Scophthalmus maximus (turbot): 118316798
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Entry
118316798 CDS
T09850
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smau03037
]
118316798 (nphp4)
Cilium and associated proteins [BR:
smau03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
118316798 (nphp4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
118316798
NCBI-ProteinID:
XP_047186891
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Position
3:complement(18089089..18231250)
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AA seq
1456 aa
AA seq
DB search
MVRAGDVSTAADGWREAFDGSRLVPAPSPAVRRAAESHLAGSQGFQLRLGRLAAAPLPQS
PEMPEVERDLTHQLRVTLFDQNHRHFFGKTWKSPAHRMTNNKICFNEVLYFHTSVRLPST
VVVLELVLLSPRPDGSQQALGRGFTVLELFTSRPEAQAADGDRRLDLHHGSPRSLLHPLL
KDSVDYSSLLKTIDGAHLDCVVKSHPAMVPMMHLLPENVLVSGDENIPGLAASPTGDALL
RPQLLKMLPFTLNRLTISLQPSLETFESQLLQLINADCHNTKQPGPEGALSTVAIQERRL
HVGVHNGWCFLDKPQVVVLELLASGARGRADSTSKRSTSDSSAPSSLPQVLGLRSSLELK
VTNHQALAIVFQLEYVFSAPIGRETMLSATSSSRAAFLQCLRWGIFCPFQQPADWKGEEI
QLVLRGGAKPNPYGVMVYGTEMPAKAQSSVPLSAPGTTQVNDVITFRLSSGLERKASSPK
ASLRTRQEDVQHERRLPSSPLRVQKRLPAASPPESPQGPGLSLSQLAAPCRYPTISHSSS
ALPWQQSFPSPLHPSLLASAHQLSHVAFSAVSNIAHLEMDLQRDGDVSPSAQNEGAQLEE
LPFTPVHAPVITLGMNVPSSSSVSSRSSLAHLYSAGFPQIVDCGGQVADVLDPTEPVHFD
PQREETDLLQGNLPVFQFLAFTRIPIAGAGPDWPRDVYFTFQFYRFPPVTSQQLKLLTSN
RVQHKTSDPLPCVLAPAGKDGTVNPGSPGLQVQFRVDDAFLRPGEKRWFLRYLALHTMHI
DIWDSESLLLIGSTAIELKYMLRQGKTAVQALHEVEVLTTDYVGEDALLTSAGLGQRSAS
GPMTVHTIVRGRLHVRTGNIGCLVDAGRRRVADATPSPSHIITPRKVTSGFRGGSLSPRN
ILHLNARIAAQPHRPEIDGGRVPLHRRGLRPDDILPGEHHRHEADGGRRKLDCMAAVLQR
EAKEGVKAVKATGQTREAQLARERLPIEPREERSKVEGIANMLSQAITTQHLLFASLGSA
EYMEFVLKNPFNVPQTVTILSDDPELSVIANTEEWQYFKALTQTPTPLEENMFQWEEGAP
GPRVYLRPKESIHIPLKYQSFLCDHTMALQGPGYLPTGKGSQMAKKNLSNIVAAKTIKVA
FKAEDGKPMAICQVNVEPTPHVVDQTFRLYHPELCFLKKALRLPPWHDPAVEAPDGRTHI
SVRCSDPNIICQTRMLVPGEPQDVYLKVPGSPSPTVKKFFVMVFTDKWMAAPSQIWQVYV
HFLERVDVGCVTGQRTCQSLVLRGKQTVRKVKCFSSHPKEIQVDPEGVFVLPPSAVQELQ
VKVQPWRAGSRFLYVNAVDVENQRLITAWLLCLNVHQPVLSKAFEVSVPVGGGRGSSRKI
TYTNPYTSGRTFLLRSDHPDLLQFRQDKFQISGGESYTIGLRFAPSQSPGSVEIMVYVNN
LEEKTEETFCVKVNYS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcgggcgacgtgtccacggcggcggacggctggagggaggcgttcgacggg
agccggctggttcccgccccgagccccgccgtccgccgggcggcggagagccacctcgcg
ggctcccagggcttccagctgcgcctcggccggctcgccgcggctcccctcccgcagtcg
ccagagatgccagaggtggaacgggacttgacccaccagctgcgagtgaccctgtttgat
caaaatcaccggcacttcttcgggaagacgtggaagagcccagcgcacaggatgaccaac
aacaagatatgcttcaatgaggtcctatacttccatacgtctgtgcggttgcccagcacg
gtggtggtcctggagctggtgttgttgtcgcccagaccagacggttcccagcaggccctg
ggcagaggcttcactgtcctggagctttttaccagccggccagaggctcaggctgctgat
ggggacagaaggctggatctacaccatggatcaccaagaagcctcctccacccactgctg
aaggactcagttgattacagcagtctcctgaagactattgatggggcacatttggactgt
gtggtaaaaagtcatcccgcgatggttcccatgatgcacctccttcctgagaacgtcctc
gtgtccggagacgagaacattcctgggctcgcagcgtctccaacaggagatgctctgctg
cggcctcagctgctcaagatgctgccgttcaccctgaacagactgaccatctccctccag
ccgtccctggagacgttcgagagccagctgctgcagctgatcaatgctgactgccataac
acaaagcagcctggaccggagggggcactgagcacagttgccatccaggaaaggaggctc
cacgtcggggtccacaatggctggtgtttcctcgacaagccccaggtggtggtgctggag
ctcctagcgtcgggggccagagggcgagcagacagcacctccaaacggagcacctcggac
agctctgcgccatcatccctcccgcaggtcctgggccttcgcagcagcctggagctcaag
gtgaccaatcatcaggctttggccattgtcttccagctggagtacgtcttctctgctccg
attgggcgggagactatgctgtctgccacctcctcctcccgagcggccttcttgcagtgc
ctgcgttgggggattttctgccccttccagcagccggctgactggaagggggaagagata
cagcttgttctgcgaggaggtgcaaagccaaacccttacggagtcatggtctacggcaca
gagatgcctgccaaggctcagagctccgtgccactctccgctccaggcacaactcaggtg
aacgacgtgataaccttccggctgtcgtccggtctggagaggaaggcgtccagcccaaag
gcatccctgaggacgaggcaggaagatgtgcaacatgagaggagattaccgtcatcgccc
ctacgagttcaaaaacgtcttccagcagcctctcctccagaatctccacaaggccccggg
ctctcgctgtctcagctggcagcgccatgccgctacccgaccatcagccactccagctcg
gcgttgccgtggcaacagtcgtttccctctccgctccatccttccctgttggcatcagcc
caccagctgtcacatgttgccttctcagcagtcagcaacattgcccacctggaaatggac
ctccagcgggacggagatgtgtcaccctcagctcagaatgaaggagcccaacttgaggag
ctgcccttcacccctgtccacgcccctgtcatcactctggggatgaatgtgcccagttcc
tcctcagtcagctcccggagctcgctcgcccacctctactcggccggcttcccccagatc
gtcgactgtggcgggcaggtggcggacgtgctggaccccacagagcccgtgcactttgac
ccccagcgcgaggagacggaccttctacagggcaacctgccggtgttccagttcctggcg
ttcaccagaatacctatagcgggtgccgggcccgattggccccgcgacgtctacttcacc
ttccagttctatcgcttcccgccagtcacatcgcagcagctcaaactgctgaccagtaac
agggttcaacacaagaccagcgatccgcttccctgtgtcctcgcccccgccggcaaagat
ggcaccgtcaacccaggctctccgggtctgcaggtgcagttcagagtagatgatgctttc
ctgaggccgggagagaagcgctggttccttcgctacctggcgcttcacaccatgcacatc
gacatctgggacagcgaatcgctgctcctcataggatcgactgccatcgagctcaagtat
atgttgcgccagggtaaaacagcagtgcaggctctccatgaggtggaggtgcttaccacc
gattacgtgggagaggacgccctgctgacgagcgcaggtttgggccagcgctcggcctcc
ggccccatgaccgtccacaccatcgtcaggggccggctgcacgtacgcacaggcaacatc
ggatgtctagtggatgctggcaggaggagggtagcagacgcaacgccgtctccttctcac
atcatcacgcctcgcaaagtaaccagcggcttcagaggagggagcctgtcccccagaaac
atacttcatctcaatgcgaggatcgctgcacagccacacagaccggagatagacgggggc
cgcgtgccgctgcaccgacgcgggctcagacctgacgacatcttgcccggagagcaccac
cggcacgaggccgacggcgggcgccgcaagctggactgcatggccgccgtgcttcagcgg
gaggcgaaggaaggtgttaaggcagttaaggccacgggtcagaccagggaagcccagctg
gccagggaacgtctcccgatcgagccccgcgaagagcgcagcaaggtggagggcatcgcc
aacatgcttagccaggcgatcaccacccagcacctcctcttcgccagcctgggctccgcc
gagtacatggagtttgtcctcaagaaccccttcaacgtacctcagaccgtcaccatcctc
agtgacgaccccgagctcagtgtcatcgccaacaccgaggagtggcaatacttcaaagca
ctaacccaaactcctacgccgctggaggagaacatgttccagtgggaggagggcgcccca
ggcccgagggtttacctccggcccaaggagagcatccatattcccctgaagtaccagagc
ttcctctgtgaccacaccatggcccttcagggaccgggctacttacctacaggcaaaggt
tctcagatggccaagaagaatctgtccaatattgttgctgccaaaactatcaaggttgcc
ttcaaagcagaagacggcaagccgatggccatctgccaggtgaacgtcgagccgacaccc
cacgtcgtcgaccagacattccgactttaccaccctgaactctgctttctcaagaaggcc
ctccgcctgccaccctggcacgaccccgcagtcgaagccccagatggtagaacccacatt
tccgtgcgctgcagtgaccccaacatcatctgccagacgaggatgctggtgccgggggag
cctcaggatgtgtacttgaaagtgccagggagtcccagtccaaccgtaaaaaagttcttt
gtgatggttttcactgataagtggatggcagcgccttcgcagatctggcaggtttacgtg
cacttcttggagcgggtggatgtcggctgtgtgaccggccagaggacctgtcaatcactg
gtgctgaggggaaagcagactgttcggaaggtcaaatgcttctcatcacaccccaaggag
attcaggtggatccagagggcgtgttcgttttgcccccctccgcggtgcaggagctccag
gtgaaggtgcagccgtggcgggccggcagccgcttcctgtacgtgaacgcggtggacgtg
gagaaccagcggctgatcacagcctggctgctctgtctcaacgtccatcagcctgtgttg
tctaaggcatttgaagtgtcggtcccagttggtggtgggcgcggcagttcccgtaaaatc
acctacaccaacccctacaccagcggccgcacgttcctgctccgctccgaccatccagac
ctgctccagttcaggcaggataaattccagatcagcgggggagagagctacaccatcgga
ctacgatttgcccccagccagagtcccggctcggtggagatcatggtctacgtgaacaac
ctggaggagaagacggaggagacgttctgtgtgaaggtcaactactcgtga
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