Scophthalmus maximus (turbot): 118317572
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Entry
118317572 CDS
T09850
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118317572 (rbm39b)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
General mRNP proteins
118317572 (rbm39b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Transformer
Motif
Other DBs
NCBI-GeneID:
118317572
NCBI-ProteinID:
XP_035502284
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Position
3:8866261..8873774
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AA seq
524 aa
AA seq
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MADDFDVEAMLEAPYRKDEIKSSHANGHDDQIKKKRRSRSKSRSPGSKKRRSRSKDKKKG
KKRSRSREKKRSRSRERHRSRSRSKERSGRYRARRSPIRKRSKSRSPFKKEKSPISNTPS
KFQVDPMSGYQKREKTDSAIHRQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVG
KVRDVRMISDRNSRRSKGIAYIEFVDTSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAA
AANNLQKGSSGPMRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFIS
FADAECAKKALEQLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRL
QLMARLAEGTGLKIPPAAQQALQMTGSIPFGNIAAPPAVPTPTPSQALNLPSQPLATHCL
QLSNLFNPQAENDPSWANEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMA
TVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPTRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtggaggccatgctggaggctccatacagaaaggatgagatc
aagtcctctcatgcaaacggacatgacgaccaaatcaagaagaaaaggaggagtcgaagc
aaaagtcggagcccaggctctaagaagagaagaagcagaagcaaagacaaaaagaagggt
aagaagaggagccggagccgagagaaaaaacgaagccgcagcagagagcgtcaccgcagc
cgctcccggagcaaggaacgatctgggcggtacagagcacgaaggagccccattcggaaa
cgttctaaaagtcggagccccttcaaaaaagaaaagagtccaatcagtaatacgccctcc
aagttccaagtagatccgatgagtggttatcaaaaacgtgaaaagacagattccgcaatt
cataggcaaccaattgacaatctcacgccagaggagagggacgcccgcacagttttctgc
atgcagctcgctgcgagaatcagagctcgggacctggaagattttttctcagccgtcggg
aaagtcagagacgtgagaatgatctcggacagaaactcgaggcggtcaaagggcatcgcc
tacatagagtttgtggatacttcttctgtaccactggcaattggattgaccggccagagg
cttttaggagttcccatcatcgtccaggcctctcaggctgagaaaaacagagctgcagcc
gccgccaataatctacagaagggcagttcgggtccgatgcgactgtacgtgggctcgctg
catttcaacattactgaggaaatgctacgagggatctttgagccttttggaaagattgag
ggaatccagcttatgatggacagtgagaccggacgatccaaaggatacggcttcatatcg
tttgcagatgctgaatgtgcaaaaaaggccttggagcagctgaatggctttgagctggcc
ggacgcccgatgaaggtggggcatgttacagagcgctcggactcctcgacggccagctcg
ttcctggataacgacgaactagagaggactggcatcgacctcggcaccacagggcgctta
cagctcatggctcgactcgcagaaggaactggtctgaagattcctcctgctgctcaacag
gctctacagatgaccggctccataccttttggaaacatcgctgctccgccagctgttcca
actccaactccaagccaagccttgaacctcccatcacagccgctggccacacactgtctc
cagctgtccaacctgttcaacccacaagcggaaaatgatccgagctgggccaatgagatc
caggacgacgtgatcgaggagtgcaacaaacatggaggaatcgttcacatttatgtggat
aaaaattcagctcaaggtaatgtgtatgtgaagtgtccctcgataccggcagccatggca
actgtaaatgcacttcatggacgctggtttgcaggcaaaatgataacagctgcctacgtc
ccgctccccacctaccacaaccttttccctgactctgtaacggcgaagcagcttctaatg
ccgactcgtcgatag
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