Scophthalmus maximus (turbot): 118315257
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Entry
118315257 CDS
T09850
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
smau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118315257 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
118315257 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118315257 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118315257 (gtf2h1)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118315257 (gtf2h1)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118315257 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
118315257
NCBI-ProteinID:
XP_035498291
UniProt:
A0A2U9BVN9
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All DBs
Position
7:12845764..12851649
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVLKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKVQLQLVLHTGESTTFHFSNESSAIKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANKLGGVNNTDPALFNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESVFRTYPAVKEKYSENVPHNLTEKEFWTCFFQSHYFHRDRINTGTQ
DIFSECAKQDEKGLKSMVIQGVKNPFVDLLTLDDKTLDEGYGVSTTLPSTSNANRTVKES
SNYAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYDDLQRVNRPKTVPLNLKKSDRYAHGPVPLQSQQYTTSQEIINSVNYIRHEMANYKPNL
TQVLSSTVASSAIAALSPGGVLMQTGAQQAINQMIPTEVQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVMKMKSNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMFQTAYNKFHA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactctcagaggaggtgctgctggtgctgaaaaaggttcgccagaggaagcaa
gacggcacactctatctgatggctgagcgcatagcctggggtccagagggcaaggaccgc
ttcacagtcagccacctgtacgcagacatccgctgtcagaagatcagcccagacggtaaa
gccaaagttcagctccagctggtgctacacactggcgagagcaccacattccacttttcc
aatgagagcagtgcaatcaaagaccgggatgctgccaaggaactgctgcagcagctactg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagag
gatccggtgcttttccagctatataaagatctggtggtgagccaggtgatcagtgctgag
gaattctgggccaacaagttagggggcgtaaacaacacagacccagccttattcaacaac
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggcttgagatataatctgacagctgacattattgaatccgtcttcagaacatac
ccggcagtgaaggagaagtatagtgagaatgtgcctcataacctgacggagaaggagttc
tggacctgctttttccagtcccattattttcacagagaccgcatcaacacaggaactcag
gatatcttctccgagtgtgcaaagcaggatgagaagggtttaaagtcgatggtgattcag
ggggtgaagaatccttttgttgacctcctaacgttagatgataaaacattagatgagggt
tatggagttagcacaacactaccctcaacttccaatgcaaacagaacggtgaaggagagc
agcaactatgccataataaagcggtttaaccatcacagtgccatggtgctggcagcaggc
tcacgcaagggggaaacgccaacagaccaagctagtgagacgagcagcacggatggaaac
tctagggattccgacttttttcaacctcctgtaaagaaggttaagctacaagaagcaata
gaatatgatgatctccaaagagtgaacagaccaaaaacagttccgctgaacctcaagaag
tctgacaggtatgctcatggtcctgtgccacttcagtcccaacagtatacaacaagccag
gagatcatcaactctgtcaactacatccgccacgagatggccaattacaaacccaacctc
actcaggtgttgtccagcacagtagcaagttctgccatcgcagcactttcaccaggtggt
gtcctcatgcaaacaggagcacagcaagccataaatcaaatgatacccactgaggttcaa
ggagagttaaagcatctttatgtagctgctggagagctgctcagacacttctggtcctgt
tttcctgtaaacacaccatttctggaggagaaggtgatgaaaatgaagtcaaaccttgag
agatttcagatgaccaagcttcgtccttttcaggagaagattcagcgccagtacttaagt
actaatctcacggggcacttggaggagatgttccagacagcctacaacaagttccacgcc
tggcaaacccgtcggatgatgaggaaaacctga
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