Scophthalmus maximus (turbot): 118317286
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Entry
118317286 CDS
T09850
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118317286 (ddx19a)
03015 mRNA surveillance pathway
118317286 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118317286 (ddx19a)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118317286 (ddx19a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118317286 (ddx19a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
118317286
NCBI-ProteinID:
XP_035501741
LinkDB
All DBs
Position
3:4331357..4336372
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AA seq
490 aa
AA seq
DB search
MSEDSWALAVDVQEAAVTPPPQLDFSKKVGRLRAACTTREDINGNVVPGRGGDGGRGRDG
GEVVELAEQSLLNKMIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNM
GFNRPSRIQENALPMMLAQPPQNLIAQAQSGTGKTAAFSLAMLSHVNPANKWTQCLCISP
TYELALQIGQVIEHMGQFCPDVKLAYGIRGNRSMERGTKLQQQIVIGTPGTVLDWCTKYK
FIDPKKITMFVLDEADVMIATQGHRDQSLRIHRQLTKDCQMLLFSATFEESVWRFAEQVV
PDPNIIRLKREEETLDNIQQFYVVCKEKEDKFAALCELYGCLTIAQAMIFCHTRSMAAWL
SAQLIREGHQVALLSGEMTVEQRAAVIERFRHGKEKVLVTTNVCSRGIDVEQVSLVVNFD
LPVDMDGHADNETYLHRIGRTGRFGKRGFAVNMVDSERSMDIIHQIEMHFNRRISKLDTS
DYEAMENQLS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggactcgtgggcgctggctgtcgacgtgcaggaggccgccgtgactccgccg
ccacagttggacttttcaaagaaagtgggtcgactgcgtgctgcgtgtaccacgagagag
gacatcaacggcaacgttgtgccggggaggggtggcgatggaggccgcgggagggacggg
ggcgaggtggtggagctggccgagcagtcgctgctcaacaagatgatccgtcgctcgctg
gtgaggaacaggaaccaggtggaggtgctgcagcgggaccccacctccccgctgtactcc
gtcaagacgttcgaggagctgcggctgaaaccggagctgttgaagggagtgtacaacatg
ggcttcaacagaccctccaggatccaggagaacgctctccccatgatgctggctcagcca
cctcagaatctcatcgcccaggctcagtccggcacaggtaaaaccgccgccttttctctg
gccatgctcagccatgtgaacccagccaacaagtggactcagtgcctctgcatctcgccg
acgtatgagcttgcgctgcagatcggtcaggtcatcgagcacatggggcaattttgtccg
gacgtgaaactggcgtacggcattcgaggcaacagaagtatggagcgtggcaccaagctg
cagcagcagattgtcattggaactccgggcacggtcctcgactggtgcaccaagtacaag
tttatcgaccccaagaagatcaccatgttcgtgctggacgaggccgacgtgatgatcgcc
acgcagggtcaccgggaccagagccttcgaatccacagacagctgacgaaggactgccaa
atgctcctgttctccgcaaccttcgaggagtccgtgtggaggtttgccgagcaggtggtt
ccagaccccaatatcatcaggctgaaacgtgaggaggagacgctggacaacatccagcag
ttctacgtggtctgcaaggagaaggaagacaagtttgcggcgctctgcgaactgtacgga
tgcctcaccatcgcacaggccatgatcttctgccacactcgcagtatggctgcttggctg
tctgcacaactgatcagagagggccaccaggtggcgttgctgagtggggagatgactgtg
gagcagagagctgctgtcattgaacgcttccgccacggcaaggagaaagtgctcgtgacc
acgaacgtgtgctccagaggtatcgacgttgagcaggtgtcgctcgtggtcaacttcgac
ctgcccgtggacatggacggacacgccgacaacgagacgtaccttcaccggattggccgc
acagggcgcttcggcaaaagagggtttgccgtcaacatggttgacagcgaacgcagcatg
gatatcatccaccagattgagatgcatttcaaccggagaatctcaaaactggacaccagc
gactacgaagcgatggagaaccagttgagctga
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