Scophthalmus maximus (turbot): 118316617
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Entry
118316617 CDS
T09850
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118316617
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118316617
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118316617
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118316617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Sec7-like_HUS
HEAT_GCN1
Adaptin_N
HEAT_DAAF5
MMS19_C
Paxt-1_C
ParcG
TAN
HEAT_ULK4
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
118316617
NCBI-ProteinID:
XP_035500509
LinkDB
All DBs
Position
1:31188673..31214294
Genome browser
AA seq
1612 aa
AA seq
DB search
MEEEDEEVGVSMEYLLEQALQKDLAKRLQVGQEIVELVLDPNRSPELEQDQGSLDRMVDA
VASSWVNSSNFKVVLLGMDVLSALVTRLQDKFRTQVGTVLPSLIDRLGDAKDQVRDQDQV
LLLKIMDQAANPQFVWERMTSGFKHKNNRTREGICLCLISTLNVFGSQSLTLSKIVPHIC
NLLGDPTSQVRDGAMSCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMV
LSPVSDKNFEDDDSVDAGRSSSSSKGASVSGKKTVSMGSFRRPASSSASSSRSAGRDASS
SGAGAVDEDDFIQAFEDVPTVQIYSNREVDEAMTKIRDVLSDDKRDWELRVAALKKVRSL
ILAGATEFDGFPQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSQVLGGRFDHAAEAVM
PALLNLVPNSAKVMATSGIAVIRLILRHTHYPRLIPIISSNCTAKSVAVRRRSFEFMELL
LQEWQTSSLERHCTVVMETIKKGIHDADAEARSVARRCYWGFHGHFSREAEHLFQGLESS
YQKALLAHLKSGDCVMSLPASDRSSSSSQESLNRPLGVKSSAGSTNRSKPGHTSRTPAAA
SSPGSLQRSRSDVDVNAAATATARTRLTAAPSIGSPFSSASALPPGSYASLGRVRTRRTS
SGNSPCVTDSRGRSRGKVVSQSQPGSRSGSPGRLLSSTYVRIPKPTMGAAAANSLSRPRG
HRSQGCSRETSPTRSGLARSRIPRPSMSQGCSRETSRESSRDTSPARGFSPLATRRHSRS
TSALSSAECCSDRLAHQARISASVNAMKILDTGTEVEAAVADALLLGDSRNKRRPVRRRF
ESPGMYSDDDANSDASSACSERSYSSRNGGAGTHYLRQMEDVAEVLNHCASANWSERKEG
LLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIVLHRDDLQDW
LFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYEQQFNILMRFIVDQTQTPNLKVK
VAILRYIEALARQMDPSDFVNSSETRLAVSRVITWTTEPKSSDVRKTLHNWAGEDFSGRP
STVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTKLLHNHLRN
ASANSGIVMASPCNSMGRTPPRQPGSRSSPMTSPTNCSHGGLSPSRLWGWSADGLSKFPP
PPFPSSPLPPPTSHSSLKSLRRAYSPSMMEYDSENLNSEEIYSSLRGVTEAIQNFSFRSQ
EDLMEPLRRDGKRDATLGVGASPDSDLLEGGRTALDNKTSLLNTPSPRSFAGPRFRDYNP
YNYTDGVSSLDKAALKEALYEDGVEQLRDGRQDCVENKIQNPKTFPGGATEQLQLVGELL
KELSQGQAGERGPEERRGTLLELLKVVREDGLLVWEEHFKTLLLLLLETLGDKDHTIRAL
ALRVLKEILKNEPLRFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTMASSIQPEQCIK
VLCPIVQTADYPVNLAAIKMQTRAIERVAKEPLHQLLPDVIPGLLQGYDNTESSVRKASV
FCLVAVYSVMGEELKPYLAQLTGSKMKLLNLYIKRAQTSTSNSSSSSDISSY
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggacgaggaggtgggggtcagcatggagtacctgctggagcaggcgctg
cagaaggacctggccaagaggctccaggtgggacaggagatcgtagagctggtcctggac
ccgaacaggtcccccgagctggagcaggaccagggctcgctggacaggatggtggacgcg
gtggcgagctcctgggtgaactccagcaacttcaaggtggtgctgctggggatggacgtc
ctttcggctctggtcactcgactgcaggacaaattcaggacgcaggttggaaccgttctg
ccgagtctgatcgaccgactcggcgatgccaaggaccaagtcagggaccaggaccaggtt
cttctgctgaagatcatggaccaggctgccaacccacagtttgtgtgggagcgaatgacg
agcggcttcaaacacaagaacaaccggaccagagagggaatctgcctctgcctcatctcc
accttaaacgtgtttggatctcagagtctgacgctcagtaaaatagttcctcacatctgt
aacctgctcggagatcccaccagtcaggtgcgtgacggcgccatgtcgtgcctggtggag
atctaccgccacgtgggagagcgagtgcgaatggacctggggaagaaaggtctgcctcag
tcacgactcaacgtcattttcagcaagttcgacgaggttcagcggtcggggaacatggtg
ctgtcaccggtgtcagacaagaacttcgaggatgatgactctgtggacgccggacgctcc
tcgtcctcgtccaaaggcgcctcggtgtccgggaagaagacggtgagcatgggttcgttc
cgacgccccgcctccagctccgcctccagctccaggtctgcagggcgggacgcctcaagc
tcaggcgctggagccgtggacgaggacgacttcatccaggcctttgaggacgttcccacg
gtgcagatctactccaacagggaggtggacgaggccatgacgaagatccgagacgtgctg
tcggacgacaagcgggactgggagctccgggtggcggctctgaaaaaggtgcgttcgctg
atcctggccggagcgacggagttcgatggcttcccgcagcagttgcggctcatggaggcg
gcgttcaagctgtcggccaaagacttgcgctcgcaggtggtgagggaggcctgcatcact
ctgggccacctgtcgcaggtgctcggcgggcggttcgaccacgcggcggaggccgtcatg
ccagcgctcctcaacctggtgcccaacagcgccaaagtcatggccacgtccggcatcgct
gtcatccgcctcatcctgcgacacacacattatcctcgtctgatcccgatcatcagcagc
aactgtacggcaaagtctgtggctgtacgcagacgcagctttgagttcatggagctgctg
ctgcaggagtggcagaccagttccctggagagacactgtaccgttgtcatggagaccata
aagaaagggatccacgatgccgacgccgaggctcgatccgtggccagaaggtgttactgg
ggtttccacggtcacttcagccgggaggcggagcatctgtttcagggcctggagtcgtcc
tatcagaaggctctgcttgctcacctgaagagcggcgactgtgtgatgtcactgcccgcc
tccgaccgctcgtcctcctcatctcaggagagcctcaatcgacctctgggtgtaaaaagt
tcagcaggaagcacaaacagatctaaacccggccacacctccaggactcctgccgccgcc
tcctctccgggatccctgcagcgctctcgcagcgacgtggacgtcaacgccgccgccacg
gccacggcccgcaccaggctgaccgccgctccgtccattggttcgcccttcagctcggcc
tcagcacttccccccgggtcctacgcttccctgggtcgagtgcgaacgcggaggacgagt
tcaggaaacagtccgtgtgtgacagacagccgcggtcgcagccgagggaaggtcgtctcc
cagtctcagcccggcagtcgctcaggttctccgggtcgactgctgagctccacctacgtc
aggatcccgaagccgacgatgggcgccgccgccgccaacagcctgagccgaccacgaggt
caccgcagccagggctgcagccgggagaccagccccaccagatctggcctggcccggagt
cgaatcccgcggccgagcatgagtcagggctgcagccgcgaaaccagtcgcgagagcagc
cgcgacaccagccctgccaggggtttctcccccctggcgactcgccgtcactcccgctcc
accagcgccctgtcctccgcagagtgctgctcagaccgactcgcccatcaggctcggatc
tcggcctccgtcaatgccatgaagatcctggacaccggcaccgaggtggaggctgcggtc
gcagatgctctgctcttaggagactcgaggaacaagcggaggcccgtgcggcggcgcttc
gagtccccgggcatgtactcggacgacgacgccaacagcgacgcctccagcgcctgctcg
gagcgctcatacagttcacgcaacggcggcgcagggacgcactacctgcgccagatggag
gacgtggcagaggtgctgaaccactgcgccagcgctaactggtccgagaggaaggagggg
ctgctgggcctgcagaacctgctgaagagccagaggacgctcagccgagtggagctgaag
agactgtgtgagatcttcaccaggatgttcgcagaccctcacagcaaaagagtgttcagc
atgttcctggagactctggtggacttcatcgtgctgcaccgggacgacctgcaggactgg
ctcttcgtgctgctcacccagctgctgaagaagatgggtgccgacctcctgggctccgtc
caggccaaagtccagaaggccctggatgtcaccagggactcgttcccgtacgagcagcag
ttcaacatcctgatgcgtttcatcgtggaccagacgcagacccccaacctgaaggtgaag
gtcgccatcctgcgctacatcgaggccctggctcgccagatggacccgtccgacttcgtc
aactcaagtgagacgcgcctcgccgtgtcgcgcgtcatcacctggacgaccgagcccaag
agctctgatgtccgcaagaccctccacaactgggcaggggaggatttctcaggccgaccc
agcaccgtggcctctctgcctggggagggcaacctggaggagaggtgcaagcaggcggcc
caggtggtgctgatcgccctgttcgagttgaacactccggagttcaccatgctgctggga
gcgctgcccaaaaccttccaggacgggacgaccaagctgctgcacaaccacctgaggaac
gccagcgccaacagcggcatcgtcatggcgtctccatgtaactcgatgggtcggacacct
cctcgacaaccaggcagccgcagcagcccgatgacatcacccaccaactgctcccacgga
ggactgtcccccagtcggctgtggggttggagcgcagatggactctccaagttccctcct
ccacccttcccctcttcccctcttcctccgcccacttctcactcctccctcaagtccctg
cggcgagcttactcacccagcatgatggagtacgacagcgagaacctgaactcggaggag
atctacagctcgctgcgcggcgtcacagaggccattcagaacttcagcttccgcagccaa
gaggacctgatggagccgctgaggcgcgatggcaaaagggacgccacgctgggagtcgga
gcgtcgccagactccgacctgctggagggcggacgcacggcgctggacaacaagacgtcg
ctgctgaacactccctcgccacgatccttcgccggcccgcgcttccgcgactacaacccc
tacaactacacggacggcgtcagctcgctggacaaagccgccctgaaggaggcgctgtac
gaggacggcgtggagcagctgcgagatggccggcaggactgtgtggagaacaagatccag
aatcctaaaaccttcccggggggcgccacagagcagctgcagctggtgggggagctgctg
aaagagctgtcccagggccaggcgggggagcggggccccgaggagcggcgggggaccctg
ctggagctgttgaaggtggtgcgggaggacggcctgctggtgtgggaggagcacttcaag
acgctgctgctgctgctgctggagacgctcggagacaaagaccacacgatccgagcgctg
gcgctgcgagtcctgaaggagatcctgaagaacgagccgctccgcttcaagaactacgcc
gagctcaccatcatgaagacgctggaggctcacaaggactcgcacaaggaggtggtgcgg
gcggcggaggaggcggcctccaccatggcgagctccatccagccggagcagtgcatcaag
gtgctctgtcccatcgtgcagacggctgactaccccgtcaacctggccgccatcaagatg
cagaccagggccatcgagcgcgtcgctaaggagccgctgcaccagctgctgccggacgtc
atcccgggactcctgcagggctacgacaacacggagagcagcgtgaggaaggcgagcgtc
ttctgcctcgtggccgtttactccgtgatgggcgaggagctgaagccgtacctggcccag
ctgaccggcagcaagatgaagcttctgaacctttacatcaaacgagctcagacatcgacc
agcaacagtagcagttcttccgacatctcgtcctactga
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integrated database retrieval system
