Scophthalmus maximus (turbot): 118315771
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Entry
118315771 CDS
T09850
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118315771 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118315771 (lrrc4ca)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
NGL family
118315771 (lrrc4ca)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
Ig_2
LRR_14
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
DUF4293
Syndecan
Motif
Other DBs
NCBI-GeneID:
118315771
NCBI-ProteinID:
XP_035499222
UniProt:
A0A8D3A746
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All DBs
Position
7:complement(18584489..18669888)
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AA seq
648 aa
AA seq
DB search
MLNKMTSYQQQQMMRGPRWNRALSDPLLVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLTYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDEMEMSGNQLSVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPSHHKGRYIGELDQNYFHCYAPVIVEP
PTDLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETMETPHNEGFTTTVQQKVGP
TPSAGTWESVSVTSTTTTTFRTPLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctatcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgcttgtgctgcttcttgccctccagctgcttgtagtggca
gggttggtgcgtgctcagacgtgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccgtagaggcctgcgggatgtccccgatggcatctctaccaacacacgc
tacctgaatctgcaagaaaatctaattcaggtcataaaggtggacagcttcaagcatcta
agacatctggagatcctgcagctgagcaagaaccacatacgcaaaattgagctgggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccactatc
ccaaacggggcatttgagtacctgtctaaactaaaggagctttggttgaggaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattacggcggttggacctt
ggggagctcaaacggctcacctacatttctgagggggcctttgaagggctgagcaatctc
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaaatggagatgtcggggaaccagctatctgtcatccggcctggctctttt
aaaggactcatccatttgcaaaagctatggatgatgcatgctcagatccagaccatagaa
agaaactcttttgatgacctacagtcactagtggagctcaatctagcccacaacaacctc
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccgtggaattgtaattgtgacatactctggctaagctggtggcttaaagagatg
gtacctgcaaacactagctgctgtgctcgttgtagctcaccctcccaccataagggacga
tatattggcgagctggaccagaattactttcactgttatgctcctgttattgtggagcct
cccacagacctaaatgtgacagagggaagtgctgcagagttgaaatgcagagccagctca
ttgacctctgttagctggattacacccaatggttccatcatgacacacggtgcatacaag
atcagaatctctgtgctgaatgatggcaccctgaacttcactaatgtcaccatgcaggac
acgggcacatatacatgtatggtcagtaattctgcaggtaacacaacagcatcggccaca
ctcaatgtgtcctctacagagaacagcagcttcagctacttcaccacggtaacagtggag
actatggaaacgccacataatgaaggcttcaccacaactgtgcaacagaaggtgggcccc
accccctctgctggtacatgggagtctgtttccgtcacctcgacgactacaaccacattt
cggaccccactatccactcgtgccacagagaagacttacacaatcccggtcacggagctg
ggtggtgagggctcacttaacggcttggatgaggtgatgaagacgaccaagatcatcatt
ggctgctttgttgcaatcacactaatggcagctgtcatgttgattatcttctacaagatg
cgcaaacagcatcaccagcagaaccaccacgcacccacacgcactattgagatcattaat
gtggacgaggactgtgtaacaggaggcccgggcatggagggccacctgacactgcctcct
cttgagcatgagcacctcaaccactataacacctacaagactgcatacaaccatgtctcc
actatcaactccatacacagctctgcgcacgaacctttgttaatccgggccagctcaaaa
gacaatgtacaagagacccaaatctaa
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