Scophthalmus maximus (turbot): 118316233
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Entry
118316233 CDS
T09850
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03266
Virion - Herpesvirus
smau04145
Phagosome
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
smau04517
IgSF CAM signaling
smau04518
Integrin signaling
smau04810
Regulation of actin cytoskeleton
smau04820
Cytoskeleton in muscle cells
smau05100
Bacterial invasion of epithelial cells
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118316233 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118316233 (itga5)
04517 IgSF CAM signaling
118316233 (itga5)
04518 Integrin signaling
118316233 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118316233 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118316233 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118316233 (itga5)
04810 Regulation of actin cytoskeleton
118316233 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118316233 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118316233 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118316233 (itga5)
04515 Cell adhesion molecules [BR:
smau04515
]
118316233 (itga5)
04090 CD molecules [BR:
smau04090
]
118316233 (itga5)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118316233 (itga5)
Cell adhesion molecules [BR:
smau04515
]
Integrins
Integrin alpha subunits
118316233 (itga5)
CD molecules [BR:
smau04090
]
Proteins
118316233 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
118316233
NCBI-ProteinID:
XP_035499723
UniProt:
A0A8D3BGT1
LinkDB
All DBs
Position
3:3536908..3573189
Genome browser
AA seq
1060 aa
AA seq
DB search
MGLERFRVKTQRTVALLPRALLCAIVGLSLPAPPPACEAFNLDVESPAVYSGPRGSYFGY
AVDFYLADSSSASVVIGAPKANTRQVNVTEGGSVFYCPWNLGQSDCHAIEFDAEGDRSVS
LNNTEHQVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDTPHSDATGTCYLSIHNFTK
FVEYAPCRTEISGEGGQGYCQGGFSADFTSDGKVVLGGPGSYFWQGQVISAAKEDIIKAY
YPGYFMQSVEGQIQTKQVHSAYDDSYQGYSVAVGEFSGDQVEDFVAGVPKGLMLYGSVSI
LNGTDLKTMINYTGEQMGSYFGYAVATTDINSDGMADLLVGAPMFMVRGSGGRLEEMGRV
YVYLQRGPLNMELRLPHITGTQAFGRFGSTIAPLGDLNQDGFNDVAISCPFGGEDRQGLV
YIFNGYSGGLREKPSQVIAGQWAAGTIPASFGFSLRGAKDLDMNGYPDLIVGAFGVNKAV
LYRSRPIVNASASLTVYPTMINPEEKSCMVTSGNTSVPVSCVNLSFCISADGKHLPGVLD
FQVEVQLDSRKHKQKGAVKRALFLDSQQPLLRRSVRVRHGERVCNHTKIYLRDEKEFRDK
LSSIHVALNFSLDPEAAADSHGLRPILNYQTTDVIEQKAQILLDCGEDNICVPDLKLAVH
GDKREVYLGDDNSLTLTFNAKNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSF
EMENQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHRTVQFEMQIRSKNENNSHSEAV
PYKLEVVVQAEVILQGVSRPDKVFFPPANWKVTKNYGAEQDVGPAVEHIYELVNNGPSRI
SHTLLELRCPLSVQGHNLLYPLEFSTEGPVNCTADRNMNHLHLKLQHTSTEPPILALKAQ
EHRVERRDVHRNQLAHLTNLSCSNVECWSLRCKVGLLEKGTTAILKVRSRVWAETFTERA
YKQYVLECLARYSVEKMPYAILPRHAPSGHKKVVTPVVWNKPDIENSVPLWIIILAILAG
LLLLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggattggaacggttccgcgtaaagacgcagaggacggtggcccttctcccccgcgcg
ctgctctgcgccatcgtcggactgtcgctccctgcgcctccgcccgcctgcgaggcgttc
aacttggacgtggagagtccagctgtttacagcggacctcggggaagctacttcggatac
gccgttgacttttatttggccgattcttccagtgcgagcgtggtgataggagctcccaag
gccaacacgaggcaggtcaatgtgacggagggaggatcggtgttctactgtccgtggaac
ctcggccaatcggactgccacgccatcgagtttgatgcggaaggggatcgctctgtttca
ctcaacaacacagagcaccaggtcgatttcaagtcccaccagtggttcggcgccaccgtg
cgttcccacggtgacacgattctggcttgcgcacctctctactcttggcggaccgaaaaa
gacaccccccattctgacgcaacgggaacctgctacctctcaatccataatttcaccaaa
tttgtggagtatgctccctgccgcacagaaatcagtggtgagggtggacaagggtactgt
cagggaggattcagcgctgacttcacttcggatggcaaagtggtattgggaggaccaggc
agctacttctggcaaggtcaggtgatctctgcagctaaggaggacattatcaaagcgtac
tacccgggctacttcatgcagtctgtggagggccagatccagaccaaacaggtccattct
gcgtacgacgacagctatcaaggctactctgttgccgttggggaattcagtggtgatcag
gttgaagactttgtggccggcgttccaaaaggactcatgctttacggttcggtgtccatt
ctgaatgggacagatctgaagaccatgattaactacactggcgagcagatgggatcgtat
tttggctacgcggtggcaacgactgacatcaacagcgatgggatggctgacctgctggtg
ggagcgcccatgttcatggtccggggctcgggtggccgcctggaggagatgggccgggtc
tatgtttacctgcagcgtgggcccctgaacatggagctacgcctgcctcacatcacaggc
acccaggcgtttgggagattcggcagcaccattgcaccattgggagatctgaaccaggat
ggtttcaatgacgtggctattagctgtccgtttggaggggaggaccggcagggactggtc
tacatcttcaatggatactcgggaggactcagggaaaagccgtctcaggtgatcgcgggc
cagtgggccgccgggactattcctgccagcttcggattctccctcagaggtgccaaggac
ctggacatgaacggatacccagacctcatcgtcggtgcctttggtgttaataaagcagtt
ctctataggtcccgccccatcgtgaacgccagtgcctccctgacggtgtaccccaccatg
atcaaccccgaggagaagagctgcatggtcaccagtggaaacaccagcgttcccgtttcc
tgcgtcaacctgagtttctgcatatccgccgatgggaagcatctgccgggcgtcctagat
ttccaggtggaggtgcagctcgacagtcgtaagcacaagcagaaaggtgcggtgaagagg
gctctgttcctggactcccagcagcccttgctccggaggagcgtgagggttcgccatggc
gagcgcgtgtgcaaccacacaaagatctatctgagggacgagaaggagttcagggacaaa
ctctcctccattcacgtggccctgaacttcagcttggacccggaggccgccgccgactcc
cacggcctgcggcccatcctcaactaccagaccaccgacgtcattgagcagaaggcccag
attctgttggactgcggggaggacaatatctgcgttccggacttgaagctggcggttcac
ggggacaagagggaggtctacctgggtgacgacaactcgctgaccttgaccttcaacgcc
aagaacgagggggaggggggcgcgtacgaggcggagctgtacgtggtgctgccgcccgaa
gccgactacagcggaattgcgcgcaacaacgagagcctgacgcagctgacctgcagcttc
gagatggagaaccagactcggtacctcagctgcgacttgggcaacccgatgaagtccggt
accagtctgtgggcgggtctgcgcttcacggtgccgcggctgaaggacacgcacagaacc
gtccagttcgagatgcagattcgcagcaaaaacgagaacaactcccacagcgaggccgtg
ccctacaagctggaggtggtcgtccaggctgaagtcatcctgcaaggggtgtctcggcca
gacaaggtcttcttcccgcccgccaactggaaggtgaccaaaaactacggcgcggagcag
gacgtcgggccggcggtggagcacatctatgagctggtgaacaacgggcccagtcggatc
agccacaccctcctcgagctgcgctgccccctcagtgtgcagggccacaatctcctttac
cccctggagttctccaccgaggggcccgtcaactgcaccgccgacaggaacatgaaccac
ctgcacctcaaactccagcacacgtccacggagccgcccatcctggctctgaaggcccag
gagcaccgcgtcgagcggagggacgtccacaggaaccagctcgctcatctgaccaacctg
tcgtgctccaacgtggagtgctggtcgctgcggtgcaaagtgggcctgctggagaagggg
accaccgccatcctcaaagtgcgctcccgcgtctgggcggagaccttcaccgagagggcc
tataagcaatacgtgctggagtgcctggccagatacagtgtggagaagatgccttatgcc
atcctgcccagacatgcacccagtggacacaaaaaggtggtgaccccggtggtgtggaac
aagcccgacatcgagaactcggttcctctgtggatcatcatcttggccatcctggccggt
ctactgcttctggctttactcatctacgtcctgtacaagtttggcttcttcaagcgatcc
ctaccgtacggcaccgccatggagaaggcccagctaaaaccacaggctgcctctgaggcc
tag
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