Scophthalmus maximus (turbot): 118315830
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Entry
118315830 CDS
T09850
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X4
KO
K06245
laminin, beta 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118315830 (lamb4)
04518 Integrin signaling
118315830 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118315830 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
118315830
NCBI-ProteinID:
XP_035499318
LinkDB
All DBs
Position
7:27043456..27069293
Genome browser
AA seq
1803 aa
AA seq
DB search
MRQYNMILIFTLLLPVTQLQDPQELQDQCPVSSCSPQLGDLMLGRAAQLSASSTCGLDGP
HNYCIIGYLEEEKKCFTCDSRLSYNHYNNQNSHRIENIITTFDPERKTKWWQSENGVHQV
SIQLDLETVFQFSHLVLSFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCSLHFPSASNEP
ADSVDDIICDSRYSGSEPSTDGEVVLKALDPVFEIQNPYAPNIQDLITLTNIRVNFTRLF
TLGDTLSRRRRNPQNKYYYALYNMVVRGSCFCNGHASRCTPVARRQGEVFTGTNMVHGRC
VCQHNTAGDNCERCQDFHHDAPWRPGGGDAVVVCRRCNCHGHSDSCHFDAVRFQATGGVS
GGVCDSCRHDRMGPQCELCRPFLYRDPQKVTDDPHACRPCDCDAAGSHGGGLCDAQTGQC
HCKENVEGRRCDRCKRGFFGLRVDDPAGCHVCRCHVMGSVGSCDQLTGSCECDNLASGPL
CDRCLVGFWGLGNSMIRCSPCDCDIGGAHSNMCSPDDGHCHCLPNMIGQRCSDPAPGYFL
PSLDYFLYEAELAAPLHGERSPSPTNTPSSSSSLLNAVLLPQCEQYYREQGFDFKFNNGQ
VVLVRRTRRLARRRRREQLTGIPLDPGHALQIIPRQRTHDRPITWTGLGLVRVLEGAGLR
FTVDNLPSSSDYQLVIRYETESPSDWLASVSIIMMSPGDGGCSSNPTGSETLTLPGNSRA
RVLDSAVCLNTGGRYFVDVIFNKQSESDGSFVLIDSMGLIPRVESIHSFCSQTDLESFQR
FGCVGLAAELDTQDSLPQLCEGLIKSTSARIHNGAVLCRCNVVGSLGPSCTKLGGFCECK
QNVIGRCCDTCAPMTFGFGPDGCKPCGCDPGGSVSELCDQVRGQCVCRSEVTGRRCDRCQ
AGLWGFPWCRPCDCGGLSDVCDQESGVCLDCRDHAAGRRCDRCLEGYYGNPVSRQPCQPC
MCPDVKGRGRFFATSCQHDPQSLSVTCHCRDGHSGPRCDRCSPGFYGDLTLPGASCAECP
CNNNIDPDDRDACDSLTGECLRCRHDTIGPGCQSCRPGYYGNALVQNCKECSCDRRGTEV
TRCPLGSSCFCDARTGQCPCRTGVVGVLCDDCEDGYWNLDGPSGCQPCSCDPVNSFSNIC
HKVTGQCQCRPEFGGRQCDECGENHFGNPDLQCISCDCNLEGTERPSCDPETGECLCRTG
VSGIFCDECSLGYSSAFPACEDCHPCTAVWAESVTDVQRAAQTMRTFIPRHGDDLRPGVD
RYRQRLSQMHSELDGLTNLTGRSLSKLDKGEKLCVRIGKLKEAIDPNMILIDPSPLLNTE
IDNIRLEFKKLLDSLKEKMIEDPYDEDDDEEEENMEELLDEIQKLRQSFLSDENKVKTSH
EALENSMDTRQEVKQKLSLCSSRGNLVPLEKKIKELSVVDLNRKICGGPGLDDCSGCGGA
LCVLPPGRRKCGGPNCDGVVGVTQNVSETTERAKDKLVSLPAPLEESRNKINNAKQVAQD
TKDQAKNSEDRIHDRLDSFEREKNQTKELIRQTKHYLMDEMVSPEDIEKMARAVLDIQLP
QSPAQIRSMITEINNLLFNTTHLQHDLRNLEEHTKTAHDLLQTAHKLRDQTKQTDVTEIR
RDIYDAEKAQDKANNDLETASRDRDMTKDQIQDIKDKVDELETKLMNRRPEGLQNEIDGL
KKKTEQNEEMARQAAETASHATDTDKDLDDVIKLFEGLNQRNSNQLVQSEAGERLKKIVE
EAENMKRQVDDKLRQIQGVEEKIEQLIRSKERKSSEVSDLLETVESLQQEISKKAEVYAL
CTS
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagtacaacatgatcctcatcttcacccttcttcttccagtgactcagctccag
gacccccaggaactccaggaccagtgtcctgtcagctcctgtagcccccagctgggtgac
ctgatgctgggtcgagctgctcagctctcagcctcgtcgacctgtggtctggacggacct
cacaactactgcatcattggatacctggaggaggagaagaaatgtttcacatgtgactct
cgactgtcgtacaatcactacaacaaccagaacagccaccgcattgagaacatcatcacg
acctttgaccctgaaagaaaaacaaaatggtggcagtctgagaacggtgttcatcaggtc
agtatccagttagatctggagacggtgttccagttcagtcacctggttctgtccttcaag
agtttccgtccagcagccatgttggtggagcgatcaaaagattttggccgaacatggaaa
gtttttcgttactttgcagaagattgttcgcttcatttcccttcagcgtccaatgagccg
gccgacagcgtggatgacatcatctgtgacagtagatactctggatcagagccgtctact
gacggagaggtggtgctgaaagcattggatcccgtgtttgaaatacaaaacccatatgca
ccaaatatccaagatctcatcactttgactaatatccgggtgaacttcactcgtctcttc
acacttggcgacactctgagtcgaagacgcaggaatcctcagaacaaatattactacgct
ctttacaacatggtggttcgaggaagctgcttctgcaacggacacgcctcccgctgtacg
cctgtggcgcgacgacagggggaagtcttcaccgggactaacatggttcacggtcgatgt
gtttgtcagcacaacacagctggagacaactgtgagagatgtcaggactttcaccacgac
gccccctggaggcctggaggaggagacgcagtggtcgtctgcaggagatgtaactgtcac
ggtcactcggactcgtgtcactttgatgctgttcgtttccaagcgacgggcggcgtgagc
ggtggcgtgtgtgacagctgccgccatgacagaatggggcctcagtgtgaactgtgtcga
ccttttctatatcgggatcctcagaaggtgacggatgaccctcacgcctgcagaccttgt
gactgtgacgcagctggttctcacggcggcggtctttgtgatgcccagaccggtcaatgt
cactgtaaagaaaatgtggagggtcgacgctgcgaccgctgcaaacgtggcttctttggc
ctgagagtggacgacccggctggttgtcatgtgtgcaggtgtcacgttatgggaagtgtt
gggtcatgtgatcagctgacaggaagttgtgaatgtgacaatttggcaagcgggccgctg
tgtgatcgatgtctggtcggtttctggggtttgggaaactcgatgatcagatgttctccc
tgcgactgtgatatcggaggagctcacagtaatatgtgttctccggacgacggacactgt
cactgtttaccaaacatgattggtcagcgctgctctgaccccgcccccgggtacttcctg
ccttcgctggactacttcctgtatgaggcagaactcgccgcaccactgcatggagaaaga
tctccttctccgacaaatactccgtcatcatcttcttctctgctgaatgcagtactttta
ccacagtgtgagcagtactacagggagcagggttttgactttaaattcaataatggacaa
gttgttctggttcggaggactcgtcgacttgcccgtaggaggagacgggaacagctgact
ggcatccctctggacccgggtcacgcccttcagatcatcccccgccagaggacacatgat
cggccgatcacctggacaggcctgggattggtcagagtgttggagggggcggggcttcgg
ttcactgtggataacctgccgtcatcatcggattaccagctggtcattcgttacgagaca
gagtctccgtctgattggctggcttcagtcagcatcataatgatgtcaccgggtgatggt
ggctgcagcagcaatccaacaggaagtgaaactttgactcttcctggaaactccagagct
cgtgttctggactcggccgtgtgtctgaatacaggaggtcgttactttgtggacgtcatc
tttaataaacaatctgaatctgatggatcattcgtcctgattgactcgatgggtctgatc
ccccgagtcgagtctattcacagcttctgctctcagacggacctggaatctttccagcgg
tttggctgcgttggtttggctgctgagctcgacacacaggattcactccctcaactctgt
gagggactgatcaagagcacgtcggcacgaatccacaacggagccgttctttgcaggtgt
aacgtcgtcggctccctcggaccgtcctgcaccaaactgggcgggttctgtgaatgtaaa
cagaatgtgattggtcgttgctgtgatacttgtgcaccaatgacatttggctttggaccc
gacggctgcaaaccctgcggttgtgaccctggaggctcggtgtcggagctgtgtgaccag
gtcagaggtcagtgtgtgtgtcgctccgaggtgacggggcgtcgctgtgaccgttgtcag
gcgggactgtggggtttcccgtggtgtcgaccctgtgactgtggcggcctgtcagacgtg
tgcgaccaggagagtggagtgtgtctggactgcagagatcacgccgccggacgtcgctgt
gacaggtgtttggagggttactatggaaaccctgtctccaggcagccctgtcagccctgc
atgtgtccagacgtgaagggcagaggacggttctttgccacttcctgccaacacgaccca
caatccctcagtgtaacgtgtcactgcagggacggacactcaggtccacgatgtgacaga
tgcagccctggtttctatggtgacctgacgttgccgggtgccagttgtgccgagtgtccc
tgcaacaacaacatcgacccagacgaccgcgacgcctgcgacagtctgacgggcgaatgt
ctgcgctgccgccacgacacaataggaccaggctgccagagctgcagacctggttactac
ggcaacgctttggtccaaaactgcaaagaatgctcctgtgaccggcgtgggacggaggtg
acccgttgtcctctggggagttcctgtttctgtgatgcgaggacaggacagtgtccatgc
aggacgggcgtagtgggcgtcctctgtgacgactgtgaggacggatactggaacctggac
gggccgtcgggatgtcagccctgcagctgtgaccccgtgaactccttctccaacatctgc
cacaaggtgacgggacaatgtcagtgtcgtcccgagtttggagggagacaatgtgatgaa
tgtggagaaaatcattttgggaatccagacctgcagtgtatctcttgtgactgtaacctg
gagggaaccgagcgtccgtcatgtgaccctgaaaccggcgagtgtctctgtcgaaccggc
gtttctggtatcttctgtgacgagtgttccctcggatacagctcagcgttcccggcctgc
gaggactgccacccctgcaccgccgtctgggctgaaagtgtcacagacgtccaacgagcc
gctcagacgatgagaaccttcatccctcgccacggcgatgacctgcggcctggtgttgat
cgctaccggcaacggctgtcgcagatgcactcggagttggatggcctgaccaacctcacg
ggacggtccctgtcgaagttggacaagggggaaaaactttgtgtcaggattgggaagttg
aaagaagccattgacccaaacatgatcctgatcgatccgtctcctctgctcaacactgaa
attgacaacattcgtctggagttcaagaagcttctggacagtttgaaggagaaaatgatc
gaggatccatatgatgaagatgatgatgaagaagaagaaaacatggaagagcttctggac
gagatccagaagcttcgtcagagcttcctgtcggacgagaacaaggtgaaaacttcccac
gaagctttagagaactccatggacaccagacaggaagtcaaacagaaactgagcctgtgc
agcagcagaggaaacctggttccactggagaagaagatcaaagagctgagtgtggtcgac
ctcaaccgaaagatttgtggaggaccaggtctggacgactgttcaggatgtggtggagct
ctgtgtgttttgcctccgggacgaaggaaatgtggaggtccaaactgtgacggagtcgtt
ggtgttactcagaacgtttcagaaacaacagagagagcaaaggacaaactcgtctcactc
ccggctccactggaggagtccaggaacaagatcaataatgccaaacaggtcgctcaggat
accaaagaccaggccaaaaactcggaagaccggatccacgacagactggactcctttgag
agagagaagaaccaaaccaaggagctcatccggcaaaccaaacactacttgatggatgag
atggtttctcctgaagacattgagaaaatggcccgagctgttctggacatccagttgcca
caatcacctgctcagatccgatcaatgatcactgaaatcaataatctactattcaacact
acacacctccagcatgacctgaggaacctggaggagcacaccaagactgcccacgacctg
ctgcaaacagctcacaaactaagggatcagacaaagcaaactgatgtgacagagatcaga
agagacatttatgatgcagagaaagctcaggacaaagccaacaatgacctggaaacagcg
agccgagacagggacatgaccaaagaccaaatccaagatatcaaagacaaagtggacgaa
ttagagacgaagctgatgaatcgtcgacctgaaggtctgcaaaacgaaatcgacggtctg
aagaagaaaactgaacaaaacgaagagatggccagacaggcggcggagaccgcttcacac
gctacagacacagacaaggatctggacgatgtgataaagttatttgaaggtttgaatcaa
agaaactcaaaccagttggttcagagcgaagccggagaacgactgaagaaaatcgtggag
gaggcagagaacatgaagagacaggtggatgacaaactcagacagatacaaggtgtggag
gagaagattgagcagttgatcagaagtaaagaaaggaaatcatctgaagtctctgatttg
ttggaaactgtcgaatcacttcaacaggaaatctctaaaaaggcagaagtatatgctctc
tgtacttcataa
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integrated database retrieval system
