Scophthalmus maximus (turbot): 118316748
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Entry
118316748 CDS
T09850
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118316748 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118316748 (mbd4)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118316748 (mbd4)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
118316748 (mbd4)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
118316748 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
118316748
NCBI-ProteinID:
XP_035500786
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All DBs
Position
3:7803880..7811842
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AA seq
655 aa
AA seq
DB search
MEVKSHCNGFDTTEGAANKKINQSQCISSQPTASVKLQHHDTEEAPPPLTDRSENGDLSD
RSLTGSSSTHDISRLLPSQPASALWKQKGTDKSTVSPGPVCTPPHPPPPPPPPQSTTCNR
YSCSLQHHHHHHQSTNQKHLPSTKSHSSLRMDAAHLKEVAGDGCHSHHSFSRVRNNSTPL
NMYPAGCGIQLEASRDVHNPSHNDGDDSCHISKMPPGWIREVRQRRAGKTAGKLDVYITS
PQGQKFRSRASLDAFLQKNGDGNLDMNLFEFTASKDNVITIPQILPTQRKLGRRKKQKET
TQDATDILDPPPNKSKRSNEEENVKSSNDTNYTNTNILPEVCRDKTDETVEVCVQAVPSA
VVDVLQRSPQRAIGLREKLLRLASPSKQKNTSCAQEDERADSEPSVPTLNVEPPTESEEE
EEGEDGRGGGGGEIQIHSEGVDKPNSELETDADGHQDVEEEVLSPDITVSCTPVRDSQNN
SKSSTDKRKTSPYFSGKLLKDGLSPPRRKAFKKWTPPRSPFNLVQETLFHHPWKLLVATI
FLNKTTGKMAIPVLWQFFERYPSAEVTREADWKSMSELMKPLGLYELRAKTLVRFSDEYL
TKQWRYPIELHGIGKYGNDSFRIFCVGEWKQVTPEDHMLNKYHAWLWENHEALGM
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgaagtcacactgcaacggttttgacaccactgagggtgcagccaataagaaa
ataaaccaatcacaatgcatctccagtcagccgacagccagtgtgaagctccaacatcac
gacacagaggaggctccgccccctctcactgataggtcagaaaacggtgacctcagtgat
cgctctttgacaggcagctcctccactcatgacatctctcggctgcttccctcccagcct
gcctctgctctctggaaacagaaaggtacggacaagtctacagtgtccccaggtcctgtc
tgtactcctcctcatcctcctccacctcctcctcctcctcaatcaaccacctgtaacaga
tatagctgcagccttcaacatcatcatcatcatcatcagagcaccaatcagaagcatctc
ccctccactaaaagccacagctccctcaggatggatgctgcccacctcaaggaggttgct
ggagatggatgtcactctcatcactccttcagtcgggtcagaaacaacagcacacctctc
aacatgtatcccgctggctgtggcatccagctggaggccagtcgagacgtccataacccg
agtcacaatgacggagatgattcgtgccacatctccaagatgcccccaggctggatccga
gaggtgaggcagaggagagcaggcaagacagcaggcaaactggatgtctacattacaagt
ccccaagggcagaagttccggtcaagggcatcgctggacgctttcctccaaaaaaatgga
gacggcaacttggacatgaacctctttgaattcactgcatccaaggataatgtcatcaca
ataccacaaatactccccacccagaggaaactggggagaagaaaaaaacagaaggagaca
actcaagatgcaacagatattctggatccacctccaaataaatctaaaaggagtaatgaa
gaggaaaatgtcaagagttccaatgacactaactatactaatactaacattttaccagaa
gtgtgtagagacaaaactgacgagacagtggaggtctgcgtacaagctgtaccttcagca
gtagtagatgttctgcagaggagccctcagagagccatcggcctgagagaaaagctgctc
cgactagcttcgcctagcaaacagaaaaacacttcttgtgctcaggaggacgaacgggca
gactcggagccttctgtcccaactctgaatgtcgaacctcccactgagagcgaggaggag
gaggagggtgaagatggacgaggaggaggtggaggtgagatacagattcacagcgaaggc
gttgacaagcctaattctgaactggagactgatgctgatggtcatcaggatgtggaagag
gaggtgttgtcacctgacatcactgtcagctgtacgccagtgagagattcccagaacaac
tccaagagctcgacagacaagcgaaaaacaagcccttacttcagcgggaaactcttaaaa
gatggtctcagccctcccaggagaaaggccttcaagaagtggacaccccctcgttctcca
ttcaaccttgtacaggaaacccttttccaccatccctggaagctcctggttgccaccatc
tttctgaacaagaccactggcaaaatggccattccggtgctgtggcagttctttgagcgt
tacccatctgcagaagtgacccgggaggccgactggaagtccatgtctgaacttatgaag
ccacttggcctctatgagctcagagccaaaacactcgtccgcttctcagatgaatatcta
actaaacagtggcgttaccccatcgagctgcatggtattgggaagtacggcaacgactcc
tttaggatcttctgtgtgggagagtggaaacaggtgacacctgaagatcacatgttaaac
aaatatcacgcttggctgtgggagaaccatgaagctctcggaatgtga
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