Scophthalmus maximus (turbot): 118316346
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Entry
118316346 CDS
T09850
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04120
Ubiquitin mediated proteolysis
smau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118316346 (ube4b)
04120 Ubiquitin mediated proteolysis
118316346 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118316346 (ube4b)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118316346 (ube4b)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
U-box type E3
118316346 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
118316346
NCBI-ProteinID:
XP_035499965
LinkDB
All DBs
Position
3:14358114..14376801
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AA seq
1383 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLHGPSGAAPQPLPPAA
SQPLGLNVHTGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVDDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDAYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAAKSPDHRLTLVHPSSQGGSPMGPGAGSFGASSLSSLYGCGSPHPMALDAAKRTSP
SLPPPTPPSEPSLPSTPSTPQFIVPPSPPITATPRHSLNPPSAPLPISQRYRPYSVTSSW
GAPSPSSWGHRGVSFFEPSPSPAGPSVPPNTPVPVPPPSPQSLSLSSPRARILPSSTPPP
MVPPSPRSITRQSAFGSRIPPSSPLSSLFFALSDMSQDSSDEESEEEEDFAQVQFGSSVG
ACGGGMSCDSASDRFTIETCKETEMLNYLIERFDSVGMEERKAPKVMCSQPNVSQLLSNI
RSQCISHVALVLQGTLTQPRSPLQQSLLVPYMLCRNLPYGFIQELARITHQEEEVFRQIF
IPILHGLAVAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCSLATLLPLWCPKPVSPG
SGREIQRLSYLGAFFSLSVFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDL
FKVLHNILLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMK
IKLETVDPYYIFHPRCRLVVSSEETRLKATMEELKIWLTGLHEDPTKFSEPKFPTECFFL
TLHTHHLSILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQL
KKLVRAKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAAL
PEFYIEDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFV
TNPAVQPRTQRFSEMMENHPLSIKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIF
KSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQ
WDQLPREQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAM
LNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSR
ELFEEVISKMRKAGIKSSIAIEKFKLLLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTL
MTDPVILPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGG
RPV
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgagcgccgatgagattcgcagaaggcgactggcgcggttggcaggggga
cagacgtcacagcccagcacccccctcagcacacccctgacgtccccacagagagagact
ccacctggccccctccacggaccctcaggtgccgcaccccagcccctgccaccagctgcc
tcccaaccgttggggttgaatgtccacactggtacccctgccacatcccctatgggcacc
tctggggtggcatatggcagtcagagcagcgagggtgtcagctccctctccagctccccc
tccaacagccttgagactcagtcccagagtttgtcccgatcgcagagcatggacattgac
actgcctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggacgacagtgatcgcagggagaagaggaacttgactgaaaaggaaacctctgca
aactcggatgtctctgaagaacaggctctgcagctcatttgcaagatcctccgcgtatcg
tggaaggaacaggacagagatgtcatctttctcccgtccctggctgcagagttccaccaa
aatcctaaagatgcgtactctgacttcaaagacctgatcggccagatcctgatggaagtc
ttaatgatgtccacccagtcccgtgtccacaatccgtttgccagcttgaccgccacctct
cagccaattgcagcagccaaatctcctgaccaccgtctgacgctggtgcatccctccagc
caaggcggcagtcccatgggccccggtgcagggtcctttggagccagctctctgtcaagt
ctgtatgggtgtggtagtcctcacccaatggctttggatgcagccaagaggacttctcca
tctctcccccctcctactcctccctctgaaccctctctaccctctactccttctacacca
caattcattgttccccccagcccacctatcactgctacaccaagacactccctcaaccct
ccatctgcccctttgcccatctcccaacgctatcgcccctactcggtcacctcctcctgg
ggggctccttccccatctagctggggacacagaggagtcagtttctttgaaccctctcct
agtccagcagggccttctgttcctcccaacaccccagttcctgtgccaccacccagcccc
cagtccctctccttgagctcccctcgggctcgcatcctgccctcctccacaccccctccc
atggttcccccttctcccagatcaatcactcgacaaagtgcgtttggttccaggatccca
ccatctagccccttgtcgtccctgttcttcgccctatctgacatgtctcaggacagcagt
gatgaagagtctgaggaggaggaggattttgcgcaggttcagtttgggtccagtgttggt
gcatgtggaggggggatgtcctgcgattcagccagcgaccgcttcaccattgaaacatgc
aaagagacggagatgctgaactacctcattgagcgttttgacagtgttggcatggaggag
aggaaagctcccaaggtaatgtgcagccaaccaaatgtcagccagcttctcagtaacatt
cgctctcagtgtatttctcatgtcgccctggtcctgcaagggaccttgacccagcctcga
agccctctccagcagtcgttgctggttccttatatgctgtgtcggaaccttccttacggc
tttattcaggagctggcacgcattacccaccaggaggaagaagtgttcagacagatcttc
attcctatcctccacgggctggctgttgcggttaaagaatgttcttttgacagtgacaac
tttaaattccccctcatggcattagctgaactttgtgaaattaagtttggaaagactcac
ccagtgtgcagtttggcaacgttgctgcctctatggtgtcccaaacctgtaagccctggt
tctggcagagagatccagagactgtcctacctgggagccttcttcagcctctcagtgttt
gctgaggatgataccaaagtaggagacaagtatttctcgggtccagccatcaccatggag
aacacacgagttgtcagtcaatcattgcagcactacctggagtcggcaaggggtgacctg
ttcaaagttctccataacatcctactaaatggagagacacgcgagttagctcttaactac
atggcagctttagtcaactataatgtgaagaaagcccagatgcagaccgatgacaagctg
gtttctacagacggcttcatgctgaacttcttatgggtgctgcaacagctgagcatgaag
atcaagctggagacggtggatccttattacattttccatccacgctgtcgccttgttgtc
agctcagaggaaacacgtctaaaggccactatggaggagctgaagatctggctcactgga
ttgcacgaagaccccaccaagttctcagaacctaagttccccaccgagtgtttcttcttg
acactgcacacccaccatttgtccatcctgcctggctgcaggcgctacatccgcaggttg
cgagccattcgtgaactgaacaggactgtagaggagctgaagaacagtgaaagccagtgg
aaagattctcccctggccagtcgacacagagagatgctcaagcgctgcaaaacccagctc
aagaaactggtgcgagccaaagcttgtgctgacgtgggccttctggatgagaacctgctc
cgcagatgtctgcagttctacagcacagtcattcagctcattctccgcatggtggaccct
gcctatcccaacattaccctgccactgaaccctgagattcccaaaagctttgctgctctc
cctgagttctacattgaagatgtggccgagtttctgctttttgtcgtgcagtattctccc
caggttttatatgagccgtgtgtccaggacattgtcaccttcttggtggtgtttatctgc
agccagaactacatcaggaacccctaccttatcgccaagttggtggaggtgctgtttgtc
accaaccctgctgtacagcctcgtactcagcgattttccgaaatgatggagaaccaccca
ttgtccatcaaacagctggtccccgccctcatgaagttctacactgatgttgagcatacc
ggcgccaccagcgagttctatgataagttcactatacggtaccatatcagcactatcttc
aagagtctctggcagaacattgcccaccatggcaccttcatggaagagttcaactctggc
aagcagtttgtgcgctacatcaacatgctgatcaatgacaccaccttcttgttagacgag
agcctcgagtccctgaagcgtatccacgaagttcaagaagagatgaagaataaggagcaa
tgggatcagttaccgagggagcagcagcagagccgccagtcccagctgactcaggacgag
cgtgtgtctcgctcctacctggctctggccacagagacagtcgaaatgttccacatcctc
accaagcaggtccagaagcctttcctcaggcctgagctggggccgcgtttagctgccatg
ctaaactttaatctccagcagctctgtgggccaaagtgtcgggacctgaaggtggagaac
cctgagaagtatggctttgagcccaagaagctcttagaccagctgactgacatctacctg
cagctcgactgtgcccgctttgctaaagcaattgcagacgaccagcggtcgtacagtcgc
gagctgtttgaagaggtgatctcaaagatgaggaaggctggaatcaagtcctccatcgcc
attgaaaaattcaagctactgttggagaaggtggaggaaatagtcgccaggaactcccag
tctgaaatggactacagtgatgcaccagatgagttcaaagaccctctgatggacacactg
atgactgaccctgtgatactaccctctgggaacatcatggaccgatccatcattttacgt
cacctgctcaactccccaacggatcccttcaataggcagccactcacagagagcatgttg
gagtcagtccccgagctgaaagagaggatccacgcctggatgagagagaaacaaggggga
cggcctgtctaa
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integrated database retrieval system
