Scophthalmus maximus (turbot): 118317422
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Entry
118317422 CDS
T09850
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118317422 (caprin2)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118317422 (caprin2)
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
118317422
NCBI-ProteinID:
XP_035501984
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Position
12:13481047..13498354
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AA seq
937 aa
AA seq
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MWAELHETTTELQEHKEEQPSEQGGTFKCVELNMVQLAPSAVLDVHSPPECSAKGSEGKE
DPVTAGSPKGGSPTWLNTLQLNLEASTVYHGYETYVEDGLICLKHKVRNLEKKKLKLQEY
KKRLTLGEALNKDQMVAVEKYEEVFYNLDFAQELQKTLGVLTQTLLRAQKKAVKKEQVAK
VEVERRRLSTVLQVQHLLHSLQNEHVRRDVLAGHDQAPHIPAPLLHSLSQLATLLGGQRD
NRLNLVEQMERAAVMYMDLLEGKDKPVAGSTFKLLKEELTRLSDCKYFSRPPPPANKIPE
GSLRSTSNSSSSSDISKSKPNEVSKEKWREDFQVTRERELPDCWDMECPDRSSSPHTVVH
KPWRGAATFIPKGPTKKQSADFKQRKGRKAKVEQNAKLEVHIGTPVEVFNSASALPKDPI
LRRQELEDLMTKIHGSFSFMQDSLLDGEGSPTHGLPGLKRQQTESPSSLAIQADLRSPVD
VLPKTMHSTPLPTRLIERRASLTSEDRCLETCDLELSTRDLPHEPLQLAEKKKGFSSPPL
YLRETTISVHRERSRPCTPESGKQSPCNGVGSCTPTPPQGQTFSTPPARRKLTAAQFQDI
HSVFKVNTALPQNGELNYKPESAVFSEPMYSTASTQTPPEFAPPEDEPHSVYQSDYTVGD
GGQIFLSPGHSGGSMGRPGQYYTRGSPRGMARGSKGLAKGFRASGWHRAAGSYVPQTHLR
DSGPHLYAARDSGYQHRRAGGRNNSSVAWSDSSQVSSPDREGTFTIVDSGHGDSLSVSTV
EVPLTPHSHHPPALLPMQLYPLSQPLRVAFTASRTANFVPGNLDQPIVFDQLYSNLGEMY
DTHIGRFTCPVNGTYVFLFHILKLAINVPLYINLMRNEDVMVSAYANDGAPDHETASNHA
ILPLFQGDQVWLRLHRGAIYGSTWKYSTFSGFLLYQD
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcggagcttcacgaaacaacaaccgagctgcaggagcacaaggaggagcagccg
agcgagcagggcgggacattcaaatgtgtggagctcaacatggtgcagctggccccttcc
gctgtcctggatgttcactcgccacctgagtgttcagcgaagggcagtgaagggaaggag
gaccccgtgactgccggtagcccgaaggggggctcgcccacctggctgaacaccctgcag
ctcaacctagaggcgtccaccgtctaccacggctatgaaacctacgtagaagatggcctc
atctgcctcaaacacaaagtccgcaacttggagaaaaagaagctgaagctgcaagagtac
aagaagagactgaccctgggtgaggcactgaacaaagatcagatggtggctgttgaaaag
tatgaggaggtgttttataacctggactttgctcaggagctacaaaaaaccctgggtgtc
ttgactcagactctgctgagggcccagaagaaggctgtgaaaaaggagcaggtggccaag
gttgaggtggagaggaggcgtctgagcacagtgctccaggtacagcatcttctccacagc
ctgcagaacgagcatgtcaggagagatgtgctggctggacacgatcaggctcctcacatc
ccagctccgctgctgcacagtctgagtcagctcgccaccttgctgggaggccagagggat
aaccgactgaatttagtggaacagatggagagggcagctgtgatgtacatggacctgctg
gaggggaaagacaagcccgtggctgggtccacatttaagttgttgaaagaggagctcacc
aggctgtcagactgcaaatacttcagtcgtcctccacctccagccaacaagattccagag
ggctcactgagatccaccagcaacagcagtagtagtagtgacatatcgaagtcaaaacca
aatgaagtttctaaggagaaatggagggaggacttccaggtcacgagggagcgggagctt
cctgactgctgggatatggagtgcccagatagatccagctcacctcacactgttgtccac
aaaccatggagaggagctgccactttcatccccaaaggtcccaccaagaaacagtctgct
gacttcaaacagagaaaagggaggaaagccaaagtagagcagaatgccaagttggaagta
cacattggcacgcctgtggaggtttttaactctgcgtctgccttacccaaagaccccatc
ctgaggaggcaggagctggaggatctcatgacgaagatccacggctcgttcagtttcatg
caggactcgctcctcgatggtgagggctcgcccactcatggcctccctggactgaagaga
caacagactgaatctccctcttctctggcaatccaggcagacttgagaagccccgttgat
gtcctgcccaaaacgatgcattccaccccactgcccaccaggctcatagagcgcagagcc
agtctgaccagtgaggatcgttgcctggagacctgtgacctggagctttccacaagggac
ctacctcatgagccacttcagttagctgagaaaaaaaagggcttttcctcaccaccgctg
tacctcagggagacgaccatctctgtccaccgggagaggagccgtccatgtacacccgag
tcggggaagcagtccccttgtaatggggtggggtcttgcacccctaccccgcctcaggga
cagacgttctctacaccccctgccaggagaaagctcactgctgcacagtttcaggacatc
cattcagtcttcaaggtgaatacggccttgccccagaatggagaactgaactacaaacca
gaatctgcagttttctctgagcccatgtacagtactgccagtacccaaacaccacctgag
tttgctcccccagaagacgaaccccactccgtgtaccagtcagattatacggtgggagat
ggtgggcagatcttcctgtcccctggccactcaggtggaagcatgggtcgacctggtcag
tactacactcgaggatctccgagaggtatggcacgtggcagcaagggattggcaaaaggc
tttcgtgcttctggttggcatcgagcagcaggatcctatgttccccagactcatctcagg
gactctggacctcacctctatgctgccagagactctggataccaacacagacgtgcaggg
gggaggaataactccagtgtagcctggagtgattcttcacaggtaagtagccctgaccgg
gagggaaccttcaccattgtggactcggggcatggtgattcgctgtcagtatccactgtg
gaggtcccactcactccccacagccaccacccgcctgcactgctgcctatgcagctctac
ccactgtcccagcctctgcgagttgccttcactgcctctcgcactgccaactttgtcccg
ggtaatctggatcagcccatcgtgttcgatcagctctacagcaacctgggagaaatgtac
gacacccacattggccgtttcacctgcccggtcaatggaacctatgtcttcctcttccac
attctgaagcttgccatcaacgtgccactctatatcaatctcatgcgcaatgaggatgtg
atggtgtctgcatatgccaatgacggagccccagatcacgagaccgccagcaaccatgcc
atcctgcctctcttccaaggggaccaagtttggctccgtttacatcgtggtgccatctat
ggcagcacctggaagtacagcaccttctctggcttcctgctctatcaggactga
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