Scophthalmus maximus (turbot): 118317071
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Entry
118317071 CDS
T09850
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118317071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118317071
03036 Chromosome and associated proteins [BR:
smau03036
]
118317071
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118317071
Coactivators
SAGA/TFTC/STAGA complex
118317071
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118317071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
Motif
Other DBs
NCBI-GeneID:
118317071
NCBI-ProteinID:
XP_035501412
LinkDB
All DBs
Position
3:complement(2965392..2977209)
Genome browser
AA seq
906 aa
AA seq
DB search
MAAGSDLLGDVFLGAELDEKVVSDVVGSLERELTAAADARVRPAAGAVGSAAVARNSGVH
GGKMGLSGADEHGGVTGAAGPDTDGAAGTPSPAGPSATAAQSQPKSGAASCVGTPAALTV
NGSAVVVNCRVPGGSSADSSLSPPPVDGGSVAAAQSTAPVVSAKSVPTVTLVRPPMQTPT
NTGGVNPPSGLTAAAPVTVVGPLVNTKCDPAKTPLQTGVVAPTLRSPTGPQILRTSVPSA
VSSAPPGGVRVIAPQVLAPRQNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQMQAQS
QSQSAMTPRPAAPTSTPPVHITSLQAPGSSLLARSVAPTTTTTTTIIKQGSTAQTTMTTT
SKLQRPPVLQNTIMLGAGATTPGQPLGTSTTTVPGGAVATTGTQRVGPPVATGTPMAPTP
VTAETLENVKKCRNFLSTLIKLASSGKQSSETIASVKELVKHLLEAKMEPEDFTSRLYRE
LNSSPQPYLVPFLKRSLPALRQMTPDPEAFIQQSLLPLPNTQSVAASTALTAVVLRPPLS
STTAKAAVSSTAAKSHTVISLSQSPHGRAGLQQGATVRPQVTVAPSPMVTLRGQPHSRII
VGPTQVVKQLQTVPAVKQTLAQGSRGHVVTQTLAGAQRNQLKEAGAGNFRDDDDINDVAS
MAGVNLSEESARILATNSDLMGTVTRSCKDEAFLSSSSLARRVLLIGKKFGISELGSDVV
NYISHAAQQRLQSLLEKVSQVAQQKNVSFKEDERHQQVSDVRAQLKFFEQLDQMEKQRKE
EQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIMQREANLTALAAIGPRKKRK
TFSPVRGAGAEGSGSGPCPPSGSGGSGSRQFLRQRITRVNLRDLLLCLENETGTSRSQLL
YKGFLK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttgctgggcgatgttttcctcggcgccgagctggacgagaaa
gtggtgagcgacgtggtggggtccctggagcgagagctcacggcggcggcggacgcccgc
gtccggcctgcggcgggcgccgtcggcagcgccgccgtagctcgcaactccggcgttcac
ggcggcaaaatgggactttcgggcgcagacgagcacggaggtgtcaccggcgctgcgggg
ccggacacggacggagcagctgggaccccgtcgccggcaggaccgagcgcgacagccgcg
cagagtcagcccaagtcgggcgcagcgtcgtgcgtcgggacgcccgcggctctgactgtg
aatggaagcgcggtggttgtgaactgtcgcgtccccggtggctcgtccgctgacagcagc
ctgtcgccgccgcctgtcgacggggggtcggtggccgcagctcagagtactgcccctgtg
gtgtctgcgaagagtgttcccacggtcacgctggtgaggccgcctatgcaaactcccacc
aacaccggcggagtcaacccgccctcgggtctgacagcagcggcgcccgtcacggtggtt
gggccgcttgtcaacaccaaatgtgaccccgcaaagactccactgcagaccggcgtcgtg
gctccgaccctgaggagtccgaccggcccacagatcctgaggacttcagttccgtcggcg
gtctcctccgctccgccgggcggagtgcgagtcatcgctcctcaggtgttggctcctcga
caaaacgccccaaacatccagaacattcagcttcccccaggcatggtgctggttcgcagt
gagagtgggcagctgctgatgatacaccagcagaccttggcccagatgcaggctcagtcg
cagtcccaaagcgccatgacaccgcgccccgcagcccccaccagcactccacctgtccac
atcacgtctctgcaggctccgggctcgtccctgctggctcgctcggtcgcgcccaccacc
accaccaccaccaccatcatcaaacagggttccacagcacagaccaccatgacgaccacc
tccaaattgcagaggcctccggtactgcagaacaccatcatgttgggagcaggtgccacc
acccccggtcagcccctgggaacctccaccaccaccgtcccaggcggagctgtggccacg
actggaacgcagagggtggggccccctgtggccactgggacacctatggctccaacgccc
gtcacagctgagactctggagaacgtgaagaagtgtcggaactttctgtccacgctgatc
aagctggcgtccagtgggaaacagtcctctgagaccatagccagcgtcaaggagctggtc
aaacatttgctggaagcaaagatggagcctgaagatttcaccagtagattataccgggag
ctcaactcctcaccgcagccatacctcgtgcctttcctgaagagaagtctccccgctctg
cgtcagatgaccccggacccggaggccttcatccagcagagcctgctgcctctgcccaac
actcaatcggtcgcagcctccaccgctctcaccgccgtggtgctgcgacctcctctgtcc
tcaaccacggccaaagccgccgtcagctccaccgccgccaaaagtcacaccgttatcagc
ctaagccagtcgcctcacggcagggcgggactgcaacagggggcgacggtgaggccgcag
gtcaccgtggctccgtctccaatggtaacgctccgaggacaacctcacagccgcatcatt
gtgggtccgacgcaggtcgtcaaacagctgcagacggttccagcagtgaagcagacgttg
gctcaggggtcaagaggtcacgtggtcactcagactctcgccggcgctcagaggaaccag
ctgaaggaggcaggagcaggaaacttcagggacgatgacgatatcaacgacgtggcctcc
atggccggagtcaacttgtcggaggagagcgcccgtatcttggcaaccaactctgatctc
atgggcacggtcactcgctcctgtaaggacgaagccttcctctcctcctcttcgctcgcc
cgcagagttcttctgatcggcaagaaatttggcatcagcgagttgggctcagatgtggtc
aactacatttcccacgctgcacagcagcgactgcagagcctgctggagaaggtgtcgcaa
gtggcgcagcagaagaacgtgtccttcaaggaggacgagcgtcaccagcaggtgagcgac
gttcgagcgcagctcaagttcttcgagcagctggatcagatggagaagcagaggaaggag
gagcaggagagggagattctgttgaaggctgccaagtctcggtcgcggcaggaggaccct
gagcagctccgcctgaagcagaaggccaaagagatgcagcagcaggagttggctcagatc
atgcagagagaggcgaacctgacggcgctggcagcaatcggcccaaggaaaaaacggaag
accttctctcccgttcgaggcgccggtgcagagggctcggggtcggggccctgtccgccc
tcaggctccggtggatctggctccagacagttcctgcgacagcgcatcaccagagtgaac
ctccgcgacctgctgctctgcctggagaacgagacggggaccagccgctcacagctgctc
tacaaaggcttccttaaatag
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