Scophthalmus maximus (turbot): 118316211
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Entry
118316211 CDS
T09850
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00310
Lysine degradation
smau01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118316211 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118316211 (prdm2a)
03036 Chromosome and associated proteins [BR:
smau03036
]
118316211 (prdm2a)
Enzymes [BR:
smau01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
118316211 (prdm2a)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118316211 (prdm2a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118316211 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2H2_ZNF462_1st
Zn_Ribbon_YjdM
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
118316211
NCBI-ProteinID:
XP_035499677
LinkDB
All DBs
Position
3:15410758..15431493
Genome browser
AA seq
1371 aa
AA seq
DB search
MEESAHPYCSDFGDNEDMEEEGDIYREETDMVTSLYQDLHKHPNQDTERVWESFPCQHCE
RHFTSKQGLERHMHIHALANNEAQPYKSNKSDMSLGSNLGQPQHEKMKPLDRHTLSPTTS
NTFILSAEDHTAQPDKQRELDSRMFHEQHLQLVHEENKELPEEESLQSIFIETSKLETQL
GDNIAPATVLGNEGQHTEQYMLDVSSNVSENLSFYIGGKIVSTSTVSSCEAAEVHSGSSA
LVGLDALILDPTQISQILNTDSVPGKEIPGQPLAKRRTATPPLLPQIKTELESEVVVSSS
SSSLVSSLIENLLPLHTESTVVQKERTVFLSPKLKQLLEKQDGLNPTFALITDGEKPCSP
VSLSVLPAGTGRFKRRTGSPTGSPQQNPTSNEETPTPDSENFVAESTGQLEPQHISPVHL
TASEKEDSPPAVEEPAVTPVSTESWPPLTGGNSCNQQPLDLSNTVKRNEDLALTEAVLDL
SLQKKIFGESELMLNLVSQVLLEEVTSNTCMVEKPLMNIGEQNVSVGNSETHLVTDFNIV
TGSDMVTPVAERLVYGLALPPTSLTPSSTCLTSVAFPPATPCTIAFSSPASHTMLSSAPS
LITVLAPPPAINNPSIQPIQVLGPNISPEPLVICTENALNSPECNLTAAFATTNSANLVT
LSQPLDSTLNLPGNVFLTDQISLNPPIVDSTPVSEVPFAPTVTLNDSLINSFNITSNTVL
IECTIALDTPGSVVPASISLQENPSEDPVPTQMVVNHIEQQQIVSVPDAQTLDPTILVST
IAESVTLSTTTTSMVSDCPSLGESSPNPEPAVNAKTPTIKEEEEAADDVVSIPEIPSKTS
PSFEKAEQDKSSNDTPGDAQQQTFTKNFICNVCDKLFHSMKELGHHVGDHAAEWPYKCEF
CVLLFGRPSALLDHRSSLHGVGKTYVCSACTKEFVYLCNLKHHQEELHPGQQCTYTEEEK
GKLRPQNYNNSTKVTAEPSVPHVPEDPKTVVKKEESEVDVAAEELFTTIKILASDGGKVK
GPDVRLGINQHYPSFKPPPFPYHNRSPAGSVASATNFTTHNIPQTFSTAIRCTKCGKSFD
NMPELHKHILACANASDKRRYTPKRNPIPLRHVAKTQNGVLSTTNSTNGLNASNRASHSN
RSKPNQESPMKMKFKVLSKRKKKLVQRVMPQRNKSVSSSNKATPTQVDVQHEVFVCPHCS
REFSMRRSRTKHMAVCPKKPKEVKKRKEGGISVTKENDQRLHRGSSRAEEKRQQASPQHK
TRFQTSGLAKRPAILPVQTVFSNKRSKIIIKESMQPKQETPTLNELPIVRTFNPSMRQYS
RVQHGVKGIPIKITIVKPRSTAPQRDELLPTQSREETTGDVSSSSEQSAST
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatccgctcacccatactgctctgactttggagacaatgaggatatggaggag
gagggggacatttatcgagaggaaactgacatggttacctctctataccaagatcttcac
aaacatcccaatcaggatactgagagagtttgggagtcttttccctgccagcactgtgag
agacatttcaccagcaagcaaggcctggaacgacacatgcacatccacgctttggctaac
aacgaggcacagccatacaaaagcaataagagcgacatgtctttaggttcaaatctaggt
cagccgcagcatgagaagatgaagccactggatcgtcatactttatcccccacgacctct
aatactttcattttgtcagccgaagaccacacggctcagccagacaaacagagagaatta
gatagtcgcatgttccacgagcagcacctgcaactcgtacatgaagaaaacaaagagctg
cctgaggaggaaagtcttcagagcattttcattgaaacgtctaaactggaaacacagctt
ggcgacaacattgcacctgctactgttctggggaatgaggggcaacacacagaacaatac
atgctagacgtttctagcaatgtttcggagaatctcagcttttacattggtggaaagata
gtgtcgacaagtacagtaagtagctgcgaagcggctgaggttcattcaggttcttcagct
ttagttggactggatgccctgattctggaccccacccaaatcagccagattttgaataca
gattcagttccaggcaaagagatacctggtcaaccacttgctaagaggagaactgctaca
ccgcctctcttaccacaaattaaaactgaactggagtctgaagtggtggtgtcctcttcc
tcctcatcccttgtatcctcactaattgagaatctgcttcctctgcatacagagtccacc
gttgtgcagaaggagagaacagtgtttctgtctcctaagctgaagcagcttctggagaag
caggatggccttaacccgacatttgccctgatcacagatggtgagaagccctgttcgcct
gtctctctctctgtcctgcccgctggaacaggaaggtttaaaagaaggaccgggtctcca
acaggttccccacagcaaaacccaacatcgaacgaagaaacgccgacgccagattctgaa
aattttgttgctgaaagtacaggacagttggagccccagcatatctcacctgtgcatcta
acagccagtgagaaggaggactcgccgccagctgtggaggagccagcagtgacacctgtc
tcaacagagagctggccccccttgactggtggcaattcctgtaaccagcaaccactagat
ctctctaacacagtcaaaagaaacgaagatttagctttaactgaggccgtgctggattta
agtttgcagaaaaagatcttcggtgaatctgagctgatgctaaatttagtttcgcaggtg
cttttggaagaagttacatcaaacacatgcatggtggagaaacccttaatgaatatcgga
gagcaaaatgtaagcgtggggaattctgagactcatttagtcacggactttaacatagtc
actggttcagatatggtgaccccagttgcagaaagacttgtttatggacttgccctaccc
ccgacttctctaaccccatcatccacctgcctcacctctgttgccttcccaccagctaca
ccatgtactatagcattttcttcccctgcctctcacaccatgctctcttctgcaccttca
ttaatcacagttttggcaccaccaccagccattaataacccttcaatccaaccaatccaa
gtattaggccctaatatatctcctgagcccttggtcatctgcacagaaaatgcattaaac
tctccagagtgcaatttaaccgctgcatttgccaccacaaattccgcaaaccttgtcact
ctctcccagcccctcgactcgactttaaatctgccgggcaacgtgtttctcaccgatcag
atttctctcaatccacctattgttgactcaactcctgtgtcagaagtaccattcgcaccc
actgtaactttaaatgactccctcatcaactcttttaacattaccagtaacacggtgttg
atagagtgcacaatagcgctcgacaccccaggcagtgtagtccctgcttcaatttcctta
caagaaaacccttctgaggatccagtacctacacagatggttgttaatcacatcgaacag
caacagattgtatcagtgcccgacgctcaaactctggaccccacaattcttgtgtccacc
attgcagaatcagtaactctgtccactaccaccacctcaatggtgtctgattgtccctct
ttgggggaatcgagtcccaacccagaacctgcagttaatgcaaaaacaccaaccataaaa
gaagaagaagaagctgctgacgatgttgtatccatacctgaaataccatctaaaacttcc
ccctcttttgagaaagctgaacaggacaaatcctcaaatgacacaccaggtgacgcacaa
cagcagactttcaccaagaacttcatctgcaatgtgtgcgataagcttttccattcaatg
aaagaactcggccatcacgtaggtgaccatgctgctgaatggccctacaaatgtgaattc
tgcgtgctgctcttcggtaggccctctgctttgctcgaccatcgatcaagcctccacggt
gtgggcaagacttatgtatgcagtgcatgtacaaaagagtttgtctacctctgcaatctg
aaacaccatcaggaggaattgcaccctggccagcagtgtacatacacagaagaagaaaag
ggcaaactaagacctcaaaactacaacaactcgacaaaagtcacagcggagccttcagtg
ccccacgttccagaggatcccaagacagtagtgaaaaaggaggaaagtgaagtagatgtg
gccgctgaggagctgtttacaacgataaaaatcctggcctcagatggagggaaagttaaa
ggaccagacgtccgtcttggcattaaccaacactatcccagcttcaagcctcctccattt
ccttaccacaacaggtcgcccgccggctcagtggcttcagcgacaaacttcaccacccac
aacatcccacaaacgtttagtacagccattcggtgcaccaagtgtggaaagagctttgat
aacatgccagagctacacaagcatatcctggcttgtgcaaatgccagcgataaaaggcga
tacacaccaaaaaggaatcctatccctctaaggcacgttgcaaaaacccagaacggagtg
ctgtcgactactaattctactaacggactaaatgcttccaacagggccagccactcaaac
aggtccaaacccaatcaagagtcgccaatgaaaatgaaattcaaagtactgagcaaaagg
aagaaaaagttggtccaaagggttatgccacagaggaacaagtcagtttcatcttcaaat
aaagcgacgcccacacaggtggatgtgcagcacgaggtgtttgtctgcccacactgtagc
agggagttcagcatgcgtcgcagcagaaccaaacacatggccgtgtgccccaagaaacct
aaagaggtgaagaaaagaaaagaagggggaatctctgtgacaaaggaaaacgaccaacgc
ctgcacagagggagctctcgcgctgaagagaaacgacaacaagcctcacctcagcataaa
actagattccagacctctggcctcgcgaagaggccggccatcctaccagtgcagactgtc
ttttcaaacaaaagaagtaaaataatcataaaggagagcatgcagccaaaacaggagacg
cccactctgaatgaacttcccattgttcgcactttcaacccctctatgcgccagtacagc
cgagtgcagcatggcgtcaaaggaattcccattaaaatcaccatcgtgaaaccacgatca
actgcaccgcagagggatgagctgcttcccacccagagccgagaggaaaccactggagat
gtttccagcagctctgagcagagcgcttcaacttga
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