Scophthalmus maximus (turbot): 118317260
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Entry
118317260 CDS
T09850
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118317260 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118317260 (exosc10)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
118317260 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
MSL1_dimer
Motif
Other DBs
NCBI-GeneID:
118317260
NCBI-ProteinID:
XP_035501704
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All DBs
Position
3:complement(14754439..14764041)
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AA seq
914 aa
AA seq
DB search
MYTALSPAHTHTHTHTHTHVMDSSKSRGALQDSTSENNNNNNDGDEEKDELCPGFQDVDA
FVKYGLGAVLSATKASGALPQVGDEYDFYRSFPGFQEFCQSQGDQLLHCMSQIMQYHGCR
SLMRDRNKLTGLEERFDLVVDSNDAILERAGILLDEADGVNRSQQPVMPAGFQPPKIVVS
SWNRKSSGSGSRAETFRLLHAKNIARPQLKFREKVDNSNTPFIPKIFIKPNAVKPLPSYF
TSKQICKERPEDLDVPAALADFIHQQRTQKPVEDMFAHPYQYELDHLTTPESLLSKPEPQ
MYKPIAETNCSFIDSLEDLVALNEKLCSLSEFAVDLEHHSYRSFLGLTSLMQISTREEDF
IIDTLELRSEMYILNEAFTDPSIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNL
ARHSLDHLLKHFCTVDSDKRYQLADWRIRPLPDEMVQYARTDTHYLLYIYDCVKTQLLET
NHGQPGLLQSVWNKSKDISLKKYVKPIFTEESYLELQRKQKRSLNTQQHTAFRLLFAWRN
KLARQEDESTGYVLPTHMMIKISEELPREPQGIIACCNPVPPLVRQQINELHSLVQQARE
MPLLKAEIAAQKTKGLTPIKKPEVTLFGPHDTSRVSESDLPHFSPDELPVKQGVLFSEDE
HKMDVDDEKKSGLLAQAKITLFQEPETKNDQESLSVAHMKARRIIEAFENPFRMYLPTSD
VHVNENAKFDPSSKIFEISKRWKLQSIEQQQKELEAKRKAKADAKEQTKKVAEERNKAKQ
SYQESLQDVATVRQQAAESAKGGGKKRERVASEVGESTPKPTKKLIKSAEKPQKTEPPPQ
DSFTPFDYSQSDLKVFADPKSKDNTQFDPNRQAHDPKKKKNPKGQKSNSAAGNRSMSYMA
GKSERGFRHNWPKR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagcgttatctcctgcacacacacacacacacacacacacacacactcacgtt
atggactcctctaagagtcgcggcgctcttcaagacagtacatcggaaaacaacaacaac
aacaacgacggcgacgaggagaaggacgagctgtgtcccgggttccaagacgtggacgcc
ttcgtcaaatatggattgggcgctgtactgtcggccaccaaggcgtccggcgcgttgcct
caagttggagatgagtatgatttctaccggagcttccccggcttccaggagttctgccag
agtcaaggagaccagctcctgcactgcatgagtcagataatgcagtaccacggctgcaga
tctctcatgagagaccggaacaagctgacggggctggaggagagatttgacttggttgtg
gactcaaatgatgccatcctggaacgagcggggatcctccttgatgaagccgatggggtg
aacaggagccagcagcctgtcatgcctgcagggtttcagcctcccaagattgtcgtttcc
agctggaatcgcaagagttcaggctctggcagccgcgccgagacattccgactgctccac
gccaagaacatcgcaaggcctcaactgaaattcagggaaaaagtggacaacagcaacaca
ccttttattcccaagatcttcatcaagcccaacgcagtcaagcccctcccctcttatttt
acaagcaagcaaatctgtaaagagagacctgaggatcttgatgtcccggctgccctggct
gacttcattcaccagcaaagaactcagaaacctgttgaagacatgtttgcacacccatac
caatatgaattggatcatcttacgacaccagaaagccttctgtctaagccagaaccacag
atgtacaaaccaatagctgagaccaattgttccttcatcgattccctggaggatctggtg
gctctgaatgagaagctgtgcagcttgtctgaatttgcagttgaccttgagcaccattcc
taccggagtttcctcggcctcactagcctgatgcagatctccaccagggaggaggatttc
atcatcgacaccttggagctccgtagtgagatgtacatcctgaacgaagctttcactgac
ccgtctattgtcaaggtgtttcacggcgccgactccgacatcgagtggctccagagagac
tttggcttgtatgtagtcaaccttttcgacacgcatcaggccagccgagctttgaacctg
gccagacattccctcgaccacctgctcaaacacttctgcacggtggactcggacaaacgc
taccagctggccgactggaggattcgccccttgccggatgagatggttcagtatgcccgg
acagacacacactatctcctttacatctacgactgtgtgaagacacagctcttggaaact
aaccacgggcagcctggcctgctgcagagcgtctggaacaagagcaaggacatttccttg
aagaaatatgtgaagcctatattcacagaggagtcatatttggagctgcagaggaagcag
aaaaggtctttaaacacccagcagcacactgccttcagactgctgttcgcctggaggaac
aagctggccaggcaggaagatgaaagcaccggatacgtcctgcccacccatatgatgatc
aagatatctgaagagctgcccagagagcctcagggcatcatcgcctgctgtaaccctgtg
cccccactggtgaggcagcagatcaatgagctccattcgttggtgcagcaagcaagagaa
atgcccctccttaaggctgagattgcagctcaaaagacgaagggactcacacccataaaa
aagccagaggtcacattgtttggacctcatgatacctccagggtctcagaaagtgatctc
ccccacttttctcctgatgaactaccagtcaaacagggggtgctcttctcagaggacgag
cacaaaatggatgtggatgatgagaaaaaaagtggtctcctggcacaggctaaaatcact
ctgtttcaggagccggaaacaaagaacgaccaagagtccctttctgttgctcacatgaaa
gccagacggatcattgaggcttttgaaaaccctttcagaatgtatttacccaccagtgat
gtgcacgtcaacgagaatgccaagtttgacccgtcttcaaaaatatttgagattagtaaa
agatggaaactgcagagtattgaacagcaacagaaggagttagaggccaagaggaaagcc
aaggcagatgcaaaggaacagacaaagaaagtggcagaggaaagaaacaaggcaaaacag
agctaccaggagtctctgcaggatgtcgccactgttcgccagcaagcagcggagtctgca
aaaggtggcggcaagaaaagagagcgggtcgccagtgaggttggagagtcgactcccaaa
ccgaccaagaaactgataaaatctgcagagaagccccagaagacagaaccgcctcctcaa
gacagcttcacacctttcgactacagtcagtcagacctcaaagtctttgccgatcccaaa
tcaaaggacaacacacagtttgatccaaaccggcaagcccatgatcctaagaaaaagaaa
aatcccaagggacaaaaatcaaattctgcagctggaaaccgaagtatgtcttacatggct
gggaaatctgaaagaggattccggcataactggcccaaaagatag
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