Scophthalmus maximus (turbot): 118317368
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Entry
118317368 CDS
T09850
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smau03400
]
118317368 (apex2)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118317368 (apex2)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118317368 (apex2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
118317368
NCBI-ProteinID:
XP_035501893
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Position
3:complement(693108..697359)
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AA seq
562 aa
AA seq
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MKIITWNINGIRTFGGGVKKTLDSLDADVICVQETKVTRDLLDERSAIVDGYNSYFSYSR
GRSGYSGVATYCKDSATPCAAEEGLTGLLTGHEGAVGCYGDHTEFSGEELQLLDNEGRAV
ITQHRVMCEDKVQTVTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLKDGSHVIIL
GDVNTSHRPIDHCDPSDVDQFGENPGRKWLNVFLHQPDEDRNEDEEEEPDEESEGTSTDS
VRGGKFVDTFRYFHPTRSSAFTCWSTLTGARQTNYGTRIDYIFADRRLVREQFVAADIMP
EVEGSDHCPVWGRLRCPLVPSSKPPPLCTRYLPEFAGRQQKLSRFLVKVEPTSVERGELP
GSQEEEERRENLNPLAVGNVSGRKRALASAPVVPKGKKTKTVKTCSKPQGSLLSFFKPKP
TTNAVPAPDAPAGQCDQITSTQNSHKASTTGETVQTDGGSEATEDEGSSQRSCSSTADKH
DRQAKTPQPDRGASSLVFWKSILHGPPPPPSCKVHGEPCVLRTVKKEGPNMGKQFFVCAR
PQGHASNPEARCNFFSWVEKGK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcatcacctggaacattaatggcatcaggaccttcggcggaggcgtcaaaaag
actctggattcactggacgcggatgttatctgtgtccaggagacgaaggtgacgagagac
ctgctggatgagagaagcgccatcgtcgacggatacaactcctacttcagctacagtcga
ggacgcagcggatattcaggggtcgccacgtactgtaaggacagtgccactccgtgtgct
gcagaggagggtctcacaggtctgctgaccggccacgaaggggctgtcggttgctacggc
gaccacacggagttctcgggtgaagagctgcagctgttggacaacgaaggacgagccgtc
atcacacagcacagagtcatgtgtgaggacaaggttcaaacagtgactgtgatcaacgtc
tactgtccacgagcggatcccgacaagccggagagaaaacagttcaaactgcagttctac
aagttgctccagtgtcgggctgaagctctgctgaaagacggcagccatgtgattattttg
ggagatgtgaatacatcccaccggccaatagaccactgtgaccccagtgacgttgatcag
tttggtgagaatcctgggaggaaatggttgaatgtttttttgcaccaaccagacgaggac
aggaacgaggatgaggaggaggagcccgatgaagaatctgagggtacgtcgacagattcc
gtccgtggaggaaaattcgtggacacatttcgctatttccacccgactcgctcaagcgcc
ttcacatgctggtccacgctcaccggagcgcggcagaccaactacggcactcgcatcgac
tacatatttgccgaccgccggctcgtcagggagcagtttgtggcggcagacatcatgccc
gaggtggagggctcggaccactgccccgtgtgggggcgactgcgctgccctctggtgccc
agctccaagcctccgcccctctgtactcgctatctgcccgagtttgctggcaggcagcag
aaactctcccgtttcctggtgaaggtggagccgacgtcagttgagaggggtgagttacct
ggatctcaagaggaggaggagaggagagagaatttaaacccactggcagttggaaatgtc
tcgggtagaaaacgggcattagcatcagctcctgtcgtcccgaaggggaaaaagacaaag
acagtgaagacttgttcgaagccacaaggcagcctcctttcctttttcaaacccaaacca
acgacaaatgctgttcccgctcctgacgctccggccgggcagtgtgaccaaatcacttcg
acacagaactcacacaaagcgtctacaaccggagaaactgtccagacggatggaggatcc
gaagctacagaggatgagggttcctcacagaggagttgcagcagcaccgcagacaaacac
gacagacaggcgaagacgccgcagcccgacagaggagcgtcgtcgctcgtgttctggaag
tcgattcttcacggaccgcctccgccgccctcctgcaaggtccacggggaaccctgtgtg
ctgcgaaccgtgaagaaggaggggccaaacatgggcaagcagttcttcgtgtgcgcccgt
cctcagggccacgcctccaaccccgaggcgcgatgtaacttcttctcctgggtcgagaag
gggaagtga
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