Scophthalmus maximus (turbot): 118315229
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Entry
118315229 CDS
T09850
Symbol
lsp1a
Name
(RefSeq) lymphocyte-specific protein 1 isoform X2
KO
K12327
caldesmon
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118315229 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118315229 (lsp1a)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118315229 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
O-antigen_lig
Motif
Other DBs
NCBI-GeneID:
118315229
NCBI-ProteinID:
XP_035498235
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All DBs
Position
7:5071635..5129707
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AA seq
485 aa
AA seq
DB search
MSNALLRRNSSKQGLQNLMRLTAQRSIEDAEEVEREHRRRAREALEHTNSGSTLVESSPE
NGMPTEENMYNRDFKPSSSPSLEEDEGFSDWTQRRERQRQQHLQELSQGGEEDEEENTIN
KAASVKTVRASVTSSSRLQGLKQEETDRARMEAERRKEHEEEVGKRKEVKVSYTSKVFLH
QQPKHSNSNGDATNEEVASHINSKTKRSTRAMEPEEAEAILETEQCLEKIRRGFQVKESQ
KLEQLKSRREDRHRVREEYEHQREEEEQQRLAKEELKSQTVLCRNMELNSARDWLQGGRR
WMKEDNERRRVDTAERMKSLSTSSVDGDEMFSPFSPQAPTYKITERKESLNHLLKKSNSF
KKTQPLILMSKIDDKLEQYAHAVEEAQAVKASMTDLPSSPEVISSKKNLFEAGEAWSQSP
TKGATCKDVKPGGVMQKKNMWEVIGDASGRPRQRTNKGSATCKKYKFVVTGHGKYEKIPV
DKENH
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgcactgctgaggagaaactccagcaagcagggtttacaaaacctgatgaga
ctgactgctcagagaagcatcgaggacgctgaagaggtggagagggagcatcggcgtaga
gcccgagaggctttggaacatacaaacagcggttcaacacttgtagagtcctcaccagag
aatgggatgccgacagaggagaacatgtacaatagagacttcaaacctagcagctcccca
tctctggaggaggacgaaggcttcagtgattggactcagcgcagagagagacagaggcag
cagcatctgcaggagctgagccagggtggtgaggaggatgaggaagagaacacgataaac
aaagctgcatccgtaaagactgtcagggcctctgtcacttcctccagtcgacttcaggga
ctgaagcaagaagagacggacagggccagaatggaggcggagaggaggaaggaacatgag
gaggaggtggggaaaagaaaagaagttaaagtatcatacacatcaaaagttttccttcac
caacaaccgaaacatagcaactccaatggggatgcaaccaacgaggaggtggcgtcacac
atcaacagtaagacaaagagatcaaccagagccatggagccagaggaggcggaggccatc
ctggagacggagcagtgtctggagaagatccgacgaggcttccaggtcaaggagagccag
aagctggagcagctgaagagtaggagggaggacagacaccgggtcagggaggaatatgag
caccagagggaggaggaggaacagcaacggctggccaaagaggagctaaagagccagaca
gtcttatgtagaaatatggagctgaacagtgctcgtgactggctccagggggggaggaga
tggatgaaggaagacaacgagaggaggagggtggacacagcggagaggatgaagagcctg
agcacgtccagcgtggacggggacgagatgttcagtcccttcagtccccaagctcccaca
tacaagatcacagagagaaaggagtctctgaaccacttgctgaagaaaagcaacagcttt
aagaagacacagcctctcatcctgatgtccaagattgacgacaagcttgagcagtacgcc
catgctgtggaggaggcacaggcagtgaaggcatcgatgacagacctgcccagctcacct
gaggtcatttcctccaagaagaacctgtttgaagccggagaggcctggagtcagagtcca
accaagggagcaacctgcaaggatgtgaagcctggaggtgtgatgcagaaaaaaaacatg
tgggaggtcatcggagacgcatcagggaggcccagacaacgaaccaataagggatcagca
acttgtaaaaagtacaaatttgtcgtcactggtcacggcaaatatgagaaaatccctgtg
gacaaggagaaccactga
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