Scophthalmus maximus (turbot): 118315562
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Entry
118315562 CDS
T09850
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118315562 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118315562 (lamb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DraIII
Motif
Other DBs
NCBI-GeneID:
118315562
NCBI-ProteinID:
XP_035498828
LinkDB
All DBs
Position
7:27074729..27099045
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AA seq
1799 aa
AA seq
DB search
MLQLRLALLFALQVWTCAQEGVASVDGALDDVILPELSDVCTEGSCYPATGDLLIGRAHQ
LLSTSTCGLNRPEPFCIVSHLQEEKKCFACDSAALYDELTNHMRGHRIENVVTTFAPNRL
KTWWQSENGLENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSANFGKTWQVYRYFAY
DCESSFPHVSQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNML
KITNLRVKFTRLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAAVRGAGR
AQEGMVHGHCMCNHNTKGLNCERCQEFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDM
AAFVASGNISGGVCDDCQHNTAGNGCEQCKPFYYQHPERDVRDPNICQPCDCDPLGSLNG
GICDHMMDVRLGLIAGQCRCKIHVEGERCERCKQAHYGLSDEPEGCKACTCSPVGTVPGG
NPCDSETGSCFCKRLVTGRDCDQCVSEHWGLSNDMDGCRPCDCDLGGAVNNQCDHVTGQC
ICKDHMLGRRCDQVESGFYFIALDHYTYEAEDATFGPGVTVVPRPHPQDRSPTWTGIGLV
NVPEGAFLEFSVQNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVPD
DDNQMSSLHPGSRYVALPRPVCFESGLNYTVRLSLLLYSALSDVQSPYTLIDSIVLMPHC
KNLEIFTASEGGDFNGNRGWETFQRYRCLENSQSVVKTPMTDICRNFIFSISAMLHQGPK
ECHCDPQGSLSTVCDPSGGQCQCRLNVVGRNCDRCSPGTFQFGPNGCRDCACDPQGSQTP
FCDQLSGQCVCVAGAYGRQCDRCLPAHWGFPSCQLCSCNGHSDDCEPKTGLCINCRDHSA
GHSCDRCLDGYYGDAVLGSGDHCRPCMCPDGPGSQRQFAGSCYRSQDSQQALCVCNHGYR
GARCDECSPGYYGNPGEPGGQCQSCQCNDNIDMSDPESCDAQTGECLRCLYHSEGTACQN
CKLGYYGNALLQDCRKCVCNQLGSDPSSCPSSGDCHCDRSSGQCHCLLNVIGQHCDRCAT
DTWNIASGRGCQTCDCDPKHSFGTSCNEISGQCSCHPGFGGRTCSECRELFWGDPEIKCH
ACDCDARGVSEHQCHKVSGQCVCVGGVSGPRCDVCARGFSGTFPHCRRCHECFEEWDNVI
GQLTNQTHRLVNKVNALKASGISGPYKKSMDSVERSATDIRVLLNQNPASQPLTEIQHLL
QQASDLMRALSQTLNHTEQTLVQTEELDSSAETKLDSVTSDAQKLEGTVQELMDQVEFIK
NSDIRGATDSITKYFLQSQAAEARANSSTIDAGSPVETSGALRQLTEDKLNQTTEDFLRR
HTEHAQKLDDLAGELQTLDLSEISHKTCGSPSAGQDMCGSSSCGGLGCVDSEGRTRCGAE
GCDGVVMTAHSVWRKAQESEQEINSAMGGVEKLSKMVSDVKLKADEAKLIARDVLMKTNR
TKQKVDQSNEELRSLIRQIRDFLTQEAADLESIELVANEVLAMQMPTTPAQMQNLTEEIR
QKVGELGHVETILQQSSDNIQRAENLLDQARRASAEAADVKDSAEKVKRALEEAERAQTA
ASSAIQQAAADIHNTNTLLSSVQSETAEAELKLNNATKRLQRLEQDVTLLMDKAVNVTLS
TERTNHDAASIRKVADEVKKDLESDLKDKYAKVGQLIGQKAGGVADAKKRAESLQQEAKE
LLLQASDKLQLLKDLEKSYNDNHQTLEVKAELLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcttcgacttgctctgcttttcgctctgcaggtttggacctgtgctcaagag
ggcgtggcctctgtggacggggccctggatgacgtcatcctcccagagctcagtgacgtc
tgcaccgagggcagctgttaccctgcgacaggagaccttctgattggccgagctcaccaa
ctgttgtccacctccacctgtggtctgaaccgaccggagccattctgcatcgtcagccac
ctgcaggaagagaagaagtgttttgcgtgtgactcggcggcgctctacgatgagctgacc
aatcacatgaggggccatcgcatcgagaacgtcgtgaccacgttcgctccgaacagactg
aagacgtggtggcagtctgagaatggtctggagaacgtcaccatccagctgaacctggag
gcggagtttcacttcactcacctcatcatgaccttcaagacatttcgtcctgctgccatg
gtgatcgagcggtcagctaacttcgggaagacgtggcaggtttatcgttacttcgcctac
gactgcgagtcgtccttcccccacgtttcccagggtccaatgcagaaggtcgatgatgtc
atctgtgactcccgttactccgacattgagccgtctactgaaggagaagtgattttcaga
gttctggaccctgcgttcaggatcgacgacccgtacagccccagaatccagaatatgtta
aagatcacaaacctgcgggtgaagttcaccagacttcacacgctcggagacaatctgttg
gactctcgtatggagatcaaagagaagtattactacgccatctatgacatggtggtccga
ggaaactgcttctgttacggacacgcctctgagtgcgccgcggtccggggtgctgggcga
gcccaggaaggaatggttcatggtcactgcatgtgtaaccacaacactaaaggtctgaac
tgtgaacggtgtcaggagttctaccacgaccttccctggagaccggctgaaggacgcaac
accaacgcctgcaagaagtgtaactgtaaccagcactcggactcgtgtcacttcgacatg
gccgcgtttgtggcgtcaggaaacatcagcggaggcgtctgtgacgactgtcagcacaac
acagctggaaacggctgtgagcagtgtaaacccttttactaccaacatccagagagagac
gtgagagaccccaacatctgccagccgtgtgactgtgaccctctgggttcgctcaatgga
ggaatatgtgaccacatgatggacgttcgactcggtctgattgctggtcagtgtcgctgt
aagatccatgtggagggagaacgctgcgagcgctgcaaacaggcgcactatgggctgagt
gacgagcctgaaggatgtaaagcgtgcacctgcagccctgtgggaacagttcctggagga
aacccctgtgacagtgaaacaggaagttgtttctgtaaacgtctggtgactggacgagac
tgtgaccaatgtgtgtcggaacactggggtctcagtaatgacatggacggctgcagacca
tgtgactgtgacctcggaggagccgtcaacaaccagtgtgatcatgtgaccggtcagtgc
atctgtaaagatcacatgctcggtcgtcgctgcgatcaggtcgagtctggattctacttc
attgctctggatcactacacctatgaggctgaggatgcaacatttggacctggagtgaca
gtggtgccgcggccccaccctcaggaccgcagtcccacctggacgggtattggcctggtc
aacgtcccggagggggccttcctggagttctcggtgcagaacatccctcactccatggag
tatgacatcctcatccgctatgagcctcagctgcctgaccaatgggaggaggtcctaatg
acagtgatgaggcctgggccaatcagagcagacagccgttgtgttaacactgtacctgac
gatgacaaccagatgagctcacttcaccccggctcacggtatgtggctcttccccgaccg
gtttgtttcgaatctggtctgaactacaccgtgcgcctcagtctccttctgtactcggcc
ctcagtgatgtccagtctccgtacacgctcatcgactcgattgtgttgatgccacactgt
aagaacctggagatcttcaccgcctcagagggcggagactttaatggaaacagaggttgg
gaaacattccagcgttatcgttgtctagagaacagccagagcgttgtcaagacgccaatg
acggacatctgcagaaacttcatattcagcatatccgctatgttgcaccagggacctaaa
gaatgccattgtgaccctcagggctccctcagcaccgtgtgtgacccaagtggaggtcaa
tgtcagtgtcgcctcaacgtggttggaagaaactgtgatagatgttctccgggcacgttc
cagttcggaccaaacggctgcagagactgtgcgtgtgaccctcagggttctcagactcca
ttttgtgaccagctcagtggacagtgtgtttgtgttgccggagcgtacggtcgacagtgt
gatcgatgtcttcctgctcactggggttttccttcctgtcaactctgctcctgtaacgga
cacagtgacgactgtgaacccaagactggtctctgcatcaactgcagggaccacagcgct
ggacacagctgtgacaggtgtctggatggttactatggtgacgcggtgttggggtcaggg
gaccactgtcgtccctgcatgtgtcctgacggtcccggcagccagcggcagtttgcagga
agttgttaccgaagccaagactcccagcaggctctctgtgtctgtaaccacggttacaga
ggtgctcgctgtgacgagtgctcacctggttactatggaaacccaggcgagcccgggggc
cagtgtcagtcctgtcagtgcaacgacaacatcgacatgtcggatccagagtcctgcgac
gctcaaaccggcgagtgtctgcgctgcctgtaccacagcgagggcaccgcctgccagaac
tgcaaactgggttactatggcaacgcactgctgcaggactgcagaaagtgtgtttgtaac
cagctgggcagtgatccttccagctgcccttcatctggcgactgtcactgcgaccgcagc
agcggtcagtgtcactgcctcctgaacgtgatcggtcaacactgcgaccgctgcgccacc
gacacctggaacatagcgagcggccgcggctgtcagacctgcgactgcgaccctaaacac
tcattcgggacgtcctgcaatgagatcagcggtcagtgttcctgtcaccctggctttgga
ggaagaacatgcagcgagtgtcgggagctgttctggggagacccagagattaaatgtcat
gcttgtgactgtgacgctcgtggtgtctctgaacatcagtgtcacaaggtcagtggtcag
tgcgtgtgcgttgggggcgtgtccgggccgcgctgtgacgtctgtgcacgaggattttcc
ggaacgtttccccactgccgccgctgccacgagtgttttgaagagtgggacaacgtcatt
ggtcagctgaccaatcagacgcaccgtcttgtcaacaaggtcaatgccctcaaagccagt
ggaatcagtggaccgtacaagaaatccatggacagcgtggagaggagcgccaccgacatc
cgggtcctcctgaaccagaacccggcttcgcaaccactgactgagatccagcacctgctc
caacaggccagtgacctgatgagggccctgagccagacgttgaaccacacagaacagact
ctcgtacaaacggaggaactggactcgagcgcagaaaccaaactggattctgtgacgtcg
gacgctcagaaactggaggggacggttcaggagctgatggatcaagtcgagttcatcaag
aactctgacatcagaggggcgacagacagcatcactaagtacttcctgcagtctcaggca
gctgaagctcgagccaactcctccactatcgatgccggaagcccggtggaaacctccggt
gctctacgacaactgacagaggacaaactgaaccaaaccacagaggatttcctgaggaga
cacactgagcatgctcagaaactagatgacctggcaggagagctgcagactctggaccta
tcagagatcagccataagacctgtggcagtccatcagccggtcaggatatgtgcgggtcc
tcttcctgtggaggtctgggttgtgtggactctgagggtcggaccaggtgtggagctgaa
ggatgtgacggtgtggtgatgactgcccacagcgtatggaggaaggctcaagagtctgaa
caggaaatcaacagtgccatgggcggggtggaaaaactgtctaagatggtgtcggacgtc
aagttgaaggcagatgaagcgaagcttattgctcgggacgtcctgatgaagaccaacaga
accaaacagaaagttgaccagagtaacgaggagttgagaagcctcatcagacagatcaga
gactttttaacacaggaggctgcagacctagagagcatcgaactggtggctaatgaggtt
ctggccatgcagatgcccacgacaccggcacagatgcagaacctgacggaagagatccgg
cagaaggtgggagagctgggacacgtggagaccatcttgcagcagagttctgataacatc
cagagagcggagaaccttctggaccaggcccgtcgagccagtgcggaggcagcggatgtg
aaggactcagcagagaaagtgaagcgagcgctggaagaagctgagagagcacagacggca
gcgagcagcgccatccagcaggctgccgccgacatccacaacaccaacaccctgctgtcc
tcagtgcagtcagagacggcagaagcagagctgaagctgaacaacgccaccaagaggctg
caaaggctcgagcaggatgtaacattgctcatggacaaagctgtgaatgtcactttgagc
actgaacggaccaatcacgatgcagcaagcatcagaaaggttgctgatgaggtgaagaag
gacctggagtcagacctgaaagataagtatgccaaagtggggcagctgattggtcagaag
gcagggggcgtggctgatgctaagaagagggcggagtcactgcaacaggaagccaaagag
ctgctgttgcaggcgagtgacaagctgcaactgctaaaagatctggagaagtcgtacaac
gacaaccaccagactctggaggtgaaggcagagctgctggtggaactggaggctgctgtt
aaggagctgctgcaagagatcagccacaaggtcacggtgtacagtacctgtctgttctag
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integrated database retrieval system