Scophthalmus maximus (turbot): 118317579
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Entry
118317579 CDS
T09850
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118317579 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118317579 (hnrnpa1b)
03041 Spliceosome [BR:
smau03041
]
118317579 (hnrnpa1b)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118317579 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
118317579 (hnrnpa1b)
Spliceosome [BR:
smau03041
]
Common components
Common spliceosomal components
hnRNP proteins
118317579 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
RRM_3
Motif
Other DBs
NCBI-GeneID:
118317579
NCBI-ProteinID:
XP_035502294
LinkDB
All DBs
Position
3:complement(11823552..11827796)
Genome browser
AA seq
346 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEKWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDDAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEEAHL
RDYFEQFGKIEVIDIMTDRSTGKKRGFAFVTFDDHDSVDRIVIQKYHTVNCHNCEVRKAL
TKQEMQTAGMGRSSGGGRPYDYDRGFNQGGGGGGGGGGGGGGGGGRGRYGDGPYNCNGGG
DGGYGGGPGGYNNGGNRGYNQGYNQGGGGGGGYGGNGYDNNGYGNCGGGGGGGGNYNNMG
HYDPQASNFGPMKNNFGGGGGGGRSFGGYGGGSNSGGGYGRQGRNF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagatgtcccacgtgagccggagcagctccgcaagctgttcattggaggtctg
agcttcgagaccacagacgagagcttgcgggcccattttgagaaatggggcagcctcaca
gactgcgtggtcatgagggaccccaacagcaagagatccaggggctttggttttgttaca
tactcgtcagtacaagaagtggacgacgccatgactgctcgtccccataaagttgatgga
agagtggtagagcctaaacgagccgtttccagggaggattcaaaccggcccggcgctcat
gtaacagtcaagaagatatttgttggaggcatcaaggaagacacagaggaggcacacctg
cgagattacttcgagcagtttggcaaaattgaggtcattgatatcatgacggatcgcagt
accggaaagaagaggggctttgccttcgtcaccttcgatgaccatgattcagttgaccgg
attgtcatccagaagtatcacacagtcaactgccacaactgtgaagtgaggaaggccctt
acaaagcaggagatgcagactgcaggaatgggtcgcagcagtggaggtggaaggccttat
gactatgacagaggctttaaccagggtggtggtggtggtggtggtggtggtggcggcggc
ggtggtggtggaggtaggggtagatatggagatggcccttacaattgcaatggaggaggt
gatggtggctatggaggtgggcctggtggatataataatggcggtaaccgcggttataac
caaggctacaaccagggtggaggcggcggtggtggctatggaggaaatggatatgacaac
aatggttacgggaactgtggtggtgggggaggcggcggtgggaactacaataacatgggc
cactacgacccccaggcctctaactttggcccaatgaagaacaacttcggtggcggcggt
ggtggtggcaggagtttcggtggctatggaggtggctcaaacagtggtggcggctatggc
cgtcaaggacggaatttttga
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