KEGG   Scophthalmus maximus (turbot): 118315562
Entry
118315562         CDS       T09850                                 
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
  KO
K05636  laminin, beta 1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04510  Focal adhesion
smau04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118315562 (lamb1a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118315562 (lamb1a)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C DraIII
Other DBs
NCBI-GeneID: 118315562
NCBI-ProteinID: XP_035498828
LinkDB
Position
7:27074729..27099045
AA seq 1799 aa
MLQLRLALLFALQVWTCAQEGVASVDGALDDVILPELSDVCTEGSCYPATGDLLIGRAHQ
LLSTSTCGLNRPEPFCIVSHLQEEKKCFACDSAALYDELTNHMRGHRIENVVTTFAPNRL
KTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSANFGKTWQVYRYFAY
DCESSFPHVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTRLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAAVRGAGR
AQEGMVHGHCMCNHNTKGLNCERCQEFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AAFVASGNISGGVCDDCQHNTAGNGCEQCKPFYYQHPERDVRDPNICQPCDCDPLGSLNG
GICDHMMDVRLGLIAGQCRCKIHVEGERCERCKQAHYGLSDEPEGCKACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAVNNQCDHVTGQC
ICKDHMLGRRCDQVESGFYFIALDHYTYEAEDATFGPGVTVVPRPHPQDRSPTWTGIGLV
NVPEGAFLEFSVQNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPD
DDNQMSSLHPGSRYVALPRPVCFESGLNYTVRLSLLLYSALSDVQSPYTLIDSIVLMPHC
KNLEIFTASEGGDFNGNRGWETFQRYRCLENSQSVVKTPMTDICRNFIFSISAMLHQGPK
ECHCDPQGSLSTVCDPSGGQCQCRLNVVGRNCDRCSPGTFQFGPNGCRDCACDPQGSQTP
FCDQLSGQCVCVAGAYGRQCDRCLPAHWGFPSCQLCSCNGHSDDCEPKTGLCINCRDHSA
GHSCDRCLDGYYGDAVLGSGDHCRPCMCPDGPGSQRQFAGSCYRSQDSQQALCVCNHGYR
GARCDECSPGYYGNPGEPGGQCQSCQCNDNIDMSDPESCDAQTGECLRCLYHSEGTACQN
CKLGYYGNALLQDCRKCVCNQLGSDPSSCPSSGDCHCDRSSGQCHCLLNVIGQHCDRCAT
DTWNIASGRGCQTCDCDPKHSFGTSCNEISGQCSCHPGFGGRTCSECRELFWGDPEIKCH
ACDCDARGVSEHQCHKVSGQCVCVGGVSGPRCDVCARGFSGTFPHCRRCHECFEEWDNVI
GQLTNQTHRLVNKVNALKASGISGPYKKSMDSVERSATDIRVLLNQNPASQPLTEIQHLL
QQASDLMRALSQTLNHTEQTLVQTEELDSSAETKLDSVTSDAQKLEGTVQELMDQVEFIK
NSDIRGATDSITKYFLQSQAAEARANSSTIDAGSPVETSGALRQLTEDKLNQTTEDFLRR
HTEHAQKLDDLAGELQTLDLSEISHKTCGSPSAGQDMCGSSSCGGLGCVDSEGRTRCGAE
GCDGVVMTAHSVWRKAQESEQEINSAMGGVEKLSKMVSDVKLKADEAKLIARDVLMKTNR
TKQKVDQSNEELRSLIRQIRDFLTQEAADLESIELVANEVLAMQMPTTPAQMQNLTEEIR
QKVGELGHVETILQQSSDNIQRAENLLDQARRASAEAADVKDSAEKVKRALEEAERAQTA
ASSAIQQAAADIHNTNTLLSSVQSETAEAELKLNNATKRLQRLEQDVTLLMDKAVNVTLS
TERTNHDAASIRKVADEVKKDLESDLKDKYAKVGQLIGQKAGGVADAKKRAESLQQEAKE
LLLQASDKLQLLKDLEKSYNDNHQTLEVKAELLVELEAAVKELLQEISHKVTVYSTCLF
NT seq 5400 nt   +upstreamnt  +downstreamnt
atgctgcagcttcgacttgctctgcttttcgctctgcaggtttggacctgtgctcaagag
ggcgtggcctctgtggacggggccctggatgacgtcatcctcccagagctcagtgacgtc
tgcaccgagggcagctgttaccctgcgacaggagaccttctgattggccgagctcaccaa
ctgttgtccacctccacctgtggtctgaaccgaccggagccattctgcatcgtcagccac
ctgcaggaagagaagaagtgttttgcgtgtgactcggcggcgctctacgatgagctgacc
aatcacatgaggggccatcgcatcgagaacgtcgtgaccacgttcgctccgaacagactg
aagacgtggtggcagtctgagaatggtctggagaacgtcaccatccagctgaacctggag
gcggagtttcacttcactcacctcatcatgaccttcaagacatttcgtcctgctgccatg
gtgatcgagcggtcagctaacttcgggaagacgtggcaggtttatcgttacttcgcctac
gactgcgagtcgtccttcccccacgtttcccagggtccaatgcagaaggtcgatgatgtc
atctgtgactcccgttactccgacattgagccgtctactgaaggagaagtgattttcaga
gttctggaccctgcgttcaggatcgacgacccgtacagccccagaatccagaatatgtta
aagatcacaaacctgcgggtgaagttcaccagacttcacacgctcggagacaatctgttg
gactctcgtatggagatcaaagagaagtattactacgccatctatgacatggtggtccga
ggaaactgcttctgttacggacacgcctctgagtgcgccgcggtccggggtgctgggcga
gcccaggaaggaatggttcatggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgtgaacggtgtcaggagttctaccacgaccttccctggagaccggctgaaggacgcaac
accaacgcctgcaagaagtgtaactgtaaccagcactcggactcgtgtcacttcgacatg
gccgcgtttgtggcgtcaggaaacatcagcggaggcgtctgtgacgactgtcagcacaac
acagctggaaacggctgtgagcagtgtaaacccttttactaccaacatccagagagagac
gtgagagaccccaacatctgccagccgtgtgactgtgaccctctgggttcgctcaatgga
ggaatatgtgaccacatgatggacgttcgactcggtctgattgctggtcagtgtcgctgt
aagatccatgtggagggagaacgctgcgagcgctgcaaacaggcgcactatgggctgagt
gacgagcctgaaggatgtaaagcgtgcacctgcagccctgtgggaacagttcctggagga
aacccctgtgacagtgaaacaggaagttgtttctgtaaacgtctggtgactggacgagac
tgtgaccaatgtgtgtcggaacactggggtctcagtaatgacatggacggctgcagacca
tgtgactgtgacctcggaggagccgtcaacaaccagtgtgatcatgtgaccggtcagtgc
atctgtaaagatcacatgctcggtcgtcgctgcgatcaggtcgagtctggattctacttc
attgctctggatcactacacctatgaggctgaggatgcaacatttggacctggagtgaca
gtggtgccgcggccccaccctcaggaccgcagtcccacctggacgggtattggcctggtc
aacgtcccggagggggccttcctggagttctcggtgcagaacatccctcactccatggag
tatgacatcctcatccgctatgagcctcagctgcctgaccaatgggaggaggtcctaatg
acagtgatgaggcctgggccaatcagagcagacagccgttgtgttaacactgtacctgac
gatgacaaccagatgagctcacttcaccccggctcacggtatgtggctcttccccgaccg
gtttgtttcgaatctggtctgaactacaccgtgcgcctcagtctccttctgtactcggcc
ctcagtgatgtccagtctccgtacacgctcatcgactcgattgtgttgatgccacactgt
aagaacctggagatcttcaccgcctcagagggcggagactttaatggaaacagaggttgg
gaaacattccagcgttatcgttgtctagagaacagccagagcgttgtcaagacgccaatg
acggacatctgcagaaacttcatattcagcatatccgctatgttgcaccagggacctaaa
gaatgccattgtgaccctcagggctccctcagcaccgtgtgtgacccaagtggaggtcaa
tgtcagtgtcgcctcaacgtggttggaagaaactgtgatagatgttctccgggcacgttc
cagttcggaccaaacggctgcagagactgtgcgtgtgaccctcagggttctcagactcca
ttttgtgaccagctcagtggacagtgtgtttgtgttgccggagcgtacggtcgacagtgt
gatcgatgtcttcctgctcactggggttttccttcctgtcaactctgctcctgtaacgga
cacagtgacgactgtgaacccaagactggtctctgcatcaactgcagggaccacagcgct
ggacacagctgtgacaggtgtctggatggttactatggtgacgcggtgttggggtcaggg
gaccactgtcgtccctgcatgtgtcctgacggtcccggcagccagcggcagtttgcagga
agttgttaccgaagccaagactcccagcaggctctctgtgtctgtaaccacggttacaga
ggtgctcgctgtgacgagtgctcacctggttactatggaaacccaggcgagcccgggggc
cagtgtcagtcctgtcagtgcaacgacaacatcgacatgtcggatccagagtcctgcgac
gctcaaaccggcgagtgtctgcgctgcctgtaccacagcgagggcaccgcctgccagaac
tgcaaactgggttactatggcaacgcactgctgcaggactgcagaaagtgtgtttgtaac
cagctgggcagtgatccttccagctgcccttcatctggcgactgtcactgcgaccgcagc
agcggtcagtgtcactgcctcctgaacgtgatcggtcaacactgcgaccgctgcgccacc
gacacctggaacatagcgagcggccgcggctgtcagacctgcgactgcgaccctaaacac
tcattcgggacgtcctgcaatgagatcagcggtcagtgttcctgtcaccctggctttgga
ggaagaacatgcagcgagtgtcgggagctgttctggggagacccagagattaaatgtcat
gcttgtgactgtgacgctcgtggtgtctctgaacatcagtgtcacaaggtcagtggtcag
tgcgtgtgcgttgggggcgtgtccgggccgcgctgtgacgtctgtgcacgaggattttcc
ggaacgtttccccactgccgccgctgccacgagtgttttgaagagtgggacaacgtcatt
ggtcagctgaccaatcagacgcaccgtcttgtcaacaaggtcaatgccctcaaagccagt
ggaatcagtggaccgtacaagaaatccatggacagcgtggagaggagcgccaccgacatc
cgggtcctcctgaaccagaacccggcttcgcaaccactgactgagatccagcacctgctc
caacaggccagtgacctgatgagggccctgagccagacgttgaaccacacagaacagact
ctcgtacaaacggaggaactggactcgagcgcagaaaccaaactggattctgtgacgtcg
gacgctcagaaactggaggggacggttcaggagctgatggatcaagtcgagttcatcaag
aactctgacatcagaggggcgacagacagcatcactaagtacttcctgcagtctcaggca
gctgaagctcgagccaactcctccactatcgatgccggaagcccggtggaaacctccggt
gctctacgacaactgacagaggacaaactgaaccaaaccacagaggatttcctgaggaga
cacactgagcatgctcagaaactagatgacctggcaggagagctgcagactctggaccta
tcagagatcagccataagacctgtggcagtccatcagccggtcaggatatgtgcgggtcc
tcttcctgtggaggtctgggttgtgtggactctgagggtcggaccaggtgtggagctgaa
ggatgtgacggtgtggtgatgactgcccacagcgtatggaggaaggctcaagagtctgaa
caggaaatcaacagtgccatgggcggggtggaaaaactgtctaagatggtgtcggacgtc
aagttgaaggcagatgaagcgaagcttattgctcgggacgtcctgatgaagaccaacaga
accaaacagaaagttgaccagagtaacgaggagttgagaagcctcatcagacagatcaga
gactttttaacacaggaggctgcagacctagagagcatcgaactggtggctaatgaggtt
ctggccatgcagatgcccacgacaccggcacagatgcagaacctgacggaagagatccgg
cagaaggtgggagagctgggacacgtggagaccatcttgcagcagagttctgataacatc
cagagagcggagaaccttctggaccaggcccgtcgagccagtgcggaggcagcggatgtg
aaggactcagcagagaaagtgaagcgagcgctggaagaagctgagagagcacagacggca
gcgagcagcgccatccagcaggctgccgccgacatccacaacaccaacaccctgctgtcc
tcagtgcagtcagagacggcagaagcagagctgaagctgaacaacgccaccaagaggctg
caaaggctcgagcaggatgtaacattgctcatggacaaagctgtgaatgtcactttgagc
actgaacggaccaatcacgatgcagcaagcatcagaaaggttgctgatgaggtgaagaag
gacctggagtcagacctgaaagataagtatgccaaagtggggcagctgattggtcagaag
gcagggggcgtggctgatgctaagaagagggcggagtcactgcaacaggaagccaaagag
ctgctgttgcaggcgagtgacaagctgcaactgctaaaagatctggagaagtcgtacaac
gacaaccaccagactctggaggtgaaggcagagctgctggtggaactggaggctgctgtt
aaggagctgctgcaagagatcagccacaaggtcacggtgtacagtacctgtctgttctag

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