KEGG   Scophthalmus maximus (turbot): 118315060
Entry
118315060         CDS       T09850                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04620  Toll-like receptor signaling pathway
smau04621  NOD-like receptor signaling pathway
smau04622  RIG-I-like receptor signaling pathway
smau04623  Cytosolic DNA-sensing pathway
smau05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118315060 (irf7)
   04621 NOD-like receptor signaling pathway
    118315060 (irf7)
   04622 RIG-I-like receptor signaling pathway
    118315060 (irf7)
   04623 Cytosolic DNA-sensing pathway
    118315060 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118315060 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smau03000]
    118315060 (irf7)
Transcription factors [BR:smau03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    118315060 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 118315060
NCBI-ProteinID: XP_035497899
LinkDB
Position
7:19177029..19181475
AA seq 439 aa
MQSTPKPQFASWLIEQVETGQYTGLCYVGQNKFRVPWKHNSRRDCRDEDSKIFWAWAVAS
GKINEFPNDKARWKTNFRCALNNLSRRFKMMEDNSKNPVFQDDPHKVYEIVNTEPRHESL
PKQDSQEDSVMTPDIFSSPTVCFPAGNEYNLVNYFTALGLGNHPIEEPMLAENYCQPNAA
VPGSYPVAAENHPQVIPDQPSYYEVTPPLVLSSPLQLTIYDLEISICYRKREMLKTTLST
ERLQLHYQHEAPELNAHPLCFPSTDGLLDHKQIDYTNRILTSIQKGLLLEVRETGIYAWR
QDRCHVFASTSDPSVAHPHPTKLPQNTMVELLNIGKYVNELKKFRENNGGSPDYTINMCF
GEKFPDGKPMEKKLITVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLINSV
FGLPLTDEDPARAAADFLH
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcagagcactccgaagccccagttcgccagctggctcattgagcaggtggagacgggc
cagtacacaggtctgtgctacgtgggccagaacaagttcagggtcccctggaagcacaac
tcacgaagggactgcagggatgaggacagtaaaatattctgggcgtgggccgtcgcaagt
ggtaaaatcaacgagttccccaacgacaaggcccggtggaaaaccaacttccgctgcgcc
ctcaacaacctctccaggcgcttcaagatgatggaggacaattccaagaatcccgtcttc
caagacgaccctcataaagtctacgaaatcgtcaacaccgagccacgacacgagagtctg
ccaaaacaagactcccaggaggattctgtcatgactccagacatcttcagctctcccaca
gtgtgcttccccgcaggaaacgagtacaatctggttaactatttcacggccttgggcctc
ggcaaccatccaatagaggagccaatgttggcagagaactactgccagcccaacgcagcc
gtccccggaagttatcctgtggcagccgagaatcacccgcaggttattccagatcagccg
tcttactacgaggtaactcctccactcgtcctcagttctcctctgcagctgactatttac
gacctggagatctccatctgctacaggaaaagagaaatgctaaagaccacgttgagcaca
gaacgactccagctccactaccagcacgaggcccccgagctcaacgcccatcctctctgc
ttcccctccaccgacggcctgctagaccacaaacagatcgactacaccaaccgcatcctc
accagcattcagaagggtctgctgctggaggtccgtgagactggcatctatgcctggagg
caggacaggtgccacgtgtttgccagcaccagtgaccccagcgttgcccacccccacccg
acaaagctgccccagaacaccatggtggagctgctcaacattgggaagtatgtcaatgaa
ctgaaaaagtttagggagaacaacgggggctctcctgactacaccatcaacatgtgcttc
ggagagaagtttcccgacggaaaacctatggagaagaaactcatcacagtcaaggtggtc
ccgctgatctgtcgacactttcacgagatggcccagatggagggggcttcgtctctccac
agcgccaacgtcagcctgcagatctcgcacaacagcctctacgatctcatcaactccgtc
ttcgggctgccgctgacggacgaagaccccgcgcgggccgctgccgatttcctacattag

DBGET integrated database retrieval system