Scophthalmus maximus (turbot): 118315323
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Entry
118315323 CDS
T09850
Symbol
samm50
Name
(RefSeq) sorting and assembly machinery component 50 homolog A isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118315323 (samm50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smau03029
]
118315323 (samm50)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118315323 (samm50)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
118315323 (samm50)
Transporters [BR:
smau02000
]
Other transporters
Pores ion channels [TC:
1
]
118315323 (samm50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
118315323
NCBI-ProteinID:
XP_035498428
UniProt:
A0A8D3B9V7
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Position
7:complement(1474924..1481340)
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AA seq
472 aa
AA seq
DB search
MGNVHARSLDPLPMRGPELGVQADDIEAPDIEPEPKQEFLENKDVVVQQVHIDGLGRTKD
DLLTYEIAGVFRAKNLIDVMRKSHEARQKLLRLGIFRKVEVVIDTSRGEDALPNGLDVTF
EVTELRRMTGSYNTMVGNNEGSMVLGLKLPNVLGRAEKLTFQFSYGTKETSYGLSFFKPQ
PGHFERNISFNMYKVTGQFPWSSLRETDRGISTELSFPVWKTNQTLKWEGVWRELGCLAR
TASFAIREESGHSLKSSLSHAMVIDSRNSSILPRKGGLFKIHQELAGYTGGDASFLKEDF
EIQLNKTLFWDSVLSASLWGGLLLPIGDAPTSIADRFYLGGPTSIRGFSMYSMGPQSEGV
TGDYLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPQAHLKK
LAECIRWSYGLGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtccatgcccggagcctggaccctctgcccatgcgagggcccgagcttggt
gttcaagcagatgacatcgaggctccagatattgaaccggagccaaaacaagaatttctc
gaaaacaaggacgttgtggttcaacaagtgcacatagatggactcggaagaaccaaggat
gacctgttaacttatgaaattgcaggagttttccgggcaaaaaacctaatcgatgtgatg
cggaagtctcacgaagctcgacagaagcttctgcgtcttggtatcttcagaaaagtggaa
gttgttattgacacctcacgaggagaagatgctcttcctaatggcctcgacgtgaccttt
gaggtcactgagctgagacgaatgacaggcagctacaacaccatggtcggaaacaacgaa
ggaagcatggtactgggcctgaagttgcctaatgtattaggtcgtgcagagaaactgacc
ttccagttctcatatggcaccaaagagacgtcctatggcctgtccttcttcaaaccccaa
ccaggacactttgaacgcaacatctcattcaacatgtacaaagtaacaggtcagtttcca
tggagttcactgagggagacagatcgaggaatctccactgaactgagcttccctgtgtgg
aagaccaaccaaacactaaagtgggagggagtgtggagagagctgggctgtctggctcgt
acagcctcgtttgccatccgggaggagagtggccattccctcaagtcctcactttcgcat
gctatggtcattgacagcaggaattcctccatccttccaaggaaaggtggcctgtttaag
atccatcaggaacttgctggttacactggcggagacgctagtttcctgaaggaggacttt
gaaatccaactcaacaaaacactcttttgggactctgtcctttctgcctcattgtggggc
ggtttgcttctgcccattggtgatgcaccaacaagcatagcagacaggttctatctaggt
ggccccaccagcatcaggggattcagtatgtacagtatgggcccccagagtgaaggtgtg
acaggtgactacctgggaggagaggcctactgggctggaggcctccacctctacacccct
ctacccttcagaccaggcagggggggctttggtgacctcttcagaacacacttcttcctc
aatgccggaaatctttgtaacctcaactacggtgaggggccacaagcacatttgaagaaa
ctggcagaatgcatccgttggtcatacggacttggcattgtgctgcgtttggggaacatt
gccaggctggagctgaattactgcattcccatgggagtccagagtggagacaggatatgt
gacggggtccagtttggagcaggaatcagattcctgtga
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