Scophthalmus maximus (turbot): 118317253
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Entry
118317253 CDS
T09850
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118317253 (smc5)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
118317253 (smc5)
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Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
118317253
NCBI-ProteinID:
XP_047187270
UniProt:
A0A8D3BBD4
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Position
3:13290606..13303464
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AA seq
1077 aa
AA seq
DB search
MAEPRKRQRLSQVNSSSQTSTSSVSSVAGGQRDGAGEESRFVEGSILRLSMKNFLTYDYS
VVYPGPNLNMIVGANGTGKSSIVCAICLGLAGKTAILGRGDKVGLYVKRGCHKGFIEIEL
YKRGGNVVINREIHVENNQSLWMLNGRHCNQKTVEEEVKALHIQVSNLCQFLPQEKVGEF
AKMSKIELLEATEKSVGPPQMYQYHCELKNFRNKERELENAVKEKASFLEKAKQRNERNK
HDVNRYYEKKRHLDVIELLDKKKPWVEYETIRKELEDLKRERDEAKKQLSALRQAQSPML
KKIQQIDNHLKPTDAQIKAKTVAIKEASNKCKQKQDQLDRKHKEIEDIKQKLKLKQTEEE
DHQKRIGNTRRAIDDLKAELAKVGDQPDVTPQINAINVELRQIQEDRAKIEGEKGDLRRE
KDNLCAEARMLERKLNDMNNMMNVKEEKLRARHRDTHAALQWLRQNRKMFDGNVFEPMML
VINVKDHRFAKYVENHIPFQDLRAFVFQRKDDMEKFMTEVRDRMNLKVNSISAPEESYSK
RRPSRNIESLSRFGFFTYLREMFDAPEEVMSYLCLQYKVHDIPVGNEQTKSMIKTVIEEP
YLRVLYTSEEKYIVKRSHYSNKISTSNSALQRSQYLTITVDAEQKRQLEQQMRACEQKLR
DIDERLKVLQKEAVTLERRDNELLAEKKRLSELKGKKRQLEQKISTKQDSLRQMEQSAID
LNKIEEETKEKIAAVYSQKVSIVVAFMAQMKLRAKLTMEKVYLSLETVGLLAEKTKLEND
CREGASELKTTEQKCNRLEQRKVQLTEQCKGLLRRAKSTCRMQPDESLPEDLRNAFSELP
NTLDEIDAMLNEERSRAECFTGLSENVVDEYNKREQEIKHLETELEEKTNALSTYRQNIS
EAKERWLNPLKQLVEQINDKFSDFFRSMQCAGEVDLHTENEEEYDKYGIRIRVKFHSSTQ
LHELTAYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTAC
KETTSQYFFITPKLLQNLQYAEEMTILCVHNGAHMLPPNQWDEKTFIKRCLKRKAKA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcctcgcaagcgacagcgactcagtcaagtgaatagcagctcgcaaacgtcc
accagctccgtcagcagtgtcgcgggcggtcagcgcgacggagccggagaagagagccgt
tttgttgaggggtccatacttcgcctcagcatgaaaaacttcctgacctacgactactct
gtggtctatcctggacccaatctaaacatgattgttggagccaacggaaccggcaagtcc
agcattgtttgtgccatctgtctgggtctggctggcaaaaccgccatcctgggcagaggc
gacaaggttgggctttatgtcaaacgtggatgccataaaggatttattgagattgaactg
tacaagaggggtggcaatgtagtgataaacagagagatccacgtggagaacaatcagtcg
ctgtggatgctgaacggaagacactgtaaccagaaaacagtggaagaggaggttaaagct
ctgcacatccaagttagcaacctctgccagtttctgcctcaggaaaaagtaggagaattt
gccaagatgtctaaaatcgagttgctagaagcaactgagaagtcagtgggaccaccgcag
atgtaccagtaccactgtgagctcaaaaacttccggaacaaggaacgggaactggagaat
gctgtgaaagaaaaggccagtttcctagagaaggccaagcagaggaatgagaggaacaaa
cacgacgtgaaccggtactatgaaaagaagaggcacctggacgtgatcgaattgcttgac
aagaagaaaccgtgggtggagtatgagaccatccgtaaagagcttgaggatttgaagagg
gagcgagatgaagccaaaaagcagctctctgccctgaggcaggcccagtcgcccatgctg
aagaagatccagcagattgacaaccatttgaagcccaccgatgcacaaatcaaggctaag
actgttgccatcaaagaagcctcaaacaagtgcaaacagaaacaagatcagttggatcga
aaacacaaagagattgaggatatcaaacaaaaactgaaactgaagcaaacagaggaggaa
gaccaccagaagcggattggcaacaccagacgagcgattgacgacttgaaggcggagctc
gccaaagttggcgatcaaccggatgtgacacctcagatcaatgccatcaatgtggagctg
agacagatccaggaggacagagccaagatcgaaggagagaagggcgaccttcgacgggag
aaggacaacctctgtgccgaggccaggatgttggagagaaagctcaatgacatgaacaac
atgatgaacgtcaaagaggaaaagctgcgagcgcgccacagagacacgcatgctgctctt
cagtggctccgacagaacagaaaaatgtttgatgggaacgtctttgagcccatgatgctg
gtgatcaacgtgaaagatcatcgatttgccaagtatgtggaaaatcacatcccattccag
gacctgcgggcgtttgtcttccagaggaaagacgacatggagaagttcatgactgaggtc
cgtgacagaatgaacttgaaggtgaattctatttctgctcccgaggaatcgtattccaag
cggcggccatcccgaaatattgagtccctcagccgtttcggtttcttcacctacctccgt
gagatgttcgatgctcctgaagaggtgatgagttacctctgtctacagtacaaagtgcac
gacatccctgtgggcaacgagcaaaccaaaagcatgattaaaacggtgatcgaggagccc
tacctcagggttttatacacatcagaggagaagtacatagtgaagaggtctcactactcc
aacaagataagcacgagtaactctgccctgcaacgttcccagtacctcaccatcactgtg
gacgctgaacagaaacggcagctggagcagcagatgagggcatgtgagcagaagttacga
gacatcgatgaacggctgaaagtgctgcagaaggaagccgtcaccctggagcgccgtgac
aacgaactgttggcagagaagaagcgtctgtctgaactaaagggcaaaaagagacaactg
gagcagaaaatcagtaccaaacaagacagtctcaggcagatggagcagagtgccattgac
ctgaacaagatcgaagaggagacgaaagagaaaattgcagctgtctactcccagaaagta
tccatagtcgtggcgttcatggcccaaatgaagctgagagccaagctgacgatggagaag
gtgtacctgtctttggaaacggtggggctgttggcggagaagaccaagctggagaacgac
tgtagagaaggcgcctctgaacttaagaccactgagcaaaaatgcaaccgcctggagcag
aggaaggtccagctgaccgaacagtgcaaaggcctgttgaggagagcgaagtcgacctgt
aggatgcagcctgacgagtcattacctgaagatctgcgtaatgctttcagcgagctgccc
aacacacttgatgagattgatgccatgctgaacgaggagcggtccagggccgagtgcttc
actggcctcagtgaaaatgtcgttgacgagtacaacaagagagagcaggagatcaaacat
ctggagacggaacttgaagagaagaccaacgctctgagcacctaccgacagaacatatcg
gaggcgaaggaacgctggctgaaccccctgaagcagctcgttgaacagattaacgacaag
ttcagcgacttctttcgctccatgcagtgtgcaggagaggtagatctgcacacagagaat
gaggaggagtatgacaaatatgggatccgtattcgggttaagtttcacagcagcactcag
cttcacgagctgacggcctaccatcagagcggaggagagcggagcgtctccaccatgctc
tacctcatggccctgcaggagctcaaccgctgccccttcagagtggtggatgagatcaac
cagggaatggatcctgtaaacgagaggagagtgtttgacatcgtcgtccgtacggcctgc
aaagagacaacatcccagtacttcttcatcacgcccaaactgctgcagaatcttcagtac
gccgaggagatgaccatcctgtgtgtccataacggagcccacatgcttcccccgaaccaa
tgggacgagaagacgttcatcaaacggtgtctcaagagaaaggctaaggcatga
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