Scophthalmus maximus (turbot): 118317687
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Entry
118317687 CDS
T09850
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118317687 (hps3)
Membrane trafficking [BR:
smau04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
118317687 (hps3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
118317687
NCBI-ProteinID:
XP_035502475
UniProt:
A0A8D3BAT1
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Position
13:3902993..3915735
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AA seq
1080 aa
AA seq
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MNSSRRRANMVHVYNCHPYASQQIVQVEQEPRLVCCGGGALFVVATGGCKVEAYSLEQEG
CPLICRFATMGTVRSIQHSKIGDYLVTTEEKNSATYLRAYTNWRHQAEGKARVGVRLLGH
LLRGASVRGGAQMEIIEIPLSERPVAVACCPVTGDLLVGCENTLVLFTLRRQSQQNLQNQ
STQNLQSPWSNAQQSQGQTSGSNLNISILDFERSVIVHLPKITPKQVALCGGYVAVQAEL
EVLVLKLDSSSEPKTLDDSLDTSKNVDRLDDQSDLLFVPRQQELLGDRAKDCDIPVSIEK
TGLEDKGQYTLSYVLFRRFTPEFFQGCSVEETQLHSLQLYPLFTSSQSVSTEEPACVFCF
FSLPNAGYLYSLKGGVELLSAYQYPEKVLEAVLTDQLLHVITKNALQCFTVRCAAVAARI
EDPYIDTTMKACPPCSLEVCALRMQLFIGLRSVCVHGRHVILLSAADTEPPEEAERSTPR
RALELKEHTRLTGIFLAVGIDPATTPALESFLSRPFLSRKWTISSPKETSAAAHGSWNLY
VVGTVPPLALYQEMVEYSRQYAETNPQAQSLRHLLSEAHLLLRAALLQTPEQQRRSGEGD
RTASAGRQTDRQEVEAAFRQNCAQLGDCFSRASQKDCHLALPYYRMSGLPVTEVMARNRP
LSSGPQSHGLGFLFYLKHFLFEETEQSLSQESADEVVDIFSQSDPSELISVCASPSMVNI
GPARTLRILHHLEATAGVSVPLTITMATMMLRLEDLPRYTQLMDRHAEMLLVYGFIDEPR
LLLHGGGGGGGPHTHVRPTALTRQLAKSQPGLLVAGMVALHENNKVQLEQADHIFKELDC
ENCLQVDFWEATLMASSQEAVIQELLFRLASVYIDRLTHTHSPDAQSSLPRASAKRRSLK
SADDLINSCSHYGALYPWLTVLCPAHTTSYQHQEALHKLQSLLCGPSLSVGSVQPLLERL
SEETLWGFSLHLLCATRGGRYDLGIEKLLDRCPQAIIAFANHHLQDKNMALWWQKLLPEL
CDRTRAAADNSILLAALKETLVVVATETSPAQFLELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcaagacgcagagcaaacatggtgcacgtgtacaactgtcatccgtatgcc
tcgcagcagatagtgcaggtggagcaggagcctcgattggtctgttgtggaggcggagcc
ctgtttgtcgtggctactggaggatgcaaggtggaggcgtacagtctggagcaggagggc
tgcccactcatctgtcgcttcgccaccatgggcaccgtgaggagcatccagcacagcaag
ataggagactacctggtgaccaccgaggaaaagaacagcgccacctacctgagggcctac
accaactggagacaccaggccgaggggaaagcccgcgtcggggtgcgtctgctgggccac
ctgctgcgcggggcgtcggtgcggggcggcgcgcagatggagatcatcgagatcccgctg
tcggagcgtcccgtcgccgtggcgtgttgcccggtgacgggggacctcctggtcggctgc
gagaacaccctggttctgttcacactgaggcggcagagccagcagaacctgcagaatcag
agtacgcagaaccttcagagcccctggtcgaacgctcagcagagtcaaggtcagacctcc
ggttcaaacctcaacatttccatcctggactttgaacgctccgtcatcgtgcatcttcca
aagatcacacccaaacaggtggcgctgtgtggaggatatgtagcagtgcaggcagagctg
gaggtgctcgtactcaaactggattcatcctctgaacctaaaaccctggacgactcgttg
gacacaagtaaaaatgtcgatcgcctagacgaccagagtgacctcctgttcgtcccgagg
cagcaggagttgctcggcgaccgggccaaagactgtgacatccccgtcagcatcgagaag
accgggctggaggacaaggggcagtacacgctgtcctatgttcttttcaggcgattcact
ccggagtttttccagggctgcagtgtggaggagacgcaacttcattccctgcagctctat
ccgctcttcaccagttcccagtcggtgtccacagaagaaccggcgtgcgtgttctgcttc
ttctcgctccccaacgccggctacctgtacagcctgaagggcggagtcgagctgctctcg
gcctatcagtatccagagaaggtcctggaggcggtgctaacggaccagctgctgcacgtc
ataacgaagaatgcgttgcagtgtttcacagtgcgctgcgctgcagtggcagccaggatc
gaagacccctacatcgacaccaccatgaaggcctgtccgccctgcagcctggaggtgtgc
gccctcaggatgcagctgttcatcggcctgcgctcggtgtgcgtccacggccgccacgtc
atcctgctctccgccgccgacacggagccgccggaggaggccgagcgcagcacgccgcgc
agggcactcgagttgaaagaacacaccaggctgactggtattttcctggcggtgggaatc
gatccggcaaccacgccggctctggagagctttctgtcgcgccccttcctgagcaggaag
tggacaatctcttcgcccaaagaaaccagtgcggccgcacacggatcatggaacctgtac
gtggtcggcaccgtgccccccctcgctctctaccaagagatggtcgagtacagtcgacag
tacgcggagaccaacccgcaggcccagagcctccggcacctcctcagtgaagctcacctc
ctcctccgcgccgccctgctgcaaacaccggagcagcagcggcggagcggcgagggcgac
cgcaccgcgtccgcaggccgacagacggacagacaggaagtggaggcggcgttcaggcag
aactgtgcacagctgggagactgtttcagcagggcgagccagaaggactgccacttggct
ttaccgtactacaggatgtccggtctgcccgtcaccgaggtcatggccaggaaccgccca
ctttccagcggcccgcagtctcacggcctgggcttcctgttttacctgaagcatttcctc
ttcgaagaaaccgagcagagcctcagccaggaatcagcggacgaggtcgtagacattttt
agccaatcggatccctcggagctcatcagcgtgtgtgccagcccgtctatggtaaacatt
ggccccgcgcggacactgcgcattttgcaccacctggaggccaccgccggcgtgtcagtc
cctctgaccatcaccatggcaaccatgatgctgcgcctggaggacctgccgcgctacacg
cagctgatggacagacacgccgagatgctgctggtgtacggtttcatcgacgagcccagg
ctgctgctccacggcggaggcggaggtgggggcccgcacacacacgtccgtcccacggcg
ctcactcgccagctggccaagtcccagcccgggctactggtggccggcatggtggctctc
catgagaacaacaaagttcagctggaacaggcggaccacatattcaaggagctggactgt
gagaactgcctgcaggtggacttctgggaggcgacgctcatggcctcttcgcaggaagcc
gtcatccaggagctcctgttcaggctggcctccgtctacatcgatcgactgacgcacaca
cactcgccagacgcgcagtccagcctccctcgcgcatctgccaaacgcaggtcgctgaag
agcgccgacgatctgatcaactcgtgctcccattacggcgccctgtacccgtggctcact
gttctgtgtccggcccacactaccagctaccaacaccaggaggcgttacacaaactgcag
tctctgctgtgcggtccgtccttgtccgtcggctccgtccagccgctgctggagcgcctg
tcggaggaaacgctgtggggcttcagcctgcacctcctctgcgccacaagaggggggcgg
tacgacctcggcatcgagaagctgctggacaggtgtcctcaggccatcatagccttcgcc
aatcaccatttacaggacaagaacatggcgttgtggtggcagaagctgctcccagagctc
tgtgaccgaacgagagctgccgctgacaacagcatcctgttggctgcgctaaaagagacg
ctggtggtggtcgccacggagacgagccccgcgcagttcctggagctcatacccgacgac
ggcacggcgtcgtacttcctgccccacctgctcacgtgtagccagagacacttgttggcc
tga
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