Scophthalmus maximus (turbot): 118316290
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Entry
118316290 CDS
T09850
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118316290 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118316290 (l1cama)
04090 CD molecules [BR:
smau04090
]
118316290 (l1cama)
04091 Lectins [BR:
smau04091
]
118316290 (l1cama)
Cell adhesion molecules [BR:
smau04515
]
Immunoglobulin superfamily
L1 family
118316290 (l1cama)
CD molecules [BR:
smau04090
]
Proteins
118316290 (l1cama)
Lectins [BR:
smau04091
]
I-type lectins (Siglecs)
118316290 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Bravo_FIGEY
C2-set_2
Ig_C17orf99
C2-set_3
Sp38
Ig_5
Ig_VEGFR-1-like_5th
Ig_6
SusE
DUF4998
Motif
Other DBs
NCBI-GeneID:
118316290
NCBI-ProteinID:
XP_035499845
LinkDB
All DBs
Position
3:complement(12688484..12728494)
Genome browser
AA seq
1283 aa
AA seq
DB search
MPHTQQQQVGSRGQCSPRLRPLLLLLISLTAQLGQAAIHIPSNYHISDLKRPPVITMQPE
SVTVFSVEDLVMRCKASGNPPPIVRWTKDGLEFNQGSDPELKVSEVTASFPFYTLSNTMD
SLKQYQGKYVCYASNELGTAVSNEALLITDVPPTLQKEKKVHVKSEQGSSIVLKCNPPQS
SMEPIIHWMDWRLHHIQLSQRVMVGKDGNLYFAHLTTEDSRDDYTCNVQYLATRTILPKE
PITLTVTASNSVVRNKRPQMMRPAGSHSTYHALRGQTVELECIVQGLPTPDVTWLWKDGE
MSNNRTMKDMFDRRLRFSSISESDAGEYQCRANNSQGAITHTYTVIVEAGPYWTKEPVSQ
LYAPGETVRLDCQADGIPSPIISWTINGIPVSATDKDSRRILTTSGSLILNDVNFGDTAI
YQCQASNKHGTILTNTNVYVIELPPQILTEDGNKYTLTESQKALLECETFGSPQPKVIWE
RGSDSLLADPRVNLLTNGGLEISNVTHDDEGFYTCSVQNTNLSVNAELEVLNRTVILTPP
QALKVQAGNTAIFTCLALFDPKLGSPLIQWRKSNQKLFESQSDEKYTLEGPDLIIANVGP
DDEGVYTCQVITKLDMAEASGTLTLCDRPDPPVLLQITDPKRRAVTLSWTPGDDHNSPVL
EYVVEFEDQGSKERNWEEMKRVSGNTERASLPLWPNMSYRFRVIAVNDLGKSDPSKPSEI
HKTSPEAPENNPEDVRSESTDPDNLVITWEEMDERDFHGPEFRYRVLWRRVLGSGPTWHI
NYTTAPPFIVNDVGNFSAFEIKVQAVNEKGDGPEPDPVIGYPGEDVPLEAPMDVGVVLMN
STTIKVTWAAVDKKTVRGHLLGYKIYLTRTGSRGHHRGRRAKESESTMVVETGANEEKKV
ISDLRPYSHYTLAVTVFNSKGEGPASEMLSFKTNEGVPGPPTSLILDSPSETEMTLHWTL
PDQPNGVLLGYLLQYQRVVESDDSPMQVETIDDPTVTHLTLKSLDRQSHYRFYLRGRTAT
GDGEPIKKEGATTLDGAPPSNISLSVGENSVNLSWVAKKRHRNVNFQIHYLNKNDGSKWK
KTEMVNSSQSFYQLQGLTPGSLYHLRFTYSNITFWNVDVETEGTGVTEVQPSFATQGWFI
GVVSAIVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLE
EKRTASQPSLCEESRLCSEDNLDFNGGSAITTELHLDESLASQLSRPSEGPEALHGLPDN
SPLNPTTVSSATNGTPNSVTILD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacacgcagcaacagcaggttggcagtagggggcagtgctccccccgcctccgc
cccctcctcctcctcctcatctccctcactgcccagctcggccaagctgccatacacata
ccctccaactaccacataagtgatctgaagaggcctccagtgatcacgatgcagccggag
tctgtcaccgtcttcagcgtggaggacctcgtcatgagatgcaaagcctccggaaaccct
ccacccattgtccgatggacaaaggacggacttgagttcaaccaaggcagcgacccggag
ctgaaggtttctgaggtcactgcctcgttcccgttctacacgctcagtaatactatggac
agcctgaagcagtaccagggcaaatatgtctgctacgcatccaatgagctggggactgcc
gtgtctaatgaggccttactcattactgatgttcctccaaccctgcagaaagaaaaaaag
gttcatgtgaagtctgaacagggaagcagtattgttctgaagtgtaatcccccacagagc
tctatggagcctatcattcactggatggactggaggctgcaccatatccagcttagtcag
cgagtgatggttgggaaggatggaaacctgtactttgcccatttgacaactgaggacagc
agggacgactacacctgcaatgttcagtatctggcgacccgcaccattctaccaaaggag
cccatcactctgaccgtcaccgcttccaactcagtagtgcggaacaagcgaccccagatg
atgagacctgctggaagccacagcacttaccacgccctcaggggccagaccgttgagctt
gagtgcatcgtccaaggccttcctactcctgatgtgacgtggctgtggaaggatggtgag
atgtccaacaaccgaactatgaaagacatgtttgaccgccgcctgcgcttcagtagtatc
tcagagagtgatgcgggagagtaccagtgtagagcaaacaactcccaaggagcgatcaca
cacacttacactgtgattgtggaagctggtccctactggactaaagagccagtcagtcag
ttatatgccccaggtgagactgtcaggctagactgccaggcggacggcatcccctctcct
atcatcagctggactatcaatgggatcccggtatcagcaaccgataaggactcaagacgt
attctgacaaccagcggatctctaatcctaaatgatgtcaacttcggtgacactgccata
taccagtgtcaggcctccaacaagcatggaaccatccttacaaacaccaacgtttatgtc
attgagctgcctccacagatacttactgaagacgggaataagtacacattaacagagagc
caaaaggctttgctggagtgtgagacctttggttctcctcaacctaaagtcatatgggag
agaggcagcgactcccttctggcggatcccagagtgaacctactcacgaatggggggctc
gagatctctaacgtcacacacgacgatgagggcttctacacctgttctgtacagaacacc
aatttgtcagtcaatgcagagctggaagtgctcaacaggacagtgatcctgacaccaccg
caggctctgaaggtgcaggctggaaacacagcaatcttcacttgcctggccctatttgac
cccaaactcggctctccgttaattcagtggcgaaaaagcaatcagaagctgtttgagtcc
caaagtgacgaaaaatacacattggaaggaccggacctaataattgctaatgtgggacca
gatgatgagggtgtgtacacctgtcaggtcatcactaagcttgacatggctgaagccagt
ggcaccctcactttgtgtgatcgtccagacccacctgttcttcttcagatcactgatccc
aagcgtcgtgcagtcacccttagctggactcccggagacgaccataacagccctgtgcta
gagtatgtggttgagtttgaggaccaaggatcgaaggagaggaattgggaagagatgaag
agagtaagtggaaacacagagcgtgcaagcctccctttgtggcccaacatgtcctaccgt
ttccgggtcattgctgtcaatgatttgggtaagagcgaccccagcaagccatctgaaata
cacaagacatctcctgaagctccagaaaacaaccctgaagatgtaagaagtgagtccaca
gacccggacaatctggtcatcacctgggaggaaatggacgaacgcgacttccatggacct
gaattcaggtacagggtgctgtggaggcgcgtgctgggcagcgggcccacctggcacatc
aactacacaacggcaccgccattcattgtcaatgatgttggaaacttctctgcctttgag
ataaaagttcaggctgtcaatgagaaaggagatggacctgaaccagacccagtcattggt
tacccaggagaagacgtcccattggaggctccaatggatgtgggcgttgtgctaatgaac
agcactaccatcaaagtgacctgggcagcagtagacaaaaagacggtcagaggacacctg
ctgggatacaagatctacttgaccaggactggctctaggggccaccacagaggccggagg
gccaaggagtcagaaagcaccatggtggtggagactggggccaacgaggagaagaaggtg
atcagtgatctcagaccgtactcccactacaccctggcagtcacggtattcaacagcaag
ggagagggacctgcctcggagatgctgtccttcaagactaatgagggagttcctggtcct
cccacgtccctgattttggacagtccttcagagacagaaatgaccctccactggacactt
ccagaccagcccaacggagtcctccttggatatctactgcaataccaacgggttgtggag
agtgacgacagccccatgcaagtggagacaatagacgatcccacggtcacccacctcacc
ctgaagagcctggatcgccagagccactaccgcttctacctgagggggcgcactgctact
ggggatggagagcccattaagaaggagggcgccaccacgctggatggagcacctccttcc
aacatcagcctgtctgtgggggaaaactcagttaacttaagctgggtagccaaaaagaga
cacaggaatgttaatttccagatccactacctcaacaagaacgatggcagtaaatggaag
aagacagaaatggtgaattcctctcagtctttctaccagctccagggcctgacacctggc
tctctgtatcatctacgcttcacctacagcaacatcaccttctggaacgttgacgttgag
acagaaggaacaggagtgacggaggtgcagccaagcttcgcaacgcaaggctggtttatc
ggcgttgtgagcgccatcgtgctgctgctgctgatactgctcatcctctgcttcatcaag
agaagtaaagggggaaagtactcagtgaaagataaagaagagggcccaatggattcggag
gcacggcctatgaaggatgagacttttggagagtacagatctctagaaagcgacctggag
gagaagcgtacggccagccagccgtccctgtgcgaggagagcaggctgtgcagtgaggat
aaccttgacttcaacggcggcagcgccataaccacggagctccacctggatgagtctctg
gccagccagctcagtcggcccagcgaaggtccggaggcgcttcatggcctgccagacaac
tccccgctcaaccccaccaccgtctcctcagccaccaatggcacgcccaactcagtaacc
atcctcgattaa
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integrated database retrieval system
