KEGG   Scophthalmus maximus (turbot): 118316777
Entry
118316777         CDS       T09850                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04145  Phagosome
smau04210  Apoptosis
smau04517  IgSF CAM signaling
smau04530  Tight junction
smau04540  Gap junction
smau04814  Motor proteins
smau05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118316777
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118316777
  09143 Cell growth and death
   04210 Apoptosis
    118316777
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118316777
   04540 Gap junction
    118316777
  09142 Cell motility
   04814 Motor proteins
    118316777
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118316777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smau03019]
    118316777
   03036 Chromosome and associated proteins [BR:smau03036]
    118316777
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smau04812]
    118316777
   04147 Exosome [BR:smau04147]
    118316777
Messenger RNA biogenesis [BR:smau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118316777
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     118316777
Cytoskeleton proteins [BR:smau04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    118316777
Exosome [BR:smau04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118316777
  Exosomal proteins of other body fluids (saliva and urine)
   118316777
  Exosomal proteins of colorectal cancer cells
   118316777
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 118316777
NCBI-ProteinID: XP_035500852
LinkDB
Position
3:4229313..4232246
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgagagtgtatctccatccacgtgggccaggcgggcgtccagattggcaacgcctgc
tgggagctttactgcctggaacacgggatccagccggacggacagatgcccagcgacaaa
gccatcggcggaggagacgactccttcaacaccttcttcagcgagaccggagcgggaaag
cacgtccccagggccgtttttgtcgacctggagccgaccgtcatcgatgaggtgcgcact
ggaacctaccgccagctgttccaccctgagcagctgatcaccggtaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggcaaggagatcatcgacctggtgctggac
aggatccgcaaactggccgaccagtgcactggccttcagggcttcctggttttccacagc
ttcggaggtggcaccggctctggattcacctccctgctgatggagcgtctgtctgtggac
tatggcaagaagtccaagctggagttctccatctacccggctccccaggtgtccaccgct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactccgactgt
gccttcatggtggataacgaagccatctacgatatctgccgcaggaacctggatattgag
cgtcccacctacaccaacctgaacaggttgataagccagatcgtgtcctccatcactgcc
tccctccgattcgatggcgccctcaatgtggatctgacagagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctcagctgagaag
gcgtaccacgagcagctctcggtgtctgagatcacaaacgcctgcttcgagccggccaat
cagatggtgaaatgcgaccctcgccacggtaaatacatggcctgctgcctgctgtaccgt
ggtgacgtggtgcccaaagacgtcaacgccgccatcgccaccatcaaaaccaagcgctcc
atccagttcgtggactggtgtcccactggcttcaaggtggggatcaactaccagccgccc
actgtcgttcctggcggcgacctggccaaggtccagagggccgtgtgcatgctgagcaac
accaccgccatcgcagaggcctgggcgcggctcgaccacaagtttgacctgatgtacgcc
aagcgcgccttcgttcactggtacgtgggcgagggcatggaggagggcgagttctccgag
gccagggaggacatggcggccctggagaaggactacgaggaggtcggagtcgactccatc
gagggtgagggcgaggaggaaggagaggagtattga

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