Scophthalmus maximus (turbot): 118317860
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Entry
118317860 CDS
T09850
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03320
PPAR signaling pathway
smau04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
118317860 (rxrgb)
03320 PPAR signaling pathway
118317860 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118317860 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118317860 (rxrgb)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118317860 (rxrgb)
Nuclear receptors [BR:
smau03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
118317860 (rxrgb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
118317860
NCBI-ProteinID:
XP_035502812
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Position
13:14358485..14388527
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AA seq
501 aa
AA seq
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MCLASSQCQIAPEGMWQPMASPATGASPGRDIGYGHYSFCAVRHESCVGGTKYSTGPMST
AHNHPPHMGGMVGHPSVISTSRHLPSPMSSLGSPMNGLASPYPVITSSLGSPSVSLPSTP
HMNFGQLSSPQMNSMNSVSSSEDIKPPPGLQNMGNINYQCTSPGGMSKHICAICGDRSSG
KHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQRNRCQYCRYQKCLAMGMKREG
VYVRAAVQEERQRGKERGESEVESTSSFNEDMPVDKILDAEVAVEPKTETYSDGSPGNST
NDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVK
DGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAK
GLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKL
IGDTPIDTFLMEMLEAPHQIT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctggcttccagccagtgccaaattgcacctgaaggcatgtggcaacccatggca
tcacctgcaactggagcgagccctgggagggacataggttatggtcactactctttctgt
gctgttcgacatgagtcctgcgtaggcggcacaaaatactctacggggccaatgagcaca
gcccacaaccacccgcctcacatgggtggcatggtgggacacccgtcggtcatcagcacc
tccaggcacctgccgtcccccatgtcctccctgggctcgcccatgaatggcctggcctca
ccctaccccgtcattacatcgtctctgggctccccctctgtatcgctgccgtccacgccc
cacatgaacttcggacagctcagcagtccacagatgaactctatgaacagtgttagcagc
tcggaggacatcaagcctccgccagggctacagaacatgggaaacatcaactaccagtgt
acaagccccgggggaatgtcaaagcacatctgcgccatttgcggggaccgctcctcagga
aagcattacggcgtgtacagctgtgagggatgcaagggcttcttcaagaggaccgtccgt
aaagatctcacttacacatgtcgagacagcaaggagtgcctgattgacaagcgccagcga
aaccgctgccaatactgtcgttatcagaagtgcctggccatgggcatgaagagagaaggt
gtgtatgtccgtgcagcggtgcaggaagagaggcagcgtgggaaggagcggggcgagagc
gaggtggagtctaccagcagtttcaacgaggacatgcccgtggacaagatcctggatgct
gaggtggctgtggagcccaaaacagagacgtacagcgacggcagccccggaaactctacc
aacgaccccgtcaccaatatctgccaagcagcagacaagcagctcttcaccctggtggag
tgggccaaacggatcccgcacttctccgacctccccctcgacgatcaggtcatcctacta
agagcaggctggaacgagctgctcatcgcttcattctcgcatcgctctgtcacggttaaa
gatggcatcctgttggcgacgggcctccacgtccacagaagcagtgcccacagtgctgga
gtgggctccatctttgatagagttctgacagagttggtatctaaaatgaaagatatgcag
atggataagacagagctcggctgcctgcgcgccattgtcctcttcaatccagatgcaaaa
ggtctttcaaacccacccgaagttgagggtctgagggaaaaagtatacgcttcattggag
tcatatacaaaacagaaataccccgaccagcccggcagatttgccaaactgctgcttcgc
ctgcccgccctgcgctccatcggcctcaagtgcctggagcatctattcttcttcaagcta
atcggggacacgcccatcgacaccttcctgatggagatgctggaggcgccgcatcagatc
acatga
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