Scophthalmus maximus (turbot): 118316267
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Entry
118316267 CDS
T09850
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03030
DNA replication
smau03410
Base excision repair
smau03420
Nucleotide excision repair
smau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118316267 (rfc2)
03410 Base excision repair
118316267 (rfc2)
03420 Nucleotide excision repair
118316267 (rfc2)
03430 Mismatch repair
118316267 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smau03032
]
118316267 (rfc2)
03036 Chromosome and associated proteins [BR:
smau03036
]
118316267 (rfc2)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118316267 (rfc2)
DNA replication proteins [BR:
smau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118316267 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
118316267 (rfc2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118316267 (rfc2)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118316267 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
118316267 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Viral_helicase1
RCF1-5-like_lid
AAA_24
AAA_11
Rad17
Mg_chelatase
AAA_19
RuvB_N
DEAD
nSTAND3
MipZ
AAA_18
AAA_assoc_2
AAA_5
ABC_tran
AAA_30
AAA_28
MeaB
AAA_25
NTPase_1
SLFN-g3_helicase
RNA_helicase
AAA_2
DNAX_ATPase_lid
PPR_1
MCM
bpMoxR
Motif
Other DBs
NCBI-GeneID:
118316267
NCBI-ProteinID:
XP_035499808
LinkDB
All DBs
Position
3:7022742..7027520
Genome browser
AA seq
388 aa
AA seq
DB search
MRRQFPVTRLPGRETSCCCSRADGAESGDSTAAVMDVEMSEPEREQKSTEKTDVEAGESS
SKSSGGAYELPWVEKYRPLKLNEIVGNEETVSRLGVFAREGNVPNIIIAGPPGTGKTTSI
LCLARTLLGASMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSM
TDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLTDGQILARLHEVV
EMERLAVSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSM
LGHCVEGKIDEAYKVVEQLWALGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMR
VAEGVNSLLQMAGLLGRLCSKTTAPPAS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgacagtttcctgtcacacggttgccagggagggaaacgtcctgctgctgttcg
cgggctgacggagcagagagcggagactcaacagccgccgtcatggacgtggagatgtcg
gagcccgagcgtgagcagaagtctacggagaagacggacgtggaggccggagagagttcg
tccaaaagctccggcggtgcctacgagctgccctgggtggagaaataccgaccgctgaag
ctgaacgagatcgtggggaacgaggagacggtgagccgcctgggggtgttcgcccgggaa
ggcaacgtccccaacatcatcatcgcaggtcctcccggcacaggaaagaccaccagcatc
ttgtgtttggcccggacgctgctgggagcctccatgaaggacgccgtgctggagctcaac
gcttcgaacgacaggggaatcgacgtggtgagaaataagatcaagatgtttgctcagcag
aaagtcacactgcccaaaggacgacacaagatcatcatcctggacgaagccgacagcatg
acggacggagcccagcaggccctcaggaggatcatggagatctactccaagacgactcgc
ttcgccctcgcctgcaacgcctcggacaagatcatcgagccgatccagtcgcgctgcgcg
gtgctgcgttattccaaactgacggacggacagatcctcgctcggctgcacgaggtggtg
gagatggagcgtctggccgtgtccgacgacgggctggaggctgtcatcttcaccgcccag
ggagacatgagacaggcgttgaacaacctgcagtcgaccaactccggcttcggctacatc
aacagcgagaacgtgttcaaggtgtgcgatgagccccacccgctgctggtgaaaagcatg
ctgggacactgcgtggaggggaagatcgacgaggcctacaaggtggtggagcagctgtgg
gcactgggctactccccggaggacatcatcggaaacatcttcagggtctgcaagacgttc
cagatggccgagtacctcaaactggagttcatcaaggagatcggttacactcacatgcga
gtggccgaaggcgtgaactccctcctacagatggccggactgctcgggcgactctgcagc
aagacgacagcaccccccgccagctga
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