGELLPD PPEEAPEGEPRRSITASPSLSSLSLAAFPPPKDEVAVQLQTLLDQCRHGNNYCKQVLSLY QLSKELHVSFSHIWGAEPRGVLEMLLQSDRPERFRTARAFVRAQGLLADAVAELVSSAVT QALLASAQELQPGEDGVRAEKQVFRPSEGRDSLIQLIKLCDDPNLVGVKLLEKLDVVPLR DLSCIVELLVAAHDCFSLTCNMEGIVRVLQAARHLSHAYLAPGEHYSLMVRLLTGIGRYN EMTYVFDLLHHNHRFEMLLRKKVDMDRGQVDTHTHTHTSCSLKTALLDYIKRCLPADSEK HNMVALCFSMRREIGENHEMAARTQLKIIESQAWVVTPDLKSSLVKVLGLLKDAAESFSK DSCVRQATRCVRTAKLVALQLHFLNQGSDVRVINLRPEELLSAVVTLPRCYQVLVVSEAY GFSPDWAEVLFQKVVLGGDFVYLEELKRHRPLTSGLFEDIFKKLDAAPGSAAPNVRRLLT HCDDVYGRYRLAYQHDLYDVTKTLLQDAKTSNYLNDRLAS NT seq 7323 nt NT seq  +upstreamnt  +downstreamnt atggaggcggcggcggctcagcggccggagcgcagccccgtggccgtggccgtgatcccc cagaaccagaactgtgcagcggtagcggacatccgccgagccgagttcgctcccggaggc tcgctgctcggctgcctggtgggggccccgggccggctggtggtgggggccccgggccgg ctggtggtgggggccccgggccggctggtggtgtgggacccggcggacagagaggctcct ccggcggcggcggacggctgctgcaccgatttttcctgggaggaggaggatggagatgag gaggaggaggtgagcgtccacagtcgaggcgtcagcggctgcagactcgtggctgtcgga cgtcagtgtgacctgaagctgctgcaggtggaggcagaacgatcgacctccatctcgctg ctccatgtggcagattgtcccgcaggcctcctgcagcggagtgtccagcagcaggaccac ggtgtgtgcgagctgcggtcgctgcgtgtgttgtcattcgccgccggccgctgctgcgtg ctgctggacgacgattggctgctgcggctgcggtggcggcaggcggaggcggagccgcag atattgtcctgctgcagcatccggccgactgacggcgacagacactcggccgtccaccac tgcgtctgtagagacacactgttcacactcagctccgacggaatcatatctctgtatgac atcaccgatggccgcctgctggccaccgtcgacctccccgcctacctgagcgctggcctg ttcgaggaccacgttgtctccaccttcccctcctcttcccccttctgcctcctgcaggtg tcggccgacctcagcacggccgtggccgtcactgagtcccacgccgctgtcgccgtcgac ctcgaccactacttcaggttgtatccggaccacctgctgtgcgccgcccgccccgccctc ccggccctcgggccgcagcagcagctcggagaccaggatggcctgtcgagctccggatgc tgcctcgccgccctcgggtcgaccttcagcactgaccgatcctggggagctcgcctggcc tccatgtacagcagagcgcagcaggctccgcctccctcctcccagcctgctagggcgtcc tggtcctcctccctcccccacctggagtcccaccaggctccgtcctcgacccacagcaga gtcccctgcggtggcgcgaccgtcgacttctccttcgtcccagagtcgtcagcttcgtct ctgctcgcggtctccgacttctccgcccagctgaccttcgtctcccctggcaacaggcag accaccgtggtgtcatgggactttgagtccgggagcgtgagctaccaccaggcggagggc gaggcagcaccgctccagcgctgcggagaggcacagcaccgactgctgctgaagagggac ggcgtgttccaggtcttgttctcagtttcccagcaggacttgctcagcaggttgatgctg tttggcagtgccgcgacagtagacaccgtgtgtcacctgaacagctggggacgctgctcc atccccatccacgccctgcaggccggactgaagaaccgtcagctggacacggttgacttc tacctgaagagcaaagagaacgttctgaacccggcgacgacgaagacattcagtgctgcg gatcagccgacggcctccacaccgagcctgacggacggtgtccaggagttgtgtccagcg ttggacctgttatgttcagccgtcagagactcgaacagcgaagctcagagtcgacagttc tcagagcagctgctcaacatcaccgtgaacttcgtcaacacacagatccgctccgtgctg tccaactcgcactatgaggacggcggtgtacggagctgcgtgggcgttctggaccgctac gtcaccgagctgaggagctacatgaagagattcccctggcctgcagggggcgacaccacc gattccgccgctcagactcagagggaggagccaggggacgagtgggaggagctcccgacg gaggaactggtccgccagtccatattgaccaatcagatgcccagggctcaggccgtcctg aggaggcggagccgcccggagcagcagctgtcggccctgaggacggagggtctgcgacag gtcttctcccgcctgcagcagcgagacctccagacggcagacacactcctggtgaacatg ggttttagtgtgaagaagcagctgcacagtttctgtctttacaccgacgacaagcagctg agagagttcgtggtggagcagctgtcgagacggggttgtttccctaaagaagagatgcag agtgtagagttcatccgggagatggagcgactgggatcaatgccggcatctcgctgctcg gctcacactgcacggtccagggccgttcagatggtccgtagggaggcgggagcaggcgag gaggttctgggggagctggtgggaccgaggcggtccgacgaggacgaggacggtggactc tggcagaacctcagattggactgggtgaggaattgggaccagagctgccagaccgacgtc ctcctctccaggctccagcacacagagttgagttcctgtgacgctgccgtgctgtggcgc tacctgaccgccctccacaaccagcaccgggtcatcacatggatccagaaccgagagacc accggcgccccccagtggccggagttggcggcggagctggtgaacgacgacactctgtgc agcaccttcatgagggagaacatcctggacctgctggccagaaaaggcttcttcatccca gaggagctggcggatttggacaagctgctgtggcggctggcgcagggcggaggcgtaatg gcgtcgtctcctcccatccccctgttccgctctcccctcggcctcgacctccacggcctc ttcgtcaccttctgtctggagcgcggcctgaagtacctgctctacagctacctggagcac tacagactgactcccaggaactgccccgtcctgaccaatcagagcctgtctgagagtcag ccctggtttgagatgctggtgaagatccaggagatcaccagagatctgtcagacccagcg ctgctcttccaggccagtttgaccagcgcccaggttctgctgccaggcagccaggcgtct ctcagcagcctcctgctggagggacacagtctgctggctctggccgccatcatgtttgcc cccggaggaatcgaccaggtgctggttcagggctcgggcaggtcagggaggaccgtggac cctcagctcctgaagatggcgctggccccccactccaagctgaaggccgccctgttcccc aacgggccccggggacacagcccgtcctcggacgtctccgtctaccacctcctgcagtcg ctgcatcctctggacccgtccaggctgtttggatggcaggcggcaaacaccctcaactcc accgagacgtcagagctgcctcacttctccagccctcagctggtcaacaagttcgctctg gtggagaacctggacttcctgtactacgtctgtcatggccgaccgtccttcgccttcgcc acattcctcgtccagcggctgagcggctgcggcgatgtgaagctgctttggcagcaggcc cagcagcaggtgtacaggttggccctgcagcgttttgacgtggcgtccgtggcgtctgcc gccgtttgtttctgcgagttgctgggagtctgcagcctccgactgagggtcgacatccga gccatgaacgccatcctgcagcactggaaccaacacaacacgcactctgctcccacacag cggctacacagtctgggagtgaagttggcagaggcggagcctggagcagcagaggagctg attggctacctggaagctgcagtggcggacagtctggagcagaagggcatcagcaggtcg tcctacgaggcgtctcaggagtgggcgttgcccgttcagttctgtcagctccacagtttg gagctcagcgccgtctacccagcccactgcgccgatgacggacagtttgttcacttcctg ttgttcgtccaactgcacagcttcccgccgcagcaggtgaggtcgctggtggctcggttt ggccccgccctccaggcccacctgaacctggctttccaggacctgcagctgcacggtcag aggcgcagcagcagctcagagaagcctccgccgccaccgccggtgtctctgggcacagaa gaggttgctgggagtgcggagctgttccaggtgctgctgcggagtcaggagcaggcgtcg cccggcggtttcctgctgtcagaggctctggtgcagcgctgccccacactggccgtgctg gctgcctgtcagcagggggcggagctgctgccctgcctgtgcgcgtgggtgttgacctcc gtcgaccaggtcacggtggtcgaagccacctcccacctgctcgaggccgctcagcaccac gagtggaccctgcacgacctgtcaatcatctggaggacgctgcttgggcggggccacgtc aggcccctcctccgaggcttccagctcttccagagggactgccccctggtgttggtgctc aggatgttcgagctgtgctgtgactacaggaacttctcagaggccaaagcaaagctgctg gacttccagaggacgctcgtcaccctgagaagcggcggtgcggtgccccctggtggtgga ctccccctgcagtgggtggagagtcaggcctccgtgctgctgctcacgatgttgcagcgc tgctcctcccagtacgacctccaccgcctgctgcagctgctggccgacgtcgacaagctg ctcaagtccaacggtccagacttcaggaagctgagtcagctcagtcagctgctgcagggg tcagaggtcagcctgtctcccaggctgctgcagtgcagttctccgtccgtccagcaggag gagttccaggcggcagtggacgcgctgcaggccggggggcgctacgctcaggcccgacag gcggcgctgctcgccggcctgcccgtccaccacctgctgctcagccagctgcttcaggag ctgaactccgttaggtccaagtcccagtggaggaggctggagacccgggtcagtttctgg aagaagtgtcaggagcaactgaagtccgacgccactgatcccggatcagcctcccgtttc ttcctgacgcagactgaagctgagccccagacggaggagctgccggacgtgcaggagcgc tgcctgctgctcggcctcgccgcccactggctcgccctgctcagccccgcccccgtcgac cagctgcagcgcctggaaaagaggctgtgggtcagccgcgtccgccgacacgtcctcgcc gccgccatggagaaggaaagcgtcttcaacctcccgtcgccggcagtcactcccgagacg aacacgtacgaagcactcgcgaaggagttctccttctccaacatctcggccctgaacgag gagcggtggctcggcgtggatggactcccgggtcctggcgagcagcccgacgaccttgac ttcgactcttgcttgagcccggaggacaggagggttctcgcttctctgattggccagtta ctagacgacggcagtatccacgaggccagtcgtgtctgccgctacttccgcctgtatcac ccggacgtgtgggttgtgctgcgctgccgcggcctggcgtccggagagctcctccccgac ccgccagaggaggcgccggagggcgagccgagacggagcatcaccgcctcgccgtcgctc agcagcctgtcgctcgccgcgttcccgccacccaaggacgaggtcgccgtgcagctgcag acactgctggatcagtgtcgccacggaaacaactactgtaaacaagtcctcagcctctac cagctgtccaaggagctgcacgtgtccttcagtcacatctggggggcggagcctcgcggc gtgctggagatgctgctgcagtcggaccggcccgagcgcttccggacggcccgggccttc gtgcgagcgcagggactgttggcggacgccgtggccgagctcgtctcctccgccgtgacc caggcgctgctcgcatcggcccaggagctgcagcccggtgaggacggggtcagagcagag aagcaggtgttccgtccctcggagggtcgtgactctctcatccagttgatcaaactgtgt gacgacccgaacctggtcggagtcaaactgctggagaagcttgacgtcgttcctctgaga gacctgagctgcatcgtggagctgctggtcgcggctcacgactgtttcagtctgacctgc aacatggagggaatcgtccgggtgctgcaggccgctcgccacctcagccacgcctacctc gccccgggggagcactacagcctgatggtgcgtctgctgacgggtatcggcaggtacaac gagatgacgtacgtcttcgacctgctgcatcacaaccatcgctttgagatgctgctgagg aagaaggtggacatggaccgaggacaggtggacacacacacacacacacacaccagctgc agtctgaagacggcgctgctggactacatcaagcgctgcctccccgccgacagcgagaag cacaacatggtggcgctgtgcttcagcatgaggagggagatcggagagaaccacgagatg gccgccaggacgcagctgaagatcatcgagtcgcaggcgtgggtcgtgaccccggacctg aagagctcgctggtcaaagtgttgggtctgctgaaggacgccgccgagagtttctccaag gactcgtgtgtgcgtcaggcgacccgctgcgtgcgcacggccaagctggtcgctctgcag ctccacttcctgaaccagggctcggacgtgcgtgtcatcaacctgcgacccgaggagctg ctgagcgccgtcgtcacgctgccgcggtgctaccaggtgttggtggtgtcggaggcgtac ggcttcagtcccgactgggccgaggttctgttccagaaggtggttctgggaggagacttt gtttacctggaggagctgaaacgccaccgacctctgacctccggcctcttcgaagacatc ttcaagaagctggacgccgctcccggcagcgccgcgccgaacgtgaggcggctgctgacg cactgcgacgacgtgtacggccgctaccggctggcctatcagcacgacctgtacgacgtc accaagacgctgctgcaggacgccaagacgtccaactacctgaacgaccgactcgccagc tga

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