Scophthalmus maximus (turbot): 118316916
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Entry
118316916 CDS
T09850
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118316916 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118316916 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
118316916 (fgd1)
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GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
PH_2
zf-RING_5
PAP1
Motif
Other DBs
NCBI-GeneID:
118316916
NCBI-ProteinID:
XP_035501091
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All DBs
Position
3:8346632..8366748
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AA seq
1085 aa
AA seq
DB search
MSHRQRLSLLSRGESRRPTVKPRAKAGSLQRLSRSWAERRRGVGWAAYPRCGAAVSWTRR
RRTKSRSRPYHRQQKKGRGRLDCLWRTRSRGPSSSSSPSLLTKSLSLEPSCSPCGHQGAL
DADAPQQPSSDPGPVSLEGGPLLTGRRGSANGLLLVNDTGPPELPATTIIPPSKSRPLPQ
GHKPQVPPKPPHLQQAGVSKPRLRGPDKPLPPPPPCRPLPADPRGGRTPPTRTDGTASPT
CVLSLIEKFEREQIIVVPDITGGALCPRLPDAPSSSSRPSSPPSSSSFPTPPPPDEKLPS
DIKGHHDITVGGEEEEESELLNDDDDEDEELAVACGDDVHQKRLSMESGYSASEKHPEDD
VVAVDMREQQQQLPLLLDQSEIPSERLSLPSSQTDGKLANRDSGIDSISSPSHSEELCFA
GVEDGCVAYPCSPALLPRLSSSSSYAGEGGEGEGDEGGVRGAARRRRDFSEDGDSDLEEE
EAELTLVLSPPKTDRQDSAELSVQQRVFNIANELLHTEITYVSKLHLLDQVFCARLLEEA
RSRSSFPCEVVQGIFSNICSIYCFHQQFLLPALQKRMEEWDLNPRIGDILQKLAPFLKMY
GEYVKNFDCALELVNTWMERSAQFKTIIQEIQREERCGNLTLQHHMLEPVQRIPRYELLL
KDYLHRLPEDAPDHRDAQKSLELIATAAEHSNAAIRKMDRMRKLLKVYELLGGEEDIVNP
TNELIKEGHILKLSNKNGTTQDRYLILINDRLLYCVPKLRLIGQKYGVRARIDVDGMELK
ETSSAAVPRTFVVSGKHRSLELQARTEEEKKDWIQAIQATIQRHEQTVESFRHLNCSLRD
DESTPPHSPSCVELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSE
FRARLSYDNNRTNRVCVDCYATLVGALPSPATLTSSIQRRRSILEKQASLAAENSVICSF
LHHMEKGGGRGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSVPLIGFEVSLPESCDRLER
RHAFKISQSHLTLYFSAEGEELQRRWIDVLSRAGRGEEPQVHRPIVESLEEEGEELVTAV
EGENT
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcgacaaaggctgagcttgttaagcagaggagagagcaggaggccaacggtg
aagccaagggcgaaggctgggtctctccagaggctcagcaggagttgggccgaacgcaga
cgaggagtcggctgggctgcctaccccagatgtggagcagcagtcagttggacccgccga
cgaagaaccaagagcagaagccggccgtaccaccgacagcagaaaaagggcagaggtcgg
ctggactgcctatggagaaccaggagcagaggtccctcctcctcttccagtcccagcttg
ctgactaagagtctctctctggagccatcctgctcaccgtgcggtcatcagggggcgctg
gatgccgatgctccccagcagccaagctcagacccaggacccgtctccctggagggaggc
cctctgttaacagggcgccgcggctcagctaacgggctgctactggtcaacgacacgggg
ccgccggagctgccagctacaacaataataccaccgagcaagagcaggccactgccgcag
ggacacaaacctcaagtccccccgaagcccccccacctccagcaggcaggggtgtcaaag
ccacgcctcaggggtccagacaagcccctcccccctcctccgccatgtagacccctccca
gcggaccctaggggggggcggactccgcccacccgcaccgacggcaccgcctcccccacc
tgtgtcctctcactcatcgagaagtttgagcgtgagcagatcatcgtggtacctgacatc
actgggggtgctctgtgtccccgccttcctgacgccccctcatcttcctcccgaccctct
tcaccaccctcatcatcatcattccccacccctcccccacccgatgagaagctgccctct
gacatcaaaggtcatcatgacatcactgtggggggtgaggaggaggaggagagtgaactg
cttaatgatgatgatgatgaagatgaagagctggcagtggcgtgtggtgatgacgtccat
cagaagcgtctgtccatggagtcaggttacagcgcctcagagaaacatccggaggacgat
gtggttgctgttgacatgagagagcaacaacaacagctgccactgctccttgaccaatca
gagatcccttcagagcgcctgtcgctcccttcctcgcagacagacgggaagctagccaat
cgggacagtgggattgatagcatcagctcgccatcgcacagcgaggagctgtgcttcgcc
ggcgtggaggacgggtgcgtggcttatccttgcagccccgccctcctgccccgcctctcc
agctcgtcctcatacgctggggagggaggtgagggggagggggatgaggggggcgtaagg
ggtgcggcaaggaggaggagggacttctctgaggatggagacagtgacctcgaggaggag
gaggcggagctaacactggtgttgtctccgcccaaaacagacagacaagactctgctgag
ctgtctgtccagcagagggtcttcaacattgccaacgagctgctgcacactgagatcacc
tacgtatctaagctccatctcttggaccaggttttctgtgccagactcctggaggaggct
cggtctcgctcctcctttccctgtgaagtcgttcagggaatcttctccaacatctgctcc
atctactgcttccatcagcagttcctgctgccagcgctgcagaaacggatggaggagtgg
gacttgaacccccggatcggggacatcctgcagaagctggctcccttcctgaagatgtat
ggagagtacgtgaagaactttgactgcgccttggagctagtgaacacctggatggagaga
tcggctcagttcaagaccatcatccaggagatccagagggaggagcgctgtggtaacctg
acgctgcagcatcacatgttggagccagttcaaaggattcctcgctacgagctgctgctt
aaagattatctacaccgactgccagaggatgccccggaccacagggacgctcagaagtct
ctggagctcattgccacagcggctgaacactccaacgccgccatcaggaaaatggatcga
atgaggaagctgttaaaagtgtacgagttgctcggaggagaagaagacattgtcaaccct
actaacgagctcattaaagagggacacatcctcaaactgtcgaacaagaacgggaccacg
caggacagatacctcatactgattaatgacaggttgctgtactgcgtcccaaagttgcgt
ctgattggtcagaagtatggtgtccgcgctcgcattgatgtggatggcatggagctgaag
gagaccagcagtgctgcagttcccaggacgttcgtggtgtctggaaagcacaggtccctg
gagctgcaggccaggacagaggaggagaagaaagactggatccaggccatccaggcaacc
atccagagacatgagcagacggtggagagcttcagacatttgaactgctcactacgagat
gatgagtctacaccacctcactccccgagctgtgtggaactggggaaacgagctccaact
ccgataagagagaaggaagtgactctgtgtatgaaatgtcaggagccattcaactccatc
accaagagacgacatcactgcaaggcctgtggacacgtggtttgtgggaaatgttcagag
tttcgtgctcgtctgtcgtatgacaacaaccgaaccaatcgcgtttgtgtcgactgctac
gccacactggtgggagcgttgccctcgcccgccacgctgaccagcagcatccagaggagg
cgctcaatcttggagaaacaggcctccctggcagcagagaacagcgtgatttgcagtttt
cttcaccacatggagaaaggaggggggcggggctggcagaaagcctggtttgtcattcct
gagaacgagccactggtgctctacatctacggagcgccacaggacgtgaaagcgcagcgc
agcgtccctctgattggcttcgaagtctctctacctgagtcatgtgaccgcctggagagg
cgccacgccttcaagatctcccagagtcacctgaccctgtacttcagcgctgaaggggag
gagcttcagcggcgatggattgacgtcttgtcgagggccgggaggggggaggagcctcag
gtccaccggccaattgtggagagtctggaggaggagggagaggagcttgtgactgctgtc
gagggtgaaaacacgtga
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