Scophthalmus maximus (turbot): 118317752
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Entry
118317752 CDS
T09850
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau02010
ABC transporters
smau04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118317752 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118317752 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smau02000
]
118317752 (abca7)
Transporters [BR:
smau02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118317752 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
Motif
Other DBs
NCBI-GeneID:
118317752
NCBI-ProteinID:
XP_035502596
LinkDB
All DBs
Position
13:complement(8473313..8502004)
Genome browser
AA seq
2391 aa
AA seq
DB search
MGVFRQLFLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRQSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIVCNINNPCFHSPTPGETPGQFGNFDNSILSRLFVDANTVLSYSGNRS
FSGFEDLRESVRRLGERPGAWPVETIEDYMTANETLSTFLLTNSSLSPATVNQLMKARLN
LQVSLAGAQMQLKDLVCNASMLRQFLMVDGGEAVQNDLQTQLCDLPADVLQEAERLFLSQ
LDFTKLFRRDRLMANAGDLRDISRAVTSVSQELAVLVDDFSSLSSFADMSAALRLLSPEN
RTALPRESFRAFSRIMCGHPDVGGERIPSLNWYEDNDIKSFLGKNGTEDTELDRDNSTSP
FCKGLIQGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAIQQVMKEVNKTFEDLQILQQLN
EAWMEVGPRVKRYMESSVEIQLLQNLLRRPEVAILVNMRLENTSWTASRISRFLSTPSPD
APRNPNAAPTWLDVYNDISHTITTLAQVTECFSLNKLEGQESEGKMIDRALELLEDRQFW
AGVVFMLPNSSSPELPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFNDMRYIWGGF
VYVQDLVERAVSRVLTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSVVPFLASAALLIAMLKWGDILPYS
NPTVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTT
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWHNLHSSPLEGDAYSFTMSIVMLYVDAF
IYATAAWYIEAVFPGEYGIPRPWYFIFQLNYWGGVPLEAGLPIPPAPTEQDDDHIEPEPS
DLILGVNIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDKDLIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVRTELD
TLLDNVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSQLGSGYYLTVVKRE
GLETSNPSNTSICTSTSFSKTKLPPPKDSESSLSEDTGLGSEASSSYLAALLALAQHHIP
GARLVEESGREAVINLPQVAAKNSSLAIFLSELDQRLPELGISSYGLSDSTLEEIFLRVA
EETGVDAEPVLQAESPHRRQQSAGQRMERQQAEEPETGRKRLRKQEPLETDLLSGDGRGG
IPLTGWWLTWQQLRALFVKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYPA
LHLQPWMYGQQFTFFSNDAPGNTAMENLLEALLDQPGFGTKCMETEEDDNSTSAQCEGEQ
VGLFMRPQVSYSTWQMFSRGNWSIDRPSPKCLCSTEDVRRMLPDCPQGAGGLPPPQIRRL
TGDVLQNLTTYNVSDYLVKTYSQILKKSMKTKKWVNEFRYGGFSLGGRATQTLPQAQRVQ
DSIMAIRTRYRVPQNSSLNNLLNRLPDILGGLNSQNNVKVWYNNKGWHAMVSFVNVMNNG
LLRASLPPGPERTRHGITAYNHPLNLTKEQLTEMALMTTSVDVLVSICVIFAMSFVPASF
VLFLIEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSE
TNLPALVLLLLFYGWSITPLMYPASFLFTVPSTAYVVLTSINLFIGINGSVATFVLELFV
DEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGSKQTLDPLQWDFVGKN
LFAMAAQGVIFFIFTILLQYKFFIHFRPWWAEPEMPPLGPEDEDVARERERVKSGKAQSD
ILTMTDLSKVYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITFGEA
SLNHHSVVTEMEQVHKLMGYCPQFDAISDLLTGQEHLELYARLRGIQEDSVTKVAQWGVK
KLGLTQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCIVSV
TKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLADTKS
DTDSCPVSTYMESSFPSIELKERHHSVLQYQLPAHACCLARVFDVLANNYEELGIVDFSV
SQTTLDQVFVNFAKEQTDDDCLTDVVISNGTAETNLSVLPTRINPPTIQPHPPVTPPRQS
KAAQQHALSSDGKPKEGKSKKAKSSKGKSKEGKSSGEKSSSMAMTKLPQPAEKDQELPQT
SRRGSSASDSSNGGVQAESSKSRRSKHRAQSSSKDPSALFIVGSNSQDSVL
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atgggggttttcagacagctcttcctcctgctctggaaaaacatcacataccgcaggagg
aacaagatccaactgatcatcgagcttctctggccactcttcctctttgtcatcctcatc
tctgttcgtcagtcacacccgccttacaaacagagccaatgtcactttccaaacaaagcc
ctgccctctgcgggcaccttgccctggattcaggggatcgtctgcaacatcaacaacccc
tgcttccacagcccgacaccaggggagaccccaggacaatttggcaactttgacaactcc
atactgtctcgtctcttcgtggacgccaacactgttctgtcctatagtggaaaccggagc
ttctctggctttgaggacctgagggagagtgtccggaggctgggcgagagacctggagct
tggccagtcgaaacaatagaagattacatgacagccaatgagacgctttccaccttcctc
ctgaccaacagcagcctgtcgcctgcaaccgtcaaccagctgatgaaggctcgtctcaac
ttacaggtttctctggctggagctcagatgcagctcaaggacttggtgtgtaacgcaagc
atgttaagacagtttctgatggtggacggaggagaagccgtccagaatgatcttcagact
cagctgtgtgacctgcctgctgacgtcctgcaagaggccgagcgcctttttctctctcag
ctcgacttcaccaaattgttcaggagagaccgtctgatggccaacgctggagacctcagg
gacatcagccgggccgtcacctcagtttcgcaggagctggctgtcctcgtggatgatttt
tcctccctctccagctttgcagacatgagcgcagctcttcgtcttctgtctcctgagaat
cgcacggcgctgcccagagagagtttccgagctttttcgaggatcatgtgcggtcacccc
gacgttggaggtgaacgcatcccgtcactcaattggtatgaagacaatgacatcaagtcc
ttcttaggcaaaaacggcactgaagacaccgagctggaccgtgacaacagcaccagtccg
ttctgtaaaggtctgatccagggtctggagtccaaccctctgtcacgcattgtgtggaga
ggaatcaaacctctctttattggaaaactactttacacaccagacactcctgcaatacag
caagtcatgaaagaggtgaacaaaactttcgaggacctgcagatccttcagcagctgaat
gaagcctggatggaggtgggaccacgagtcaagcgctacatggagagcagcgtagagatt
caactcctgcagaatctgttgaggcggccagaggttgcaatactggtcaacatgcgtttg
gaaaacacttcctggacggcctcgcggatctctcgtttcctgtccacaccctcgccagac
gcccctaggaatcctaatgcagcccctacctggctggacgtctacaacgacatcagccac
acaatcaccactctcgcacaagtcactgagtgtttctctctgaacaaactggaggggcag
gagagtgagggtaagatgattgacagagcactggagctactcgaggacaggcagttttgg
gcaggtgtagttttcatgctgcccaactcttcatctcctgagctgccgccccatgtcacc
tacaagatccgaatggacatcgatgatgtgacccggacaaacaagatcaaggacaggttt
tgggatccgggcccagcagctgacccatttaatgacatgcgctacatttggggcggcttc
gtttacgtccaggacctggtggaaagagctgtgagccgagtcctgactggagttcaacag
actacaggcatctacatccagcagatgccctacccctgctatgtggatgatgttttcctc
cgggtgctgaaccgctccctgcctctcttcatgactttggcctggatctactcggttgcc
atgatcatcaaaggcgtggtatacgagaaggaggcaaggctgaaggaaaccatgaggatt
atgggtctgggaacgggaacgctgtggctcagctggttcatcagcagcgtggttcctttc
ctggcctctgcagcgcttctcattgctatgctcaagtggggggacattttgccatacagc
aacccgacggttgtctttttcttcctcatggcgtttgccactgccaccatcatgcagtgt
ttcctcattagtaccttcttctccaaagccaacctggctgctgcctgtggggggctcata
tactttagcctctatttgccctatgtactgtgtgttgcctggagagaccacctcaccacc
acacacagagtcctcgctagttttctctctcctgtggcatttgggtttggctgtgagtat
ttctctcagtacgaggagcaaggtgtgggcatccagtggcacaacctgcactccagcccg
ttggaaggagacgcctacagcttcactatgtctattgtcatgctctatgtggacgccttc
atctacgccactgcagcctggtacatcgaagctgtgttccctggtgaatatgggatccct
aggccttggtatttcatcttccagcttaactactggggtggagttccactggaggcaggt
ctaccgatcccgccggcacctacagagcaggatgacgatcacattgaaccagagcccagt
gacttgatcctgggcgtgaacatcagaaacctggtgaaaatctacaagaagggagccaaa
ctggctgtcaaccacctcaacctgaagttttatgagggacagatcacctcgttcctcggc
cacaacggagctggcaagaccaccaccatatctgtcctgacgggcctgtttccacctacc
tctgggaccgtgtacatcaagggaatggacattcgccatgacaaggatctcatccgaagg
acgctgggagtctgtccacaacacaatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatggatgtctgaagggtttgtctgaagcagaggtgagaactgagctggac
actctgctggacaacgttggccttctgcataaacgacatgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggcgatagcatttgttggaggatctaaggtggtt
gttttggatgaacctacagctggagttgatccttactcgcgcagagggatctgggatctg
ttgctcaaatatcgcaaagaccggactatcatcttgtccactcactacatggacgaggca
gagctgttaggtgacaggatcgccatcatctcccaggggaagctctgctgctgcggctca
ccgctcttcctgaaatcccagctgggatctggttattacctcactgtggtgaagcgggaa
ggactggaaaccagcaatcccagcaataccagtatctgcactagtaccagcttcagcaaa
accaagcttcctcctcccaaggacagcgaatcatcattgagtgaagacactgggctgggt
agtgaagcaagcagctcatacctggcggcgttgctcgccctggcacagcaccacatcccg
ggtgcgagactggtggaggagtcagggcgcgaggcggtgattaacctgccgcaggtggct
gctaagaacagtagcctggccatctttctgtccgaactggatcagaggcttcctgaactg
ggcatcagcagctacggcctttcagacagcacactggaggagatttttctgcgggtggca
gaggaaactggcgtggatgctgaacctgtgctccaggccgaatctccccaccgccgacag
caatcagcagggcagagaatggagagacaacaagctgaagaaccagagacaggaaggaaa
aggcttcgtaagcaagaaccactggagacagacctgctgagcggagacggtcgaggtggg
atccccctgaccggatggtggctgacgtggcagcagctgagggctctctttgtcaaacgc
tggctttacgcccggaggagccgcaggggcttctttgctcagattgttctgccggctgtg
tttgtcctggttgccctcctcttcagcctcatcgtacctccattcgggaagtaccctgcc
ctgcacctgcagccctggatgtacggacaacagttcaccttcttcagcaacgacgccccc
gggaacacagccatggagaacttgttggaagctttgctcgaccagccaggctttggtacc
aaatgcatggagacagaggaagacgacaacagcacgagtgctcagtgtgaaggggagcag
gttggcctgttcatgcgaccacaggtttcctactccacctggcagatgttcagcagagga
aactggagcatagacagaccctctcctaaatgtctgtgtagcacagaggacgtccgccgg
atgctcccagactgtccacagggtgccggtgggctgccacctccacagatcaggagattg
actggagacgtcctccaaaatctaacaacttataacgtttccgattacctggtgaaaacc
tactctcagatcctcaagaaaagcatgaaaaccaagaagtgggtgaatgaattcagatat
ggaggcttctccctggggggcagagccacccagactttacctcaggcccaacgtgtccaa
gactcgatcatggctatcaggactcgttacagagttccacagaacagttcactgaataat
cttcttaaccgactgccggatattctcggaggactgaacagtcaaaacaatgttaaggtg
tggtacaataacaaaggctggcatgccatggtgtcatttgtcaacgtgatgaacaatggc
ctgctgagagcaagtctacccccagggccagagaggacgagacacggcatcactgcttac
aaccacccgctcaacctcaccaaagagcaactcaccgaaatggccttgatgactacatca
gtggatgttctggtttccatctgcgtcatctttgccatgtcctttgtgccggccagtttt
gtcctttttctgatcgaggagcgagtcagcaaagccaaacaccttcagtttgtcagcggg
gtcaaaccgatcctctactggctggccaacttcacctgggacatgttgaactacaccgtc
ccagccaccatggtggtgctgatcttcatttgcttccagcagcagtcatatgtttctgag
acaaacctgcccgctctcgtcctgctgctccttttttatgggtggtccatcacccctctc
atgtacccagcctcctttttgttcactgtcccgagcacagcttatgtcgttctgacctcc
atcaacctcttcattggaatcaacggcagcgtcgccaccttcgtcctggagctgtttgta
gacgagcatctgaacgaggtgaaccggatcctgaagaaggttttcctaatcttccctcat
ttctgtctgggacgaggactcatcgacatggccaaaaatcaggccatggcagacgccttc
cagagactgggcagcaaacagactctggatccgctgcagtgggattttgttggaaagaac
ttgtttgcaatggcggcccagggtgttatcttcttcatcttcaccatactgctgcagtac
aagtttttcatacacttcaggccgtggtgggcggagcctgagatgcctccccttggtccg
gaagacgaggacgttgccagggagagagagagggtcaaaagtggcaaagcccaatcagac
atcctcaccatgacggacctgagcaaggtctataaagcaggcaggaagccggcggtggat
cgtctctgcctcgggattccacgtggcgagtgcttcggcctgcttggggtgaacggagca
gggaagacttcgacatttcgcatgctgaccggagacacacccatcacctttggagaggcg
tccctcaaccaccacagtgtggtgacagagatggagcaggtccacaagctgatgggttac
tgtccacagtttgacgccatcagcgacctgctgacaggtcaggaacatctggagctgtac
gcccgcctgcgggggattcaggaagactctgttaccaaggtggcgcagtggggggtgaag
aagctggggctgacacagtacgctgagcgggaggccggaggctacagtggaggcaacaag
aggaaactctcaactgccatctcactgattggggcaccacctgttatattcctggatgag
cccaccactggtatggacccaaaagccaaaaggtttttgtggaactgcattgtcagcgtc
accaaagagggaagagctgtagttctcacctcccacagtatggaggaatgtgaggccctc
tgcaccagaatggccatcatggtcaacggcaggttccagtgtctgggatctgttcaacac
ctgaagaacaggtttggcgacggctacaccatcgttcttcgcctggcagacaccaagtcc
gacacagactcgtgtcctgtcagcacctacatggagagctctttccccagcatcgagctg
aaggagcgtcaccacagcgtgctgcagtaccagctgcccgcgcacgcctgctgcctggct
cgcgtcttcgacgtgctggccaacaactacgaggagctgggcatcgtagacttctccgtg
tcacagaccaccctggaccaggtgtttgtcaactttgccaaagagcaaactgacgatgac
tgcctcacagatgtggtcatcagcaacgggacagcagagaccaacctgtcggtgctgccc
accaggattaaccctcccaccatccaaccgcatccgccagtcacaccccctcggcaaagc
aaggctgcacagcagcatgcactgtcatctgacggcaagccgaaagagggcaaatcaaaa
aaggccaaatctagcaagggtaaatctaaagagggcaaatctagcggagaaaaaagcagc
agtatggcaatgaccaaattacctcagcctgcagagaaagaccaggagctgcctcagacg
agccggaggggcagcagtgcatcagacagcagcaatggaggagttcaggcagaatccagt
aaatctagaaggtccaaacaccgagcacagagctccagtaaagatccgtcggcacttttt
atagtcggcagcaactcacaagacagtgtgctgtga
DBGET
integrated database retrieval system
