Scophthalmus maximus (turbot): 118316219
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Entry
118316219 CDS
T09850
Symbol
mkrn4
Name
(RefSeq) makorin, ring finger protein, 4 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118316219 (mkrn4)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118316219 (mkrn4)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118316219 (mkrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-RING_2
zf-C3HC4
zf-UDP
zf-C3HC4_4
zf-CCCH_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-CCCH_3
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118316219
NCBI-ProteinID:
XP_035499690
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All DBs
Position
3:13256336..13261492
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AA seq
393 aa
AA seq
DB search
MTSPPRNERLKDGSDLTSRALRATTATSRSHWLVARLIGERHFLSGSCRFGPRCHYRHEW
PVIQSAQICRHFQKGVCWYGERCRFLHVLQSDVDAAVAGRRGSVPAVSSTSRVARAQPDR
RGSEPTLMQAQMLSRHDCSRSGRLAHISNSNIGRLAVNITVEESQDTESLTASLESVQSS
NAAEAGASDRRNEQQTSSTETTEEGAAAAASGTQGEVEALLQSKNVTCGICMDKVYEKTD
LREQVFGILPNCSHAFCLQCIMTWRKMKDFEPDVVKSCPQCRVRSAFYVPNKYWVEGQAK
ESVIVAFKEKCRRKSCIYYARYGCCPFKTECLYRHDKSTRRRSFTYPTEDEDDYDGLDLL
NFFIAMTLLSGDDDDDVDDYDFTFSDLTEEYGF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaccgccgcgtaatgagcggttgaaagacggatctgatctgacgtcgcgagcg
ttacgtgcaacaacggcgacgtcacgttcccattggctcgtcgctcggttaattggcgaa
aggcatttcttgagtggctcttgcagatttggtccaagatgtcattatcgacatgagtgg
ccagttatacagtcggctcaaatctgtaggcactttcagaaaggtgtttgctggtatggt
gaacgctgcaggtttctccatgtccttcagtctgacgttgatgcagcagttgcaggtaga
agaggttcggtgcctgccgtgtcctccacctcccgtgtggctcgcgctcaacctgacaga
agagggtctgagccaacgctcatgcaggcccagatgctgtccaggcacgattgcagccga
tcagggaggctggctcatatctcaaattccaacattggacgcctggcagtaaatatcact
gtggaagaatcacaagatactgaatctctaactgcttctctggaatcggtccaaagctca
aatgctgctgaagcgggtgcaagtgatagaagaaatgagcagcagacctcttcaactgag
acaacagaggaaggggctgcggctgcagcctccggtacccagggggaagtggaggctctg
ctccagagtaaaaacgtgacctgtggcatctgcatggacaaggtgtatgaaaagacggat
ctacgagagcaagtatttggaatattgccaaactgcagtcacgccttctgtttacaatgc
ataatgacctggaggaaaatgaaagactttgagccagacgtggtaaagagctgcccacaa
tgtcgagtgagatctgccttttatgtgccaaacaaatactgggttgaagggcaagcaaaa
gaaagtgtgattgtcgccttcaaagagaaatgcagaaggaaaagctgcatttactatgca
cgttacggatgctgccccttcaaaacggagtgcctttatcgacatgataaatctacacgt
cgcagatcatttacatatcctacagaagatgaagacgactacgatggcttagatctactt
aattttttcatagccatgacccttctcagtggtgatgacgatgacgacgttgatgactat
gactttaccttttccgacctaacggaggagtatggtttctga
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