Scophthalmus maximus (turbot): 118316824
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Entry
118316824 CDS
T09850
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04510
Focal adhesion
smau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118316824 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118316824 (lamb2l)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
DUF7310
Alanine_zipper
RAC_head
F5_F8_type_C
DUF2573
Oscp1
Motif
Other DBs
NCBI-GeneID:
118316824
NCBI-ProteinID:
XP_035500938
LinkDB
All DBs
Position
3:complement(21883780..21943633)
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AA seq
1858 aa
AA seq
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MRLSRDSLVSMRPSILMPIMSAQLSILLLAISVSGQELPSGPHGCTEGSCYPATGNLLIG
RAVNLSSTSTCGLGGPEHYCIVSHLQESDKCFECNSQHRYDPYRHRNSHRIENVINLMDR
NEDHTWWQSVNGQETVSIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRF
FASNCTRTFPSIPANGLHHINDIICEERYSDIEPSTNGEVIYKVLDPAIHVKDPYSLDIQ
ELLRITNLRINFTKLNTLGDDLLDRRFDVLQKYYYAIYELVVRGSCFCYGHASECAPVPG
VDARENGMIHGRCVCNHNTEGLNCERCQDFHNDLPWRPAEAENSHTCRECNCNGHSNQCH
FDMAVYLATANVSGGVCDDCQHNTMGRNCEMCKPFYFQDHIRDIRDPQVCVACDCDPVGS
LEGGVCDSHTDPDMVMIAGQCRCKANVKGMRCDDCKEGYYGLSQNDPLGCQPCNCDPRGI
IMIGAPCDQISGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMME
NGQCDCRRHLIGRQCSEVQPGYFCAPLDYYKYEAEDATGHSPSDPALPGQVRPQAETDCV
QHLSNQLRRHRRHRRVTNSQQHRAALRRIRQLQQTPDVRTVHREHSPSHMVTWTGPGFAR
VKDGAGLVFTIDNVPYAMEYDIMIRYEPESTEDWEAIVSITSVSLPSSLRCGNLLPTEQL
YTVTLPHRNRYIEMPRPFCFEPSNHYVVSIRFQRHGVSHRHLTAFILIDSLVLIPKYTEL
PGFQGNEPEAEQRREEMVRYMCLDSFMITPMPALAEMCSKLICSISSIIHDGALPCQCEP
QGSLSGECDRVGGQCRCKPNVMGQHCDQCAPGTYGFGVNGCAACDCHSEGSLSHQCDPVT
GQCQCRQGATGRRCSDCQPGQWGFPSCSPCQCNAHADLCDPSTGECRDCRDYTAGQLCER
CEDGFFGNPVLGSGEHCRPCPCPGVPGSGHFNGHSCQADHSSNQIICNCRQGYTGPRCDQ
CAPGYYGNPEQPGGHCLPCECSGNIDTQDPESCDPRTGQCLKCLYHTDGPSCCHCQHGYY
GNALAQDCRRCTCVTAGTVQSACSDGQCHCDRQTGACLCKENVAGHNCDQCAPNHWNYGQ
DGGCEPCHCNPQHSLGPHCNMFTGQCHCRPGFGGKQCTECEQFHWGDPQVQCQECNCHPL
GSEMAQCDRATGTCECREGVAGKQCDECARGFTGVFPECVRCHSCFQLWDDALCQMKRDL
DHIQYTVRKILESGITPGVEDTRIKELERKLRQVQDLISMEDSDRVHQLIGQSIDDLRAE
IALTDGRLMAVGRELNATAEEEEALRRTLNVLERELRDINTTMAHKQRLLDEYLTSGFAD
QFEKVKKYYRVSLEAEEKCNASVSGPFSAVEQSKETRALTEDLLDASKDKFLRALAAQNK
SLEELQQKTHHLDEKVHHLSHKVCGGHSNASVNGSCPDSQCGGAGCRDDQGNHVCGGDGC
NGTVSASVAALNHARNVADGLNTANEELQGVAKKLQDIATLTQDVKNQAMNTLEKAQKKK
DHFESNNKKLKDFIKKIRYFLTEEGADPESIEKVALQVLSIALPVNRTTLDNMVMQIKDS
LSNLTNVDGIVNQTMQHVAKAKELLDAAKDAKRRAEGVNDTAKSTKRALDVSEKAIEEAK
SALKEAHNNLNRTRNATAEVEESLGQLEDKQMEVMMRLNNLSVGVEALRNKTEQNRQMAE
DARALANNATRQASSLEQSLNDTEKRYSELRTKVDSLGGESGGLNSINQRAKDMKKEADD
LLGKATSGMKQLEKLEKKFKTNERRMQRQRVELDELKENATVVRDEIREQVQKYSNCV
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtccagagacagcttggtgtccatgcgtccaagcatcctgatgcccatcatg
tccgcgcagctcagcatcctcttgttggctattagtgtgtccggacaagagctcccatca
ggccctcacggctgcacggagggaagctgttaccctgccacaggaaaccttctgattgga
cgggctgtcaacttatcttccacgtccacatgcggcctgggggggcccgagcactactgc
attgtcagccatctgcaggagtcagacaagtgtttcgagtgtaactcccagcaccgctac
gacccgtaccgccacaggaacagccatcgcattgaaaacgtgatcaatctcatggacagg
aatgaagaccacacctggtggcagtctgtcaacggacaggagactgtgagcatcagactg
aacctggaggccgaattccacttcacacatctcatcatgaagtttaagactttccgccct
gcagctatgatcatcgagcgttcggcagatttcggccgcacgtggcgcccctaccgcttc
ttcgcctcaaactgtaccaggaccttccccagcatcccagccaacggcctgcaccacatc
aacgacatcatctgcgaggaacgctactcagacattgaaccctccactaatggagaggtc
atttataaagtgttggatcctgccattcatgtgaaagacccctacagcttggacattcaa
gaacttttgcgaatcactaacctgcgcatcaacttcaccaagctcaacacccttggagac
gacctgcttgaccgacgcttcgacgtcctgcagaaatattactacgccatctatgagctg
gtggtcagaggaagctgcttctgttatggtcatgcctcggagtgcgccccagtgccaggg
gttgatgcccgggagaacggcatgatccatggtcggtgtgtatgcaaccacaacacagaa
ggcctgaactgtgagcgctgccaagatttccacaatgacctgccatggagacccgcagag
gccgaaaactcacacacatgcagagagtgtaactgtaacggccactcaaaccagtgtcac
ttcgacatggcggtgtacttggccacggctaacgtaagcggaggagtgtgcgatgactgt
cagcacaacaccatgggccgcaactgtgagatgtgcaaacctttctacttccaagaccat
atcagggatatcagggacccgcaggtctgtgttgcctgtgactgtgaccccgtgggctcg
ctggagggaggtgtgtgtgacagtcacaccgacccagacatggtgatgattgcaggacag
tgccgctgcaaagccaacgtgaaaggcatgcgctgcgacgactgcaaggagggttactac
ggactgagccagaacgacccactgggctgccagccttgcaactgtgaccctcgtggtatc
attatgattggagctccttgtgatcagatcagtggggactgctcctgcaaaagatacgtc
acaggtcgctactgcaaccagtgtctgcctgaatactgggggctcagtaacgacctggcc
ggctgcagaccctgtgattgtgactttggtggagccttcaacaacaggtgcatgatggaa
aatggccagtgcgactgcaggagacatctgatcggtcgacagtgttcagaagtgcagccg
gggtatttctgtgctccgctggactactacaagtatgaggctgaagatgccactggacac
tcccccagtgaccctgcgctgccgggccaagttcgtccccaggcagagaccgactgtgtt
cagcacctcagcaatcagctgaggcgtcaccgccgccaccgccgcgttacaaactcgcag
cagcatcgggcggcactgagacgtattcgtcagcttcagcaaacaccggatgtgaggacc
gttcaccgagagcactctcccagccacatggtgacttggaccggacctggctttgcccgt
gtgaaagatggtgcagggctggtgttcactatcgacaacgtcccctacgccatggagtac
gacatcatgatccgctacgaaccagagtccacagaggactgggaggccatagtcagtatt
acctcagtatcgctgccctccagtctccggtgtggaaacctcttaccgacagaacagctc
tacactgtaacactgccgcaccgcaacagatatatcgagatgcccaggcccttctgtttc
gagcccagcaatcattatgtggtttcaattaggttccagcgccacggggtctcacacaga
catctaactgccttcattctcattgactcgctggttctgatccctaagtacaccgagctt
cctggtttccaaggtaacgagccggaagcagagcagcggcgggaggaaatggttcgctac
atgtgcctggattccttcatgatcacgccgatgcccgccctggctgagatgtgctcaaaa
ctcatctgtagcatttcctccatcattcatgacggtgctctgccctgtcagtgtgaacca
caaggttccctgagtggtgagtgtgatagggtcggaggtcagtgtcgatgtaaacccaac
gtcatgggtcagcactgtgaccagtgtgccccaggaacctacggctttggagtgaatggc
tgcgcagcctgcgactgtcactctgagggttcattgagccaccagtgtgacccagttaca
ggccagtgccagtgcagacagggagccactggacggaggtgctcagactgccaaccaggc
cagtggggcttccccagctgcagcccctgtcagtgtaacgctcatgcagacctctgtgac
cccagcactggggagtgtagagactgcagggactacacagcgggacagctctgtgaacgt
tgtgaggacgggttctttggcaatccggtgcttggctcaggggagcactgtcggccctgt
ccctgccctggtgtcccgggctcaggtcactttaacggacactcctgtcaagctgaccat
agctcgaaccagatcatctgtaactgcagacaaggttacactggaccccgctgtgaccag
tgtgcccctggttactatggtaacccagagcagcctggtgggcactgcctaccgtgcgag
tgcagcggcaacattgacacccaggaccctgagtcgtgcgatcccaggaccggccaatgc
ttaaagtgcctgtaccacaccgatggcccctcctgttgccactgtcagcacggttactat
ggcaacgctttggcccaggactgcagacgttgtacctgtgtgactgctggcactgtccag
tccgcctgcagtgacggacagtgtcactgtgacaggcagaccggagcctgcctctgcaag
gagaacgtggctggccacaactgtgaccagtgtgctccaaaccactggaactacggacag
gatggtggctgcgagccctgtcactgcaacccacaacactccctcggacctcactgcaac
atgttcacgggccagtgccactgtcgtccaggctttggaggcaaacagtgcactgagtgt
gagcagttccactggggagacccacaggtgcaatgtcaagaatgtaactgtcacccgctc
ggctcagagatggcccagtgtgaccgagccacggggacatgcgagtgccgggagggagta
gcggggaagcagtgcgatgagtgcgcccgaggcttcacaggcgtctttccagaatgcgtc
cggtgtcactcgtgcttccagttgtgggacgatgcgctgtgccagatgaaaagggacctg
gatcacatccagtacaccgtgcggaagatcctggagagcgggatcacgcctggggtcgag
gacactcgcatcaaagagctggagaggaagctgaggcaggttcaggatctcatcagtatg
gaggacagcgacagggtccaccagctgattggacagagcatcgatgacctcagggctgag
atcgccctgactgacgggcgtctgatggccgttggccgggagctgaacgccacagcagaa
gaagaagaggcactaagacgcacactgaatgttctggagagagaactaagggacatcaac
accactatggctcacaaacagcgtctgctggatgagtacctcacctctggatttgcagat
cagtttgagaaagtgaagaagtactatcgggtgtcgctggaggcagaagagaaatgcaac
gcctcggtgtccggccctttcagcgcggtggaacagtccaaagaaacccgtgcgctcacc
gaagacctgctggacgccagcaaagacaagttcctccgcgccctggccgctcagaacaag
tcattagaggagctgcagcagaagacccaccacttggatgagaaggtccatcacctcagt
cacaaggtgtgtggtggtcatagcaatgccagtgtaaatggcagttgcccagacagtcaa
tgtggaggtgccggttgccgcgatgatcagggtaaccacgtgtgtggaggagatggctgc
aacgggacggtgagcgcctctgtagcagccctgaatcacgccaggaacgtcgccgatggt
ctgaacactgccaacgaggagctgcagggtgtcgcaaaaaagctccaggatatagccaca
ctgacgcaggatgttaagaaccaagcgatgaacacactggagaaagcccaaaagaagaag
gaccactttgaaagcaacaacaagaaactgaaagatttcattaagaagatcagatatttc
ctcactgaggagggagccgacccggagagcatagagaaagtggcgctgcaggtcttgtcc
attgcgctgccggtcaacaggaccacgttggacaacatggtaatgcagataaaggacagc
ctgtccaacctcaccaacgtcgatgggatcgtcaaccaaaccatgcagcacgtcgccaaa
gccaaggagctgcttgacgcagccaaagatgccaagaggcgagcagaaggagtgaatgac
acagccaaaagcaccaagcgggcactggacgtgtctgagaaagccatagaggaggcgaag
tcagctctgaaggaggcgcacaataacctgaacagaacaaggaacgctaccgctgaggtg
gaggagagcctgggccagctggaggataagcagatggaagtcatgatgcgtttaaacaac
ctctccgtgggggtggaagctctgaggaacaagacggagcagaatcgacagatggcggag
gacgccagagcactggctaacaacgccactcgccaggcatcctcactggagcagagcctc
aacgacacagaaaagcgttacagcgagctgcggacgaaggtggactcgctcggtggggag
tctggaggtctgaacagcatcaaccagagggcaaaggatatgaagaaggaggcggatgac
ctcttaggcaaagccaccagtgggatgaagcaactggagaaactggagaagaagttcaag
actaacgagcggcggatgcagaggcagcgtgtggagctggacgagctgaaggaaaacgcc
accgtggtccgggacgagatccgggaacaagtgcagaagtactccaactgtgtttga
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