Scophthalmus maximus (turbot): 118316831
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Entry
118316831 CDS
T09850
Symbol
srsf6a
Name
(RefSeq) serine and arginine rich splicing factor 6a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
smau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118316831 (srsf6a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118316831 (srsf6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118316831 (srsf6a)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
SR proteins
118316831 (srsf6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118316831
NCBI-ProteinID:
XP_035500952
LinkDB
All DBs
Position
3:complement(16368188..16373177)
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AA seq
399 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLMEVDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDSHGGGYSGGGGGGGGGGGGGGGGGGGGGGRSSGYSSRNSRTG
RDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSPSD
LKRAIDKLDGTDINGRKIRLVEDRSRKRKSYSGSRSRSRSRRRSRSRSRRSSRSRSRSRS
RSHSRSRSHSNKRRQNSRSRSGRKSRSKSGERKSHSRNRRSLSRSRKSKSKSRSRSRSRK
SQSRSADRKSKSRSKSRSKVKSERGSRSRSKEMSVNKKSRSRSASPVENGKEERAAKSAS
RSPSPREEVRRSKSRDKRSASRSKSRSRSCSRSRSPSQD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggtttacattgggcgactgagctatcatgtccgcgaaaaagacatccagcga
tttttcagcggatacgggaaactcatggaagtcgatttaaaaaacggctacggattcgtg
gagttcgaggacaaccgagacgccgacgacgccgtgtacgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtggaacatgcccgtgggccgcggcgagaccgagatagccac
ggtgggggttactcgggcggcggaggtggtggtggtggcggcggaggaggaggaggagga
ggaggcggcggcggtggtgggcgcagtagcggttacagcagccgaaacagccgcactggc
agggacaagtatggacccccagtccgtactgagtaccgtctcatcgtggagaacttgtcc
agccgctgcagttggcaagaccttaaggacttcatgcgccaggccggggaagtgacctac
gcagatgctcacaaggagcgcaccaatgagggagtgatagagttccgatccccgtcggac
ttgaagagggctatagacaaattggacggtacagacatcaatgggcggaagattcgtctg
gtggaagaccgctctcgtaaacgaaagtcctactctggcagccgctccagatctcgtagt
cgccgccgctctcgcagcaggagccgcaggagctcaaggagccgttccaggagtcgctcc
agatcccactccagatctcgttcccatagcaacaagagacgtcagaattcccgctccaga
tctggaaggaagtctcgctccaagtcaggagaaagaaaatcacattctcgcaatcgcagg
tctctttcccggtctcgcaaatctaaatctaaatctcgttctcgctctcgctcccgcaag
tcccaatcccgttcggccgatcggaaatccaagtctcgctcaaagagccgttctaaggtg
aagtcagagcgcggttctcgcagtcgttcaaaggaaatgtccgttaacaagaagtcccgc
agtcgctccgcttccccagtagagaacgggaaggaggagcgtgctgccaaatctgcctcc
cgctccccatccccacgggaggaggttcgccgatccaagtcgagggataaacgctcagcc
tcccgctcaaagtcccgttcaagatcttgctcccggtctagatcaccttctcaggattag
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